RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 PYY3Q5JQD4 70 aa4.82□□□□□ -1.64
VEGFA-214ENST00000493786 C9orf129Q5T035 196 aaKnown RBP4.82□□□□□ -1.64
VEGFA-214ENST00000493786 PCP2Q8IVA1 136 aa4.82□□□□□ -1.64
VEGFA-214ENST00000493786 NKAPP1Q8N9T2 125 aa4.82□□□□□ -1.64
VEGFA-214ENST00000493786 TTTY13Q9BZ97 58 aa4.82□□□□□ -1.64
VEGFA-214ENST00000493786 SND1-IT1Q9HBX3 110 aa4.82□□□□□ -1.64
VEGFA-214ENST00000493786 M0QXV9 152 aa4.81□□□□□ -1.64
VEGFA-214ENST00000493786 COPS9Q8WXC6 57 aa4.81□□□□□ -1.64
VEGFA-214ENST00000493786 KIAA1109Q2LD37 5005 aa4.81□□□□□ -1.64
VEGFA-214ENST00000493786 A0A1W2PNN7 141 aa4.8□□□□□ -1.64
VEGFA-214ENST00000493786 FAM168BA1KXE4 195 aa4.8□□□□□ -1.64
VEGFA-214ENST00000493786 FAM229AH3BQW9 127 aa4.8□□□□□ -1.64
VEGFA-214ENST00000493786 COX8AP10176 69 aa4.8□□□□□ -1.64
VEGFA-214ENST00000493786 UBE2BP63146 152 aa4.8□□□□□ -1.64
VEGFA-214ENST00000493786 LBHQ53QV2 105 aaPredicted RBP4.8□□□□□ -1.64
VEGFA-214ENST00000493786 BOD1L2Q8IYS8 172 aa4.8□□□□□ -1.64
VEGFA-214ENST00000493786 DAND5Q8N907 189 aa4.8□□□□□ -1.64
VEGFA-214ENST00000493786 PLA2G2DQ9UNK4 145 aa4.8□□□□□ -1.64
VEGFA-214ENST00000493786 APOBP04114 4563 aaKnown RBP4.8□□□□□ -1.64
VEGFA-214ENST00000493786 SMR3BP02814 79 aaPredicted RBP4.79□□□□□ -1.64
VEGFA-214ENST00000493786 NPC2P61916 151 aa4.79□□□□□ -1.64
VEGFA-214ENST00000493786 SERTAD4-AS1Q5TG53 156 aa4.79□□□□□ -1.64
VEGFA-214ENST00000493786 SLC25A34Q6PIV7 304 aa4.79□□□□□ -1.64
VEGFA-214ENST00000493786 Q6ZVH6 145 aa4.79□□□□□ -1.64
VEGFA-214ENST00000493786 LINC00528Q8N1L1 170 aa4.79□□□□□ -1.64
VEGFA-214ENST00000493786 TP73-AS1Q9UF72 201 aa4.79□□□□□ -1.64
VEGFA-214ENST00000493786 DNAH8Q96JB1 4490 aa4.79□□□□□ -1.64
VEGFA-214ENST00000493786 DLEU1O43261 78 aa4.78□□□□□ -1.64
VEGFA-214ENST00000493786 PLA2G1BP04054 148 aaKnown RBP4.78□□□□□ -1.64
VEGFA-214ENST00000493786 SRSF9Q13242 221 aaKnown RBP eCLIP4.78□□□□□ -1.64
VEGFA-214ENST00000493786 ADAMTSL4-AS1Q5T5F5 129 aa4.78□□□□□ -1.64
VEGFA-214ENST00000493786 PHF5AQ7RTV0 110 aaKnown RBP4.78□□□□□ -1.64
VEGFA-214ENST00000493786 MRPL55Q7Z7F7 128 aaKnown RBP4.78□□□□□ -1.64
VEGFA-214ENST00000493786 C14orf144Q96I85 54 aa4.78□□□□□ -1.64
VEGFA-214ENST00000493786 SPANXDQ9BXN6 97 aa4.78□□□□□ -1.64
VEGFA-214ENST00000493786 SPANXCQ9NY87 97 aa4.78□□□□□ -1.64
VEGFA-214ENST00000493786 C22orf24Q9Y442 160 aa4.78□□□□□ -1.64
VEGFA-214ENST00000493786 IGLV5-37A0A075B6J1 123 aa4.77□□□□□ -1.65
VEGFA-214ENST00000493786 EPM2AB3EWF7 344 aa4.77□□□□□ -1.65
VEGFA-214ENST00000493786 NCR3O14931 201 aa4.77□□□□□ -1.65
VEGFA-214ENST00000493786 VPREB1P12018 145 aa4.77□□□□□ -1.65
VEGFA-214ENST00000493786 IFITM1P13164 125 aa4.77□□□□□ -1.65
VEGFA-214ENST00000493786 RPL37AP61513 92 aaKnown RBP4.77□□□□□ -1.65
VEGFA-214ENST00000493786 LINC00308Q8TCZ7 52 aa4.77□□□□□ -1.65
VEGFA-214ENST00000493786 LITAFQ99732 161 aa4.77□□□□□ -1.65
VEGFA-214ENST00000493786 LOC107984156A0A0G2JMH3 177 aa4.76□□□□□ -1.65
VEGFA-214ENST00000493786 GAGE10A6NGK3 116 aa4.76□□□□□ -1.65
VEGFA-214ENST00000493786 M0R378 163 aa4.76□□□□□ -1.65
VEGFA-214ENST00000493786 NDUFC2O95298 119 aa4.76□□□□□ -1.65
VEGFA-214ENST00000493786 Q5VSD8 79 aa4.76□□□□□ -1.65
VEGFA-214ENST00000493786 ARL17AQ8IVW1 177 aa4.76□□□□□ -1.65
VEGFA-214ENST00000493786 Q8N1X5 172 aa4.76□□□□□ -1.65
VEGFA-214ENST00000493786 HIST1H4GQ99525 98 aa4.76□□□□□ -1.65
VEGFA-214ENST00000493786 SPANXB1Q9NS25 103 aaPredicted RBP4.76□□□□□ -1.65
VEGFA-214ENST00000493786 HERC2O95714 4834 aa4.75□□□□□ -1.65
VEGFA-214ENST00000493786 RPL37AP8A6NKH3 93 aa4.75□□□□□ -1.65
VEGFA-214ENST00000493786 S100A7L2Q5SY68 101 aa4.75□□□□□ -1.65
VEGFA-214ENST00000493786 KRTAP7-1Q8IUC3 87 aa4.75□□□□□ -1.65
VEGFA-214ENST00000493786 LINC00167Q96N53 147 aa4.75□□□□□ -1.65
VEGFA-214ENST00000493786 HSPG2P98160 4391 aa4.74□□□□□ -1.65
VEGFA-214ENST00000493786 IGKV2-28A0A075B6P5 120 aa4.74□□□□□ -1.65
VEGFA-214ENST00000493786 TRBV10-2A0A0K0K1G8 114 aa4.74□□□□□ -1.65
VEGFA-214ENST00000493786 IGKV2D-28P01615 120 aa4.74□□□□□ -1.65
VEGFA-214ENST00000493786 SMCPP49901 116 aaPredicted RBP4.74□□□□□ -1.65
VEGFA-214ENST00000493786 SOSTDC1Q6X4U4 206 aa4.74□□□□□ -1.65
VEGFA-214ENST00000493786 MUSTN1Q8IVN3 82 aa4.74□□□□□ -1.65
VEGFA-214ENST00000493786 PPDPFQ9H3Y8 114 aa4.74□□□□□ -1.65
VEGFA-214ENST00000493786 HIGD1BQ9P298 99 aa4.74□□□□□ -1.65
VEGFA-214ENST00000493786 UQCR10Q9UDW1 63 aa4.74□□□□□ -1.65
VEGFA-214ENST00000493786 CBY1Q9Y3M2 126 aa4.74□□□□□ -1.65
VEGFA-214ENST00000493786 A0A1B0GV90 55 aa4.73□□□□□ -1.65
VEGFA-214ENST00000493786 DDTP30046 118 aa4.73□□□□□ -1.65
VEGFA-214ENST00000493786 PRR3P79522 188 aaKnown RBP4.73□□□□□ -1.65
VEGFA-214ENST00000493786 C1orf137Q5JT78 98 aa4.73□□□□□ -1.65
VEGFA-214ENST00000493786 Q8NDZ9 215 aa4.73□□□□□ -1.65
VEGFA-214ENST00000493786 OR13C6PQ8NH95 151 aa4.73□□□□□ -1.65
VEGFA-214ENST00000493786 PSORS1C2Q9UIG4 136 aa4.73□□□□□ -1.65
VEGFA-214ENST00000493786 IGLV1-50A0A075B6I6 118 aa4.72□□□□□ -1.65
VEGFA-214ENST00000493786 A6NJY4 79 aa4.72□□□□□ -1.65
VEGFA-214ENST00000493786 EIF4EBP3O60516 100 aaPredicted RBP4.72□□□□□ -1.65
VEGFA-214ENST00000493786 TRAV13-2A0A0B4J235 113 aa4.71□□□□□ -1.66
VEGFA-214ENST00000493786 TRBV10-3A0A0K0K1G6 114 aa4.71□□□□□ -1.66
VEGFA-214ENST00000493786 TMEM238LA0A1B0GVL6 79 aa4.71□□□□□ -1.66
VEGFA-214ENST00000493786 TSTD3H0UI37 97 aa4.71□□□□□ -1.66
VEGFA-214ENST00000493786 PRYO14603 147 aa4.71□□□□□ -1.66
VEGFA-214ENST00000493786 UBE2AP49459 152 aa4.71□□□□□ -1.66
VEGFA-214ENST00000493786 HNRNPA3P51991 378 aaKnown RBP4.71□□□□□ -1.66
VEGFA-214ENST00000493786 TAL2Q16559 108 aa4.71□□□□□ -1.66
VEGFA-214ENST00000493786 REG3GQ6UW15 175 aa4.71□□□□□ -1.66
VEGFA-214ENST00000493786 C2orf91Q6ZV80 131 aa4.71□□□□□ -1.66
VEGFA-214ENST00000493786 TMEM126AQ9H061 195 aa4.71□□□□□ -1.66
VEGFA-214ENST00000493786 PRO1933Q9H354 126 aa4.71□□□□□ -1.66
VEGFA-214ENST00000493786 TRAV23DV6A0A075B6W5 121 aa4.7□□□□□ -1.66
VEGFA-214ENST00000493786 A6NDN8 102 aa4.7□□□□□ -1.66
VEGFA-214ENST00000493786 BCE1O60756 84 aa4.7□□□□□ -1.66
VEGFA-214ENST00000493786 HSD52Q0P140 79 aa4.7□□□□□ -1.66
VEGFA-214ENST00000493786 ETDCA0A1B0GVM5 59 aa4.69□□□□□ -1.66
VEGFA-214ENST00000493786 A4D1N5 150 aa4.69□□□□□ -1.66
VEGFA-214ENST00000493786 IGLV6-57P01721 117 aa4.69□□□□□ -1.66
VEGFA-214ENST00000493786 IGLV7-43P04211 117 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms