RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, human

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NF1-215	ENST00000493220	C8orf87	E5RJ46	101 aa		4.31	□□□□□ -1.72
NF1-215	ENST00000493220	WFDC13	Q8IUB5	93 aa		4.31	□□□□□ -1.72
NF1-215	ENST00000493220	IGKV2-28	A0A075B6P5	120 aa		4.31	□□□□□ -1.72
NF1-215	ENST00000493220	IGKV2D-28	P01615	120 aa		4.31	□□□□□ -1.72
NF1-215	ENST00000493220		Q8N9L7	120 aa		4.31	□□□□□ -1.72
NF1-215	ENST00000493220	NDUFC1	O43677	76 aa		4.3	□□□□□ -1.72
NF1-215	ENST00000493220	PRR15	Q8IV56	129 aa		4.3	□□□□□ -1.72
NF1-215	ENST00000493220	UNQ6190/PRO20217	Q6UXQ8	127 aa		4.3	□□□□□ -1.72
NF1-215	ENST00000493220	RTL8C	O15255	209 aa		4.3	□□□□□ -1.72
NF1-215	ENST00000493220	PRR4	Q16378	134 aa		4.3	□□□□□ -1.72
NF1-215	ENST00000493220	URB1-AS1	Q96HZ7	61 aa		4.3	□□□□□ -1.72
NF1-215	ENST00000493220	CRYGA	P11844	174 aa		4.29	□□□□□ -1.72
NF1-215	ENST00000493220	REG3G	Q6UW15	175 aa		4.29	□□□□□ -1.72
NF1-215	ENST00000493220	FASN	P49327	2511 aa	Known RBP	4.29	□□□□□ -1.72
NF1-215	ENST00000493220	TP73-AS1	Q9UF72	201 aa		4.29	□□□□□ -1.72
NF1-215	ENST00000493220	SNURF	Q9Y675	71 aa		4.29	□□□□□ -1.72
NF1-215	ENST00000493220	LRRK2	Q5S007	2527 aa		4.29	□□□□□ -1.72
NF1-215	ENST00000493220	ZFYVE26	Q68DK2	2539 aa		4.28	□□□□□ -1.72
NF1-215	ENST00000493220	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.28	□□□□□ -1.72
NF1-215	ENST00000493220		Q6ZQY7	126 aa		4.28	□□□□□ -1.72
NF1-215	ENST00000493220	IGLV9-49	A0A0B4J1Y8	123 aa		4.28	□□□□□ -1.72
NF1-215	ENST00000493220	LST1	O00453	97 aa		4.28	□□□□□ -1.72
NF1-215	ENST00000493220	C16orf90	A8MZG2	172 aa		4.28	□□□□□ -1.73
NF1-215	ENST00000493220		Q6ZRU5	148 aa		4.28	□□□□□ -1.73
NF1-215	ENST00000493220	CASC10	Q5T4H9	136 aa		4.27	□□□□□ -1.73
NF1-215	ENST00000493220	TRBV7-6	A0A0J9YX20	115 aa		4.27	□□□□□ -1.73
NF1-215	ENST00000493220	IGLV5-45	A0A087WSX0	123 aa		4.27	□□□□□ -1.73
NF1-215	ENST00000493220	RPL37AP8	A6NKH3	93 aa		4.27	□□□□□ -1.73
NF1-215	ENST00000493220	C7orf65	Q6ZTY9	151 aa		4.27	□□□□□ -1.73
NF1-215	ENST00000493220	MAPKAPK5-AS1	Q8N8E1	139 aa		4.27	□□□□□ -1.73
NF1-215	ENST00000493220	PRUNE2	Q8WUY3	3088 aa		4.27	□□□□□ -1.73
NF1-215	ENST00000493220		A8MUN3	132 aa		4.27	□□□□□ -1.73
NF1-215	ENST00000493220	RETNLB	Q9BQ08	111 aa		4.27	□□□□□ -1.73
NF1-215	ENST00000493220	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.26	□□□□□ -1.73
NF1-215	ENST00000493220	IGLV5-39	A0A0G2JS06	123 aa		4.26	□□□□□ -1.73
NF1-215	ENST00000493220		A0A096LNJ9	63 aa		4.26	□□□□□ -1.73
NF1-215	ENST00000493220	LINC00476	Q8WZB0	136 aa		4.25	□□□□□ -1.73
NF1-215	ENST00000493220	C1orf137	Q5JT78	98 aa		4.25	□□□□□ -1.73
NF1-215	ENST00000493220	USP9Y	O00507	2555 aa	Predicted RBP	4.25	□□□□□ -1.73
NF1-215	ENST00000493220	PLA2G1B	P04054	148 aa	Known RBP	4.25	□□□□□ -1.73
NF1-215	ENST00000493220	LINC00310	P59036	64 aa		4.24	□□□□□ -1.73
NF1-215	ENST00000493220	F8	P00451	2351 aa		4.24	□□□□□ -1.73
NF1-215	ENST00000493220	KIAA0087	Q14695	138 aa		4.24	□□□□□ -1.73
NF1-215	ENST00000493220	C9orf116	Q5BN46	136 aa	Predicted RBP	4.24	□□□□□ -1.73
NF1-215	ENST00000493220	PRR34	Q9NV39	138 aa		4.24	□□□□□ -1.73
NF1-215	ENST00000493220	PSPHP1	O15172	72 aa		4.24	□□□□□ -1.73
NF1-215	ENST00000493220	SMIM11B	Q8TCY0	68 aa		4.24	□□□□□ -1.73
NF1-215	ENST00000493220		Q8N814	137 aa		4.23	□□□□□ -1.73
NF1-215	ENST00000493220	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	4.23	□□□□□ -1.73
NF1-215	ENST00000493220	IGSF10	Q6WRI0	2623 aa		4.23	□□□□□ -1.73
NF1-215	ENST00000493220	C10orf25	Q5T742	122 aa		4.23	□□□□□ -1.73
NF1-215	ENST00000493220	REV3L	O60673	3130 aa		4.23	□□□□□ -1.73
NF1-215	ENST00000493220	C6orf48	Q9UBA6	75 aa		4.22	□□□□□ -1.73
NF1-215	ENST00000493220	COL6A3	P12111	3177 aa		4.22	□□□□□ -1.73
NF1-215	ENST00000493220	C22orf24	Q9Y442	160 aa		4.22	□□□□□ -1.73
NF1-215	ENST00000493220	UNC80	Q8N2C7	3258 aa		4.22	□□□□□ -1.73
NF1-215	ENST00000493220		A0A087WTM6	91 aa		4.22	□□□□□ -1.73
NF1-215	ENST00000493220		Q8N3U1	123 aa		4.22	□□□□□ -1.73
NF1-215	ENST00000493220	PLA2G2D	Q9UNK4	145 aa		4.22	□□□□□ -1.73
NF1-215	ENST00000493220	TRBV10-3	A0A0K0K1G6	114 aa		4.21	□□□□□ -1.73
NF1-215	ENST00000493220	TSPEAR-AS2	P59090	65 aa		4.21	□□□□□ -1.73
NF1-215	ENST00000493220	HELZ2	Q9BYK8	2649 aa	Known RBP	4.21	□□□□□ -1.73
NF1-215	ENST00000493220	CIRBP-AS1	Q8TBR5	109 aa		4.21	□□□□□ -1.74
NF1-215	ENST00000493220		Q5XG85	94 aa		4.21	□□□□□ -1.74
NF1-215	ENST00000493220		Q6ZRP5	223 aa		4.21	□□□□□ -1.74
NF1-215	ENST00000493220	HECTD1	Q9ULT8	2610 aa		4.21	□□□□□ -1.74
NF1-215	ENST00000493220	ABCA2	Q9BZC7	2435 aa		4.21	□□□□□ -1.74
NF1-215	ENST00000493220	ZNF575	Q86XF7	245 aa		4.21	□□□□□ -1.74
NF1-215	ENST00000493220	LINC00208	Q96KT6	92 aa		4.21	□□□□□ -1.74
NF1-215	ENST00000493220	POLQ	O75417	2590 aa		4.21	□□□□□ -1.74
NF1-215	ENST00000493220	ABCA12	Q86UK0	2595 aa		4.21	□□□□□ -1.74
NF1-215	ENST00000493220	AGRN	O00468	2067 aa		4.21	□□□□□ -1.74
NF1-215	ENST00000493220	MYO9A	B2RTY4	2548 aa		4.2	□□□□□ -1.74
NF1-215	ENST00000493220	LINC01554	Q52M75	96 aa		4.19	□□□□□ -1.74
NF1-215	ENST00000493220	IGHV6-1	A0A0B4J1U7	121 aa		4.19	□□□□□ -1.74
NF1-215	ENST00000493220		Q6JHZ5	121 aa		4.19	□□□□□ -1.74
NF1-215	ENST00000493220	TMEM254	Q8TBM7	123 aa		4.19	□□□□□ -1.74
NF1-215	ENST00000493220	USP9X	Q93008	2570 aa	Predicted RBP	4.19	□□□□□ -1.74
NF1-215	ENST00000493220	C2CD3	Q4AC94	2353 aa		4.19	□□□□□ -1.74
NF1-215	ENST00000493220	SPINK1	P00995	79 aa		4.19	□□□□□ -1.74
NF1-215	ENST00000493220	OXT	P01178	125 aa		4.19	□□□□□ -1.74
NF1-215	ENST00000493220	RPL37A	P61513	92 aa	Known RBP	4.19	□□□□□ -1.74
NF1-215	ENST00000493220	C2orf91	Q6ZV80	131 aa		4.19	□□□□□ -1.74
NF1-215	ENST00000493220	TRBV7-7	A0A0K0K1E9	115 aa		4.18	□□□□□ -1.74
NF1-215	ENST00000493220	CNBP	P62633	177 aa	Known RBP	4.18	□□□□□ -1.74
NF1-215	ENST00000493220	TLX1NB	P0CAT3	122 aa		4.18	□□□□□ -1.74
NF1-215	ENST00000493220	LAMA2	P24043	3122 aa	Known RBP	4.18	□□□□□ -1.74
NF1-215	ENST00000493220	TRAV7	A0A075B6U4	112 aa		4.17	□□□□□ -1.74
NF1-215	ENST00000493220	hDV103S1	A0JD37	113 aa		4.17	□□□□□ -1.74
NF1-215	ENST00000493220	ADAMTSL4-AS1	Q5T5F5	129 aa		4.17	□□□□□ -1.74
NF1-215	ENST00000493220	LINC01547	P58512	204 aa	Predicted RBP	4.17	□□□□□ -1.74
NF1-215	ENST00000493220	PCOTH	Q58A44	107 aa		4.17	□□□□□ -1.74
NF1-215	ENST00000493220	C15orf56	Q8N910	161 aa		4.17	□□□□□ -1.74
NF1-215	ENST00000493220	LCE6A	A0A183	80 aa		4.17	□□□□□ -1.74
NF1-215	ENST00000493220	LIMD2	Q9BT23	127 aa		4.17	□□□□□ -1.74
NF1-215	ENST00000493220	LINC00167	Q96N53	147 aa		4.17	□□□□□ -1.74
NF1-215	ENST00000493220	FN1	P02751	2386 aa	Known RBP	4.16	□□□□□ -1.74
NF1-215	ENST00000493220	KRTAP16-1	A8MUX0	517 aa		4.16	□□□□□ -1.74
NF1-215	ENST00000493220	ATP11AUN	Q6ZP68	121 aa		4.16	□□□□□ -1.74
NF1-215	ENST00000493220	HCG22	E2RYF7	251 aa		4.15	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 171.3 ms