RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 NKAPP1Q8N9T2 125 aa7.44□□□□□ -1.22
HSPG2-212ENST00000493940 KRTAP13-2Q52LG2 175 aa7.43□□□□□ -1.22
HSPG2-212ENST00000493940 M0R378 163 aa7.42□□□□□ -1.22
HSPG2-212ENST00000493940 SERF1AO75920 110 aa7.42□□□□□ -1.22
HSPG2-212ENST00000493940 RPL28P46779 137 aaKnown RBP7.42□□□□□ -1.22
HSPG2-212ENST00000493940 COX17Q14061 63 aa7.42□□□□□ -1.22
HSPG2-212ENST00000493940 HSBP1O75506 76 aa7.41□□□□□ -1.22
HSPG2-212ENST00000493940 SMIM13P0DJ93 91 aa7.41□□□□□ -1.22
HSPG2-212ENST00000493940 TSPEAR-AS2P59090 65 aa7.41□□□□□ -1.22
HSPG2-212ENST00000493940 PRLHP81277 87 aa7.41□□□□□ -1.22
HSPG2-212ENST00000493940 TMEM126AQ9H061 195 aa7.41□□□□□ -1.22
HSPG2-212ENST00000493940 H0Y8G0 127 aa7.4□□□□□ -1.22
HSPG2-212ENST00000493940 LINC00158P58513 81 aa7.4□□□□□ -1.22
HSPG2-212ENST00000493940 PMCHL2Q9BQD1 86 aa7.4□□□□□ -1.22
HSPG2-212ENST00000493940 TSPAN13O95857 204 aa7.39□□□□□ -1.23
HSPG2-212ENST00000493940 FABP4P15090 132 aa7.38□□□□□ -1.23
HSPG2-212ENST00000493940 RPL13AP40429 203 aaKnown RBP7.38□□□□□ -1.23
HSPG2-212ENST00000493940 UBE2AP49459 152 aa7.38□□□□□ -1.23
HSPG2-212ENST00000493940 FAM19A1Q7Z5A9 133 aa7.38□□□□□ -1.23
HSPG2-212ENST00000493940 LEPROTL1O95214 131 aa7.37□□□□□ -1.23
HSPG2-212ENST00000493940 RPL24P83731 157 aaKnown RBP7.37□□□□□ -1.23
HSPG2-212ENST00000493940 CRYGAP11844 174 aa7.36□□□□□ -1.23
HSPG2-212ENST00000493940 MIR7-3HGQ8N6C7 128 aa7.36□□□□□ -1.23
HSPG2-212ENST00000493940 TYMSOSQ8TAI1 123 aa7.36□□□□□ -1.23
HSPG2-212ENST00000493940 PLEKHB2Q96CS7 222 aa7.36□□□□□ -1.23
HSPG2-212ENST00000493940 NDUFA12Q9UI09 145 aa7.36□□□□□ -1.23
HSPG2-212ENST00000493940 SFTA2Q6UW10 78 aa7.35□□□□□ -1.23
HSPG2-212ENST00000493940 DAND5Q8N907 189 aa7.35□□□□□ -1.23
HSPG2-212ENST00000493940 MUC2Q02817 5179 aa7.35□□□□□ -1.23
HSPG2-212ENST00000493940 NCR3O14931 201 aa7.34□□□□□ -1.23
HSPG2-212ENST00000493940 PRR4Q16378 134 aa7.34□□□□□ -1.23
HSPG2-212ENST00000493940 BOD1L2Q8IYS8 172 aa7.34□□□□□ -1.23
HSPG2-212ENST00000493940 LEPROTO15243 131 aa7.33□□□□□ -1.24
HSPG2-212ENST00000493940 EIF4EBP3O60516 100 aaPredicted RBP7.33□□□□□ -1.24
HSPG2-212ENST00000493940 MEIG1Q5JSS6 88 aa7.33□□□□□ -1.24
HSPG2-212ENST00000493940 C3orf22Q8N5N4 141 aa7.33□□□□□ -1.24
HSPG2-212ENST00000493940 KRTAP4-16G5E9R7 235 aaPredicted RBP7.32□□□□□ -1.24
HSPG2-212ENST00000493940 HERV-K104P63124 156 aa7.32□□□□□ -1.24
HSPG2-212ENST00000493940 MYMXA0A1B0GTQ4 84 aa7.31□□□□□ -1.24
HSPG2-212ENST00000493940 HIST1H2BKO60814 126 aa7.31□□□□□ -1.24
HSPG2-212ENST00000493940 HIST1H2BJP06899 126 aa7.31□□□□□ -1.24
HSPG2-212ENST00000493940 HIST1H2BOP23527 126 aa7.31□□□□□ -1.24
HSPG2-212ENST00000493940 HIST1H2BBP33778 126 aa7.31□□□□□ -1.24
HSPG2-212ENST00000493940 SPRR1AP35321 89 aa7.31□□□□□ -1.24
HSPG2-212ENST00000493940 HIST1H2BDP58876 126 aa7.31□□□□□ -1.24
HSPG2-212ENST00000493940 HIST1H2BCP62807 126 aa7.31□□□□□ -1.24
HSPG2-212ENST00000493940 HIST2H2BEQ16778 126 aa7.31□□□□□ -1.24
HSPG2-212ENST00000493940 FAM229BQ4G0N7 80 aa7.31□□□□□ -1.24
HSPG2-212ENST00000493940 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.31□□□□□ -1.24
HSPG2-212ENST00000493940 HIST1H2BHQ93079 126 aa7.31□□□□□ -1.24
HSPG2-212ENST00000493940 HIST1H2BNQ99877 126 aa7.31□□□□□ -1.24
HSPG2-212ENST00000493940 HIST1H2BMQ99879 126 aa7.31□□□□□ -1.24
HSPG2-212ENST00000493940 LOC107984156A0A0G2JMH3 177 aa7.3□□□□□ -1.24
HSPG2-212ENST00000493940 TRBV10-3A0A0K0K1G6 114 aa7.3□□□□□ -1.24
HSPG2-212ENST00000493940 J3QQQ9 107 aa7.3□□□□□ -1.24
HSPG2-212ENST00000493940 DPM2O94777 84 aa7.3□□□□□ -1.24
HSPG2-212ENST00000493940 ARL17AQ8IVW1 177 aa7.3□□□□□ -1.24
HSPG2-212ENST00000493940 RETNLBQ9BQ08 111 aa7.3□□□□□ -1.24
HSPG2-212ENST00000493940 HIGD2AQ9BW72 106 aa7.3□□□□□ -1.24
HSPG2-212ENST00000493940 KCNQ1DNQ9H478 68 aa7.3□□□□□ -1.24
HSPG2-212ENST00000493940 IGKCP01834 107 aa7.29□□□□□ -1.24
HSPG2-212ENST00000493940 ADAMTSL4-AS1Q5T5F5 129 aa7.29□□□□□ -1.24
HSPG2-212ENST00000493940 SOSTDC1Q6X4U4 206 aa7.29□□□□□ -1.24
HSPG2-212ENST00000493940 HSPB8Q9UJY1 196 aa7.29□□□□□ -1.24
HSPG2-212ENST00000493940 PLNP26678 52 aa7.28□□□□□ -1.24
HSPG2-212ENST00000493940 SMCR5Q8TEV8 140 aa7.28□□□□□ -1.24
HSPG2-212ENST00000493940 SPRR4Q96PI1 79 aa7.28□□□□□ -1.24
HSPG2-212ENST00000493940 PRYO14603 147 aa7.27□□□□□ -1.25
HSPG2-212ENST00000493940 KRTAP9-2Q9BYQ4 174 aa7.27□□□□□ -1.25
HSPG2-212ENST00000493940 MUC17Q685J3 4493 aa7.26□□□□□ -1.25
HSPG2-212ENST00000493940 ERC2-IT1O76042 136 aa7.26□□□□□ -1.25
HSPG2-212ENST00000493940 LINC00337Q8N6G1 96 aa7.26□□□□□ -1.25
HSPG2-212ENST00000493940 LINC00304Q8N9R0 145 aa7.26□□□□□ -1.25
HSPG2-212ENST00000493940 IGKV2D-26A0A0A0MRZ7 120 aa7.25□□□□□ -1.25
HSPG2-212ENST00000493940 A0A0J9YXY3 114 aa7.25□□□□□ -1.25
HSPG2-212ENST00000493940 B5MCH6 92 aa7.25□□□□□ -1.25
HSPG2-212ENST00000493940 SYS1-DBNDD2H3BUS1 97 aa7.25□□□□□ -1.25
HSPG2-212ENST00000493940 NPC2P61916 151 aa7.25□□□□□ -1.25
HSPG2-212ENST00000493940 MAP1LC3CQ9BXW4 147 aa7.25□□□□□ -1.25
HSPG2-212ENST00000493940 LINC00587B1AMM8 73 aa7.24□□□□□ -1.25
HSPG2-212ENST00000493940 E9PLD3 99 aa7.24□□□□□ -1.25
HSPG2-212ENST00000493940 S100A6P06703 90 aa7.24□□□□□ -1.25
HSPG2-212ENST00000493940 COA6Q5JTJ3 125 aaKnown RBP7.24□□□□□ -1.25
HSPG2-212ENST00000493940 Q9BRP9 147 aa7.24□□□□□ -1.25
HSPG2-212ENST00000493940 TTTY13Q9BZ97 58 aa7.24□□□□□ -1.25
HSPG2-212ENST00000493940 PPDPFQ9H3Y8 114 aa7.24□□□□□ -1.25
HSPG2-212ENST00000493940 LGALS3P17931 250 aaKnown RBP7.23□□□□□ -1.25
HSPG2-212ENST00000493940 LITAFQ99732 161 aa7.23□□□□□ -1.25
HSPG2-212ENST00000493940 A0A0U1RQV1 116 aa7.22□□□□□ -1.25
HSPG2-212ENST00000493940 ETDCA0A1B0GVM5 59 aa7.22□□□□□ -1.25
HSPG2-212ENST00000493940 DDTP30046 118 aa7.22□□□□□ -1.25
HSPG2-212ENST00000493940 NMUP48645 174 aa7.22□□□□□ -1.25
HSPG2-212ENST00000493940 HERVK_113P61574 105 aa7.22□□□□□ -1.25
HSPG2-212ENST00000493940 LINC01545Q5VT33 79 aa7.22□□□□□ -1.25
HSPG2-212ENST00000493940 TRBV10-2A0A0K0K1G8 114 aa7.21□□□□□ -1.26
HSPG2-212ENST00000493940 IGLV6-57P01721 117 aa7.21□□□□□ -1.26
HSPG2-212ENST00000493940 C3orf79P0CE67 100 aa7.21□□□□□ -1.26
HSPG2-212ENST00000493940 TMA7Q9Y2S6 64 aaKnown RBP7.21□□□□□ -1.26
HSPG2-212ENST00000493940 NDUFC2O95298 119 aa7.19□□□□□ -1.26
HSPG2-212ENST00000493940 LINC00483Q53H64 154 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms