RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 ITPR1Q14643 2758 aa-0.92□□□□□ -2.56
SYCP1-208ENST00000493377 MGAM2Q2M2H8 2515 aa-0.92□□□□□ -2.56
SYCP1-208ENST00000493377 SLIT1O75093 1534 aa-0.92□□□□□ -2.56
SYCP1-208ENST00000493377 A0A1B0GWA3 101 aa-0.92□□□□□ -2.56
SYCP1-208ENST00000493377 FAM223BA6NKX1 122 aa-0.92□□□□□ -2.56
SYCP1-208ENST00000493377 Q0VG73 95 aa-0.92□□□□□ -2.56
SYCP1-208ENST00000493377 CCDC58Q4VC31 144 aa-0.92□□□□□ -2.56
SYCP1-208ENST00000493377 C9orf153Q5TBE3 101 aa-0.92□□□□□ -2.56
SYCP1-208ENST00000493377 SCAPERQ9BY12 1400 aa-0.92□□□□□ -2.56
SYCP1-208ENST00000493377 CCDC168Q8NDH2 2452 aa-0.92□□□□□ -2.56
SYCP1-208ENST00000493377 COL6A5A8TX70 2615 aa-0.92□□□□□ -2.56
SYCP1-208ENST00000493377 CMYA5Q8N3K9 4069 aa-0.92□□□□□ -2.56
SYCP1-208ENST00000493377 LYSTQ99698 3801 aa-0.92□□□□□ -2.56
SYCP1-208ENST00000493377 MTORP42345 2549 aa-0.92□□□□□ -2.56
SYCP1-208ENST00000493377 TOP2BQ02880 1626 aa-0.93□□□□□ -2.56
SYCP1-208ENST00000493377 C9orf92A6NGG3 77 aa-0.93□□□□□ -2.56
SYCP1-208ENST00000493377 AKAIN1P0CW23 69 aa-0.93□□□□□ -2.56
SYCP1-208ENST00000493377 GNG11P61952 73 aa-0.93□□□□□ -2.56
SYCP1-208ENST00000493377 SEC11AP67812 179 aa-0.93□□□□□ -2.56
SYCP1-208ENST00000493377 CRIPTQ9P021 101 aa-0.93□□□□□ -2.56
SYCP1-208ENST00000493377 PRO1854Q9UHT4 67 aa-0.93□□□□□ -2.56
SYCP1-208ENST00000493377 NLRP1Q9C000 1473 aa-0.93□□□□□ -2.56
SYCP1-208ENST00000493377 EYSQ5T1H1 3165 aa-0.94□□□□□ -2.56
SYCP1-208ENST00000493377 SHPRHQ149N8 1683 aa-0.94□□□□□ -2.56
SYCP1-208ENST00000493377 CHD1O14646 1710 aa-0.94□□□□□ -2.56
SYCP1-208ENST00000493377 DEFB110Q30KQ9 67 aa-0.94□□□□□ -2.56
SYCP1-208ENST00000493377 MANBALQ9NQG1 85 aa-0.94□□□□□ -2.56
SYCP1-208ENST00000493377 IER3IP1Q9Y5U9 82 aa-0.94□□□□□ -2.56
SYCP1-208ENST00000493377 DNAH9Q9NYC9 4486 aa-0.94□□□□□ -2.56
SYCP1-208ENST00000493377 A0A0C4DFX4 3053 aa-0.94□□□□□ -2.56
SYCP1-208ENST00000493377 TARBP1Q13395 1621 aaKnown RBP-0.94□□□□□ -2.56
SYCP1-208ENST00000493377 MYOM2P54296 1465 aa-0.94□□□□□ -2.56
SYCP1-208ENST00000493377 MAPKBP1O60336 1514 aa-0.94□□□□□ -2.56
SYCP1-208ENST00000493377 PKD1L2Q7Z442 2459 aa-0.95□□□□□ -2.56
SYCP1-208ENST00000493377 COL14A1Q05707 1796 aaKnown RBP-0.95□□□□□ -2.56
SYCP1-208ENST00000493377 NCOA3Q9Y6Q9 1424 aa-0.95□□□□□ -2.56
SYCP1-208ENST00000493377 A0A1B0GU69 56 aa-0.95□□□□□ -2.56
SYCP1-208ENST00000493377 FAM24AA6NFZ4 105 aa-0.95□□□□□ -2.56
SYCP1-208ENST00000493377 I3L3M4 83 aa-0.95□□□□□ -2.56
SYCP1-208ENST00000493377 TRAPPC2P0DI81 140 aa-0.95□□□□□ -2.56
SYCP1-208ENST00000493377 TRAPPC2BP0DI82 140 aa-0.95□□□□□ -2.56
SYCP1-208ENST00000493377 S100A12P80511 92 aa-0.95□□□□□ -2.56
SYCP1-208ENST00000493377 TRIOO75962 3097 aa-0.95□□□□□ -2.56
SYCP1-208ENST00000493377 DNAH7Q8WXX0 4024 aa-0.96□□□□□ -2.56
SYCP1-208ENST00000493377 NAP1L6A6NFF2 107 aa-0.96□□□□□ -2.56
SYCP1-208ENST00000493377 H3BQ15 152 aa-0.96□□□□□ -2.56
SYCP1-208ENST00000493377 C12orf57Q99622 126 aa-0.96□□□□□ -2.56
SYCP1-208ENST00000493377 SPHKAPQ2M3C7 1700 aa-0.96□□□□□ -2.56
SYCP1-208ENST00000493377 DNAH1Q9P2D7 4330 aa-0.96□□□□□ -2.56
SYCP1-208ENST00000493377 DYNC1H1Q14204 4646 aaKnown RBP-0.97□□□□□ -2.56
SYCP1-208ENST00000493377 DMXL1Q9Y485 3027 aa-0.97□□□□□ -2.56
SYCP1-208ENST00000493377 RGPD2P0DJD1 1756 aa-0.97□□□□□ -2.56
SYCP1-208ENST00000493377 ARHGAP5Q13017 1502 aa-0.97□□□□□ -2.56
SYCP1-208ENST00000493377 MT1BP07438 61 aa-0.97□□□□□ -2.56
SYCP1-208ENST00000493377 MT1GP13640 62 aa-0.97□□□□□ -2.56
SYCP1-208ENST00000493377 C6orf201Q7Z4U5 140 aa-0.97□□□□□ -2.56
SYCP1-208ENST00000493377 TSC22D3Q99576 134 aa-0.97□□□□□ -2.56
SYCP1-208ENST00000493377 MRPL34Q9BQ48 92 aaKnown RBP-0.97□□□□□ -2.56
SYCP1-208ENST00000493377 PDE4DIPQ5VU43 2346 aa-0.97□□□□□ -2.56
SYCP1-208ENST00000493377 NRKQ7Z2Y5 1582 aa-0.97□□□□□ -2.56
SYCP1-208ENST00000493377 RELNP78509 3460 aa-0.97□□□□□ -2.57
SYCP1-208ENST00000493377 TOPAZ1Q8N9V7 1692 aa-0.97□□□□□ -2.57
SYCP1-208ENST00000493377 NBEAQ8NFP9 2946 aa-0.98□□□□□ -2.57
SYCP1-208ENST00000493377 GCN1Q92616 2671 aaKnown RBP-0.98□□□□□ -2.57
SYCP1-208ENST00000493377 CCL22O00626 93 aa-0.98□□□□□ -2.57
SYCP1-208ENST00000493377 SFTA2Q6UW10 78 aa-0.98□□□□□ -2.57
SYCP1-208ENST00000493377 S4R3F8 94 aa-0.98□□□□□ -2.57
SYCP1-208ENST00000493377 KALRNO60229 2985 aa-0.98□□□□□ -2.57
SYCP1-208ENST00000493377 ROCK2O75116 1388 aaKnown RBP-0.98□□□□□ -2.57
SYCP1-208ENST00000493377 UTP20O75691 2785 aaKnown RBP-0.98□□□□□ -2.57
SYCP1-208ENST00000493377 BCORQ6W2J9 1755 aa-0.98□□□□□ -2.57
SYCP1-208ENST00000493377 ZZEF1O43149 2961 aa-0.99□□□□□ -2.57
SYCP1-208ENST00000493377 CHD7Q9P2D1 2997 aa-0.99□□□□□ -2.57
SYCP1-208ENST00000493377 CICQ96RK0 1608 aaPredicted RBP-0.99□□□□□ -2.57
SYCP1-208ENST00000493377 A0A087WVE0 104 aa-0.99□□□□□ -2.57
SYCP1-208ENST00000493377 HMGN1P05114 100 aa-0.99□□□□□ -2.57
SYCP1-208ENST00000493377 KRTAP19-6Q3LI70 58 aa-0.99□□□□□ -2.57
SYCP1-208ENST00000493377 CGREF1Q99674 301 aa-0.99□□□□□ -2.57
SYCP1-208ENST00000493377 ABCA3Q99758 1704 aa-0.99□□□□□ -2.57
SYCP1-208ENST00000493377 KIF20BQ96Q89 1820 aa-0.99□□□□□ -2.57
SYCP1-208ENST00000493377 DNAH11Q96DT5 4516 aa-0.99□□□□□ -2.57
SYCP1-208ENST00000493377 MON2Q7Z3U7 1717 aa-1□□□□□ -2.57
SYCP1-208ENST00000493377 A0A0G2JND7 137 aa-1□□□□□ -2.57
SYCP1-208ENST00000493377 H3BQF6 201 aa-1□□□□□ -2.57
SYCP1-208ENST00000493377 MT2AP02795 61 aa-1□□□□□ -2.57
SYCP1-208ENST00000493377 MT1MQ8N339 61 aa-1□□□□□ -2.57
SYCP1-208ENST00000493377 CEP295Q9C0D2 2601 aa-1□□□□□ -2.57
SYCP1-208ENST00000493377 SACSQ9NZJ4 4579 aa-1□□□□□ -2.57
SYCP1-208ENST00000493377 APOBP04114 4563 aaKnown RBP-1.01□□□□□ -2.57
SYCP1-208ENST00000493377 TRANK1O15050 2925 aa-1.01□□□□□ -2.57
SYCP1-208ENST00000493377 SRCAPQ6ZRS2 3230 aa-1.01□□□□□ -2.57
SYCP1-208ENST00000493377 C7orf77A4D0Y5 90 aa-1.01□□□□□ -2.57
SYCP1-208ENST00000493377 H0Y9P7 68 aa-1.01□□□□□ -2.57
SYCP1-208ENST00000493377 GNG4P50150 75 aa-1.01□□□□□ -2.57
SYCP1-208ENST00000493377 KRTDAPP60985 99 aa-1.01□□□□□ -2.57
SYCP1-208ENST00000493377 LELP1Q5T871 98 aa-1.01□□□□□ -2.57
SYCP1-208ENST00000493377 CDKN2A-AS1Q9UH64 79 aa-1.01□□□□□ -2.57
SYCP1-208ENST00000493377 CLIP1P30622 1438 aa-1.01□□□□□ -2.57
SYCP1-208ENST00000493377 CC2D2AQ9P2K1 1620 aa-1.01□□□□□ -2.57
SYCP1-208ENST00000493377 SMG1Q96Q15 3661 aaKnown RBP-1.01□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms