RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 LOC389332A0A1B0GUA5 103 aa2.32□□□□□ -2.04
CLIP4-212ENST00000493551 KANTRA0A1W2PQU2 76 aa2.32□□□□□ -2.04
CLIP4-212ENST00000493551 PDE6DO43924 150 aa2.32□□□□□ -2.04
CLIP4-212ENST00000493551 NPYP01303 97 aa2.32□□□□□ -2.04
CLIP4-212ENST00000493551 CKS2P33552 79 aa2.32□□□□□ -2.04
CLIP4-212ENST00000493551 PFN2P35080 140 aa2.32□□□□□ -2.04
CLIP4-212ENST00000493551 IFI27P40305 119 aaPredicted RBP2.32□□□□□ -2.04
CLIP4-212ENST00000493551 MOBPQ13875 183 aa2.32□□□□□ -2.04
CLIP4-212ENST00000493551 Q6Q795 121 aa2.32□□□□□ -2.04
CLIP4-212ENST00000493551 PLEKHB2Q96CS7 222 aa2.32□□□□□ -2.04
CLIP4-212ENST00000493551 SMIM12Q96EX1 92 aa2.32□□□□□ -2.04
CLIP4-212ENST00000493551 TIMM17AQ99595 171 aa2.32□□□□□ -2.04
CLIP4-212ENST00000493551 SMIM2Q9BVW6 85 aa2.32□□□□□ -2.04
CLIP4-212ENST00000493551 TMEM126AQ9H061 195 aa2.32□□□□□ -2.04
CLIP4-212ENST00000493551 TP73-AS1Q9UF72 201 aa2.32□□□□□ -2.04
CLIP4-212ENST00000493551 A0A1B0GVG6 124 aa2.31□□□□□ -2.04
CLIP4-212ENST00000493551 D6R8Y8 96 aa2.31□□□□□ -2.04
CLIP4-212ENST00000493551 F8VRH5 84 aa2.31□□□□□ -2.04
CLIP4-212ENST00000493551 M0R378 163 aa2.31□□□□□ -2.04
CLIP4-212ENST00000493551 RAB14P61106 215 aa2.31□□□□□ -2.04
CLIP4-212ENST00000493551 MRPS36P82909 103 aaKnown RBP2.31□□□□□ -2.04
CLIP4-212ENST00000493551 SPAG11AQ6PDA7 123 aa2.31□□□□□ -2.04
CLIP4-212ENST00000493551 Q6ZN92 141 aa2.31□□□□□ -2.04
CLIP4-212ENST00000493551 TEX43Q6ZNM6 134 aa2.31□□□□□ -2.04
CLIP4-212ENST00000493551 TMEM141Q96I45 108 aa2.31□□□□□ -2.04
CLIP4-212ENST00000493551 FAM210AQ96ND0 272 aa2.31□□□□□ -2.04
CLIP4-212ENST00000493551 SPRR4Q96PI1 79 aa2.31□□□□□ -2.04
CLIP4-212ENST00000493551 C2orf88Q9BSF0 95 aa2.31□□□□□ -2.04
CLIP4-212ENST00000493551 CDKN2A-AS1Q9UH64 79 aa2.31□□□□□ -2.04
CLIP4-212ENST00000493551 NDUFA12Q9UI09 145 aa2.31□□□□□ -2.04
CLIP4-212ENST00000493551 TEX46H3BTG2 121 aa2.3□□□□□ -2.04
CLIP4-212ENST00000493551 PPP1R2P9O14990 202 aa2.3□□□□□ -2.04
CLIP4-212ENST00000493551 SPINK8P0C7L1 97 aa2.3□□□□□ -2.04
CLIP4-212ENST00000493551 RAB5AP20339 215 aa2.3□□□□□ -2.04
CLIP4-212ENST00000493551 FAM104BQ5XKR9 115 aa2.3□□□□□ -2.04
CLIP4-212ENST00000493551 GAGE2AQ6NT46 116 aa2.3□□□□□ -2.04
CLIP4-212ENST00000493551 MRPL54Q6P161 138 aaKnown RBP2.3□□□□□ -2.04
CLIP4-212ENST00000493551 HRCT1Q6UXD1 115 aa2.3□□□□□ -2.04
CLIP4-212ENST00000493551 Q8IZM0 81 aa2.3□□□□□ -2.04
CLIP4-212ENST00000493551 Q8NDZ9 215 aa2.3□□□□□ -2.04
CLIP4-212ENST00000493551 EIF5A2Q9GZV4 153 aaKnown RBP2.3□□□□□ -2.04
CLIP4-212ENST00000493551 GEMIN7Q9H840 131 aaKnown RBP2.3□□□□□ -2.04
CLIP4-212ENST00000493551 PPP1R17O96001 155 aa2.29□□□□□ -2.04
CLIP4-212ENST00000493551 AKAP14Q86UN6 197 aa2.29□□□□□ -2.04
CLIP4-212ENST00000493551 COX7B2Q8TF08 81 aa2.29□□□□□ -2.04
CLIP4-212ENST00000493551 ZNF625Q96I27 306 aaPredicted RBP2.29□□□□□ -2.04
CLIP4-212ENST00000493551 VCX2Q9H322 139 aa2.29□□□□□ -2.04
CLIP4-212ENST00000493551 NDUFA13Q9P0J0 144 aa2.29□□□□□ -2.04
CLIP4-212ENST00000493551 A0A0U1RRA0 63 aa2.28□□□□□ -2.04
CLIP4-212ENST00000493551 SPINK1P00995 79 aa2.28□□□□□ -2.04
CLIP4-212ENST00000493551 VPREB1P12018 145 aa2.28□□□□□ -2.04
CLIP4-212ENST00000493551 C9orf153Q5TBE3 101 aa2.28□□□□□ -2.04
CLIP4-212ENST00000493551 LINC01551Q86U37 167 aa2.28□□□□□ -2.04
CLIP4-212ENST00000493551 SMCR5Q8TEV8 140 aa2.28□□□□□ -2.04
CLIP4-212ENST00000493551 SMIM7Q9BQ49 75 aa2.28□□□□□ -2.04
CLIP4-212ENST00000493551 C20orf78Q9BR46 151 aa2.28□□□□□ -2.04
CLIP4-212ENST00000493551 V9GYV3 84 aa2.28□□□□□ -2.04
CLIP4-212ENST00000493551 USH2AO75445 5202 aa2.28□□□□□ -2.04
CLIP4-212ENST00000493551 NCR3O14931 201 aa2.27□□□□□ -2.05
CLIP4-212ENST00000493551 SLC25A20O43772 301 aa2.27□□□□□ -2.05
CLIP4-212ENST00000493551 ZNF345Q14585 488 aa2.27□□□□□ -2.05
CLIP4-212ENST00000493551 ADIRFQ15847 76 aa2.27□□□□□ -2.05
CLIP4-212ENST00000493551 C2orf66Q6UXQ4 117 aa2.27□□□□□ -2.05
CLIP4-212ENST00000493551 PRELID3AQ96N28 172 aa2.27□□□□□ -2.05
CLIP4-212ENST00000493551 SND1-IT1Q9HBX3 110 aa2.27□□□□□ -2.05
CLIP4-212ENST00000493551 CYSLTR1Q9Y271 337 aa2.27□□□□□ -2.05
CLIP4-212ENST00000493551 SYNE2Q8WXH0 6885 aaKnown RBP2.27□□□□□ -2.05
CLIP4-212ENST00000493551 FCGBPQ9Y6R7 5405 aaPredicted RBP2.27□□□□□ -2.05
CLIP4-212ENST00000493551 SSPOA2VEC9 5147 aa2.26□□□□□ -2.05
CLIP4-212ENST00000493551 TRBV24-1A0A075B6N3 115 aa2.26□□□□□ -2.05
CLIP4-212ENST00000493551 ATP5LO75964 103 aa2.26□□□□□ -2.05
CLIP4-212ENST00000493551 ERC2-IT1O76042 136 aa2.26□□□□□ -2.05
CLIP4-212ENST00000493551 HERVK_113P63121 156 aa2.26□□□□□ -2.05
CLIP4-212ENST00000493551 TMEM136Q6ZRR5 245 aa2.26□□□□□ -2.05
CLIP4-212ENST00000493551 LINC00299Q6ZSB3 139 aa2.26□□□□□ -2.05
CLIP4-212ENST00000493551 FAM19A3Q7Z5A8 133 aa2.26□□□□□ -2.05
CLIP4-212ENST00000493551 LINC01561Q8N1V8 128 aa2.26□□□□□ -2.05
CLIP4-212ENST00000493551 FAM19A2Q8N3H0 131 aa2.26□□□□□ -2.05
CLIP4-212ENST00000493551 AMELXQ99217 191 aa2.26□□□□□ -2.05
CLIP4-212ENST00000493551 GNB1LQ9BYB4 327 aa2.26□□□□□ -2.05
CLIP4-212ENST00000493551 OSTCQ9NRP0 149 aa2.26□□□□□ -2.05
CLIP4-212ENST00000493551 NAT8BQ9UHF3 227 aa2.26□□□□□ -2.05
CLIP4-212ENST00000493551 ZNF706Q9Y5V0 76 aaPredicted RBP2.26□□□□□ -2.05
CLIP4-212ENST00000493551 MACF1Q9UPN3 7388 aaKnown RBP2.25□□□□□ -2.05
CLIP4-212ENST00000493551 ETDCA0A1B0GVM5 59 aa2.25□□□□□ -2.05
CLIP4-212ENST00000493551 LINC00862A6NCI5 91 aa2.25□□□□□ -2.05
CLIP4-212ENST00000493551 H7C2G1 150 aa2.25□□□□□ -2.05
CLIP4-212ENST00000493551 IGLV6-57P01721 117 aa2.25□□□□□ -2.05
CLIP4-212ENST00000493551 ADCYAP1P18509 176 aa2.25□□□□□ -2.05
CLIP4-212ENST00000493551 CXCL5P42830 114 aa2.25□□□□□ -2.05
CLIP4-212ENST00000493551 FAM74A3Q4VXF1 159 aa2.25□□□□□ -2.05
CLIP4-212ENST00000493551 ALKAL2Q6UX46 152 aa2.25□□□□□ -2.05
CLIP4-212ENST00000493551 ORMDL3Q8N138 153 aa2.25□□□□□ -2.05
CLIP4-212ENST00000493551 MAP1LC3AQ9H492 121 aa2.25□□□□□ -2.05
CLIP4-212ENST00000493551 IGIPA6NJ69 53 aa2.24□□□□□ -2.05
CLIP4-212ENST00000493551 HMSDA8MTL9 139 aa2.24□□□□□ -2.05
CLIP4-212ENST00000493551 F8W036 122 aa2.24□□□□□ -2.05
CLIP4-212ENST00000493551 TMEM250H0YL14 139 aa2.24□□□□□ -2.05
CLIP4-212ENST00000493551 RPL23P62829 140 aaKnown RBP2.24□□□□□ -2.05
CLIP4-212ENST00000493551 CTAG1AP78358 180 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms