RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-208ENST00000491541 TMEM256-PLSCR3K7ERE1 68 aa7.08□□□□□ -1.28
SREBF2-208ENST00000491541 IGLV6-57P01721 117 aa7.08□□□□□ -1.28
SREBF2-208ENST00000491541 DAD1P61803 113 aa7.08□□□□□ -1.28
SREBF2-208ENST00000491541 SMIM26A0A096LP01 95 aa7.07□□□□□ -1.28
SREBF2-208ENST00000491541 Q6YL49 198 aa7.07□□□□□ -1.28
SREBF2-208ENST00000491541 TEP1Q99973 2627 aaKnown RBP7.07□□□□□ -1.28
SREBF2-208ENST00000491541 LINC00474Q9P2X8 69 aa7.07□□□□□ -1.28
SREBF2-208ENST00000491541 ANK2Q01484 3957 aa7.07□□□□□ -1.28
SREBF2-208ENST00000491541 CMC4P56277 68 aaPredicted RBP7.07□□□□□ -1.28
SREBF2-208ENST00000491541 C19orf73Q9NVV2 129 aa7.07□□□□□ -1.28
SREBF2-208ENST00000491541 MAP6D1Q9H9H5 199 aa7.06□□□□□ -1.28
SREBF2-208ENST00000491541 V9GYY9 64 aa7.06□□□□□ -1.28
SREBF2-208ENST00000491541 C1orf195Q5TG92 126 aa7.06□□□□□ -1.28
SREBF2-208ENST00000491541 A0A0J9YWU9 116 aa7.06□□□□□ -1.28
SREBF2-208ENST00000491541 IGLV10-54A0A075B6I4 117 aa7.05□□□□□ -1.28
SREBF2-208ENST00000491541 AVPP01185 164 aa7.05□□□□□ -1.28
SREBF2-208ENST00000491541 C6orf99Q4VX62 202 aa7.05□□□□□ -1.28
SREBF2-208ENST00000491541 FP248Q71RG6 208 aaPredicted RBP7.05□□□□□ -1.28
SREBF2-208ENST00000491541 ANGP03950 147 aaKnown RBP7.05□□□□□ -1.28
SREBF2-208ENST00000491541 TRAV10A0A0B4J240 114 aa7.04□□□□□ -1.28
SREBF2-208ENST00000491541 ZCCHC13Q8WW36 166 aaKnown RBP7.04□□□□□ -1.28
SREBF2-208ENST00000491541 CHD6Q8TD26 2715 aa7.04□□□□□ -1.28
SREBF2-208ENST00000491541 PRB2P02812 416 aaPredicted RBP7.04□□□□□ -1.28
SREBF2-208ENST00000491541 LINC00575Q6W349 94 aa7.04□□□□□ -1.28
SREBF2-208ENST00000491541 FLNAP21333 2647 aaKnown RBP7.03□□□□□ -1.28
SREBF2-208ENST00000491541 IGLV4-60A0A075B6I1 120 aa7.03□□□□□ -1.28
SREBF2-208ENST00000491541 KRTAP10-9P60411 292 aa7.03□□□□□ -1.28
SREBF2-208ENST00000491541 ITPR3Q14573 2671 aa7.03□□□□□ -1.28
SREBF2-208ENST00000491541 ZNF561-AS1K7EIQ3 104 aa7.03□□□□□ -1.28
SREBF2-208ENST00000491541 C18orf65Q6ZTR6 163 aa7.03□□□□□ -1.28
SREBF2-208ENST00000491541 Q8N3U1 123 aa7.03□□□□□ -1.28
SREBF2-208ENST00000491541 HELZ2Q9BYK8 2649 aaKnown RBP7.02□□□□□ -1.29
SREBF2-208ENST00000491541 LRCOL1A6NCL2 159 aa7.02□□□□□ -1.29
SREBF2-208ENST00000491541 DYNC2H1Q8NCM8 4307 aaKnown RBP7.01□□□□□ -1.29
SREBF2-208ENST00000491541 LINC01547P58512 204 aaPredicted RBP7.01□□□□□ -1.29
SREBF2-208ENST00000491541 DEFB135Q30KP9 77 aa7.01□□□□□ -1.29
SREBF2-208ENST00000491541 SPATA3Q8NHX4 192 aa7.01□□□□□ -1.29
SREBF2-208ENST00000491541 DNAJC9-AS1A6NH13 148 aa7□□□□□ -1.29
SREBF2-208ENST00000491541 MIFP14174 115 aa7□□□□□ -1.29
SREBF2-208ENST00000491541 SEC61GP60059 68 aa7□□□□□ -1.29
SREBF2-208ENST00000491541 GYPEP15421 78 aa6.99□□□□□ -1.29
SREBF2-208ENST00000491541 C9orf116Q5BN46 136 aaPredicted RBP6.99□□□□□ -1.29
SREBF2-208ENST00000491541 Q6ZVQ6 151 aa6.99□□□□□ -1.29
SREBF2-208ENST00000491541 ZNF843Q8N446 348 aa6.99□□□□□ -1.29
SREBF2-208ENST00000491541 C16orf74Q96GX8 76 aa6.99□□□□□ -1.29
SREBF2-208ENST00000491541 TM2D3Q9BRN9 247 aa6.99□□□□□ -1.29
SREBF2-208ENST00000491541 Q6ZQY7 126 aa6.99□□□□□ -1.29
SREBF2-208ENST00000491541 OCR1Q9BZK8 76 aa6.99□□□□□ -1.29
SREBF2-208ENST00000491541 SETXQ7Z333 2677 aaKnown RBP6.99□□□□□ -1.29
SREBF2-208ENST00000491541 UBE2DNLQ8IWF7 75 aa6.98□□□□□ -1.29
SREBF2-208ENST00000491541 ODF3L2Q3SX64 289 aa6.98□□□□□ -1.29
SREBF2-208ENST00000491541 Q6ZTC4 211 aa6.98□□□□□ -1.29
SREBF2-208ENST00000491541 LINC00269Q8N2A0 174 aa6.98□□□□□ -1.29
SREBF2-208ENST00000491541 Q8N9L7 120 aa6.98□□□□□ -1.29
SREBF2-208ENST00000491541 WFDC10AQ9H1F0 79 aa6.98□□□□□ -1.29
SREBF2-208ENST00000491541 TRBV6-8A0A0A6YYG3 113 aa6.97□□□□□ -1.29
SREBF2-208ENST00000491541 M0R2N4 97 aa6.97□□□□□ -1.29
SREBF2-208ENST00000491541 NREPQ16612 68 aa6.97□□□□□ -1.29
SREBF2-208ENST00000491541 PSCAO43653 123 aa6.96□□□□□ -1.29
SREBF2-208ENST00000491541 Q1T7F1 81 aa6.96□□□□□ -1.29
SREBF2-208ENST00000491541 CYP4F30PQ9H0H9 118 aa6.96□□□□□ -1.29
SREBF2-208ENST00000491541 PRR34Q9NV39 138 aa6.96□□□□□ -1.29
SREBF2-208ENST00000491541 LINC00959A0A1B0GUT2 108 aa6.96□□□□□ -1.3
SREBF2-208ENST00000491541 SMR3AQ99954 134 aa6.96□□□□□ -1.3
SREBF2-208ENST00000491541 FUSP35637 526 aaKnown RBP eCLIP6.95□□□□□ -1.3
SREBF2-208ENST00000491541 APOC4P55056 127 aa6.95□□□□□ -1.3
SREBF2-208ENST00000491541 Q6ZRU5 148 aa6.95□□□□□ -1.3
SREBF2-208ENST00000491541 INAFM1C9JVW0 142 aa6.95□□□□□ -1.3
SREBF2-208ENST00000491541 TNP2Q05952 138 aa6.95□□□□□ -1.3
SREBF2-208ENST00000491541 Q8NDZ9 215 aa6.95□□□□□ -1.3
SREBF2-208ENST00000491541 TMEM254Q8TBM7 123 aa6.95□□□□□ -1.3
SREBF2-208ENST00000491541 PLA2G2DQ9UNK4 145 aa6.95□□□□□ -1.3
SREBF2-208ENST00000491541 BPY2O14599 106 aa6.94□□□□□ -1.3
SREBF2-208ENST00000491541 PRR15Q8IV56 129 aa6.94□□□□□ -1.3
SREBF2-208ENST00000491541 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.94□□□□□ -1.3
SREBF2-208ENST00000491541 IGLV5-48A0A075B6I7 105 aa6.93□□□□□ -1.3
SREBF2-208ENST00000491541 IGKV2D-24A0A075B6R9 120 aa6.93□□□□□ -1.3
SREBF2-208ENST00000491541 ELOF1P60002 83 aaKnown RBP6.92□□□□□ -1.3
SREBF2-208ENST00000491541 PRR4Q16378 134 aa6.92□□□□□ -1.3
SREBF2-208ENST00000491541 ITPR1Q14643 2758 aa6.92□□□□□ -1.3
SREBF2-208ENST00000491541 IGLV5-37A0A075B6J1 123 aa6.92□□□□□ -1.3
SREBF2-208ENST00000491541 TEX15Q9BXT5 2789 aa6.92□□□□□ -1.3
SREBF2-208ENST00000491541 KRTAP26-1Q6PEX3 210 aa6.92□□□□□ -1.3
SREBF2-208ENST00000491541 ALMS1Q8TCU4 4167 aa6.92□□□□□ -1.3
SREBF2-208ENST00000491541 BBC3Q96PG8 261 aaPredicted RBP6.91□□□□□ -1.3
SREBF2-208ENST00000491541 KLK12Q9UKR0 248 aa6.91□□□□□ -1.3
SREBF2-208ENST00000491541 XAGE1AQ9HD64 81 aa6.91□□□□□ -1.3
SREBF2-208ENST00000491541 C3orf84H3BNL1 204 aa6.91□□□□□ -1.3
SREBF2-208ENST00000491541 CRYBG3Q68DQ2 2970 aa6.9□□□□□ -1.3
SREBF2-208ENST00000491541 CMYA5Q8N3K9 4069 aa6.9□□□□□ -1.3
SREBF2-208ENST00000491541 DEFB105AQ8NG35 78 aa6.9□□□□□ -1.3
SREBF2-208ENST00000491541 CD164L2Q6UWJ8 174 aa6.9□□□□□ -1.31
SREBF2-208ENST00000491541 LINC01006Q8NI28 216 aa6.9□□□□□ -1.31
SREBF2-208ENST00000491541 SPART-AS1P0CW21 52 aa6.89□□□□□ -1.31
SREBF2-208ENST00000491541 NBEAL2Q6ZNJ1 2754 aa6.89□□□□□ -1.31
SREBF2-208ENST00000491541 PRYO14603 147 aa6.89□□□□□ -1.31
SREBF2-208ENST00000491541 PSPHP1O15172 72 aa6.89□□□□□ -1.31
SREBF2-208ENST00000491541 NBEAL1Q6ZS30 2694 aa6.89□□□□□ -1.31
SREBF2-208ENST00000491541 PRKDCP78527 4128 aaKnown RBP6.89□□□□□ -1.31
SREBF2-208ENST00000491541 IGKV4-1P06312 121 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms