RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 LINC00614P0C842 121 aa4.34□□□□□ -1.71
PRPF4B-208ENST00000490653 IGLC3P0DOY3 106 aa4.34□□□□□ -1.71
PRPF4B-208ENST00000490653 ZNF22P17026 224 aaPredicted RBP4.34□□□□□ -1.71
PRPF4B-208ENST00000490653 PFN2P35080 140 aa4.34□□□□□ -1.71
PRPF4B-208ENST00000490653 KRTAP10-7P60409 375 aaPredicted RBP4.34□□□□□ -1.71
PRPF4B-208ENST00000490653 RHEBQ15382 184 aa4.34□□□□□ -1.71
PRPF4B-208ENST00000490653 COX19Q49B96 90 aa4.34□□□□□ -1.71
PRPF4B-208ENST00000490653 MRPL55Q7Z7F7 128 aaKnown RBP4.34□□□□□ -1.71
PRPF4B-208ENST00000490653 Q8N9P0 234 aaPredicted RBP4.34□□□□□ -1.71
PRPF4B-208ENST00000490653 Q8NDZ9 215 aa4.34□□□□□ -1.71
PRPF4B-208ENST00000490653 ZNF625Q96I27 306 aaPredicted RBP4.34□□□□□ -1.71
PRPF4B-208ENST00000490653 C11orf86A6NJI1 115 aa4.33□□□□□ -1.72
PRPF4B-208ENST00000490653 B5MCH6 92 aa4.33□□□□□ -1.72
PRPF4B-208ENST00000490653 CXCL5P42830 114 aa4.33□□□□□ -1.72
PRPF4B-208ENST00000490653 LBHQ53QV2 105 aaPredicted RBP4.33□□□□□ -1.72
PRPF4B-208ENST00000490653 KRTAP5-11Q6L8G4 156 aa4.33□□□□□ -1.72
PRPF4B-208ENST00000490653 YPEL4Q96NS1 127 aa4.33□□□□□ -1.72
PRPF4B-208ENST00000490653 IGLV1-50A0A075B6I6 118 aa4.32□□□□□ -1.72
PRPF4B-208ENST00000490653 A0A087X002 238 aa4.32□□□□□ -1.72
PRPF4B-208ENST00000490653 IGLV5-39A0A0G2JS06 123 aa4.32□□□□□ -1.72
PRPF4B-208ENST00000490653 NUPR1O60356 82 aa4.32□□□□□ -1.72
PRPF4B-208ENST00000490653 BCE1O60756 84 aa4.32□□□□□ -1.72
PRPF4B-208ENST00000490653 BAGE3Q86Y29 109 aa4.32□□□□□ -1.72
PRPF4B-208ENST00000490653 TP73-AS1Q9UF72 201 aa4.32□□□□□ -1.72
PRPF4B-208ENST00000490653 IGLV5-37A0A075B6J1 123 aa4.31□□□□□ -1.72
PRPF4B-208ENST00000490653 TSPAN13O95857 204 aa4.31□□□□□ -1.72
PRPF4B-208ENST00000490653 HBDP02042 147 aa4.31□□□□□ -1.72
PRPF4B-208ENST00000490653 IGKV2-28A0A075B6P5 120 aa4.3□□□□□ -1.72
PRPF4B-208ENST00000490653 A0A0U1RRA0 63 aa4.3□□□□□ -1.72
PRPF4B-208ENST00000490653 LINC01549A6NIU2 74 aa4.3□□□□□ -1.72
PRPF4B-208ENST00000490653 TMEM238C9JI98 176 aa4.3□□□□□ -1.72
PRPF4B-208ENST00000490653 H3BRM9 83 aa4.3□□□□□ -1.72
PRPF4B-208ENST00000490653 ATP5LO75964 103 aa4.3□□□□□ -1.72
PRPF4B-208ENST00000490653 IGKV2D-28P01615 120 aa4.3□□□□□ -1.72
PRPF4B-208ENST00000490653 VPREB1P12018 145 aa4.3□□□□□ -1.72
PRPF4B-208ENST00000490653 KRTAP13-2Q52LG2 175 aa4.3□□□□□ -1.72
PRPF4B-208ENST00000490653 TMEM170BQ5T4T1 132 aa4.3□□□□□ -1.72
PRPF4B-208ENST00000490653 KRTAP13-1Q8IUC0 172 aa4.3□□□□□ -1.72
PRPF4B-208ENST00000490653 SND1-IT1Q9HBX3 110 aa4.3□□□□□ -1.72
PRPF4B-208ENST00000490653 SNAPINO95295 136 aa4.29□□□□□ -1.72
PRPF4B-208ENST00000490653 FAM19A2Q8N3H0 131 aa4.29□□□□□ -1.72
PRPF4B-208ENST00000490653 ERG28Q9UKR5 140 aa4.29□□□□□ -1.72
PRPF4B-208ENST00000490653 CHTOPQ9Y3Y2 248 aaKnown RBP4.29□□□□□ -1.72
PRPF4B-208ENST00000490653 TMEM223A0PJW6 202 aa4.28□□□□□ -1.72
PRPF4B-208ENST00000490653 RPL28P46779 137 aaKnown RBP4.28□□□□□ -1.72
PRPF4B-208ENST00000490653 PRLHP81277 87 aa4.28□□□□□ -1.72
PRPF4B-208ENST00000490653 PRR4Q16378 134 aa4.28□□□□□ -1.72
PRPF4B-208ENST00000490653 CBLN2Q8IUK8 224 aa4.28□□□□□ -1.72
PRPF4B-208ENST00000490653 SVBPQ8N300 66 aa4.28□□□□□ -1.72
PRPF4B-208ENST00000490653 NKAPP1Q8N9T2 125 aa4.28□□□□□ -1.72
PRPF4B-208ENST00000490653 M0R378 163 aa4.27□□□□□ -1.73
PRPF4B-208ENST00000490653 UBE2AP49459 152 aa4.27□□□□□ -1.73
PRPF4B-208ENST00000490653 LINC00158P58513 81 aa4.27□□□□□ -1.73
PRPF4B-208ENST00000490653 KRTAP10-6P60371 365 aaPredicted RBP4.27□□□□□ -1.73
PRPF4B-208ENST00000490653 SLC7A5P1Q8MH63 180 aa4.27□□□□□ -1.73
PRPF4B-208ENST00000490653 TYMSOSQ8TAI1 123 aa4.27□□□□□ -1.73
PRPF4B-208ENST00000490653 IFI27L1Q96BM0 104 aa4.27□□□□□ -1.73
PRPF4B-208ENST00000490653 MUC17Q685J3 4493 aa4.26□□□□□ -1.73
PRPF4B-208ENST00000490653 TRGC2P03986 189 aa4.26□□□□□ -1.73
PRPF4B-208ENST00000490653 SMIM13P0DJ93 91 aa4.26□□□□□ -1.73
PRPF4B-208ENST00000490653 CRYGAP11844 174 aa4.26□□□□□ -1.73
PRPF4B-208ENST00000490653 RPL13AP40429 203 aaKnown RBP4.26□□□□□ -1.73
PRPF4B-208ENST00000490653 FAM19A1Q7Z5A9 133 aa4.26□□□□□ -1.73
PRPF4B-208ENST00000490653 TMEM126AQ9H061 195 aa4.26□□□□□ -1.73
PRPF4B-208ENST00000490653 TRAV12-1A0A0B4J245 112 aa4.25□□□□□ -1.73
PRPF4B-208ENST00000490653 H0Y8G0 127 aa4.25□□□□□ -1.73
PRPF4B-208ENST00000490653 NDUFA5Q16718 116 aa4.25□□□□□ -1.73
PRPF4B-208ENST00000490653 C3orf22Q8N5N4 141 aa4.25□□□□□ -1.73
PRPF4B-208ENST00000490653 CHCHD1Q96BP2 118 aaKnown RBP4.25□□□□□ -1.73
PRPF4B-208ENST00000490653 PLEKHB2Q96CS7 222 aa4.25□□□□□ -1.73
PRPF4B-208ENST00000490653 RETNLBQ9BQ08 111 aa4.25□□□□□ -1.73
PRPF4B-208ENST00000490653 TSPEAR-AS2P59090 65 aa4.24□□□□□ -1.73
PRPF4B-208ENST00000490653 RPL24P83731 157 aaKnown RBP4.24□□□□□ -1.73
PRPF4B-208ENST00000490653 COX17Q14061 63 aa4.24□□□□□ -1.73
PRPF4B-208ENST00000490653 PMCHL2Q9BQD1 86 aa4.24□□□□□ -1.73
PRPF4B-208ENST00000490653 COLCA2A8K830 154 aa4.23□□□□□ -1.73
PRPF4B-208ENST00000490653 HSBP1O75506 76 aa4.23□□□□□ -1.73
PRPF4B-208ENST00000490653 SERF1AO75920 110 aa4.23□□□□□ -1.73
PRPF4B-208ENST00000490653 MIR7-3HGQ8N6C7 128 aa4.23□□□□□ -1.73
PRPF4B-208ENST00000490653 FSIP2Q5CZC0 6907 aa4.23□□□□□ -1.73
PRPF4B-208ENST00000490653 NCR3O14931 201 aa4.22□□□□□ -1.73
PRPF4B-208ENST00000490653 FABP4P15090 132 aa4.22□□□□□ -1.73
PRPF4B-208ENST00000490653 MEIG1Q5JSS6 88 aa4.22□□□□□ -1.73
PRPF4B-208ENST00000490653 BOD1L2Q8IYS8 172 aa4.22□□□□□ -1.73
PRPF4B-208ENST00000490653 DAND5Q8N907 189 aa4.22□□□□□ -1.73
PRPF4B-208ENST00000490653 HIGD2AQ9BW72 106 aa4.22□□□□□ -1.73
PRPF4B-208ENST00000490653 KRTAP2-2Q9BYT5 123 aa4.22□□□□□ -1.73
PRPF4B-208ENST00000490653 LEPROTL1O95214 131 aa4.21□□□□□ -1.74
PRPF4B-208ENST00000490653 FAM229BQ4G0N7 80 aa4.21□□□□□ -1.74
PRPF4B-208ENST00000490653 LINC00304Q8N9R0 145 aa4.21□□□□□ -1.74
PRPF4B-208ENST00000490653 SMCR5Q8TEV8 140 aa4.21□□□□□ -1.74
PRPF4B-208ENST00000490653 NDUFA12Q9UI09 145 aa4.21□□□□□ -1.74
PRPF4B-208ENST00000490653 IGKV2D-26A0A0A0MRZ7 120 aa4.2□□□□□ -1.74
PRPF4B-208ENST00000490653 TRBV10-3A0A0K0K1G6 114 aa4.2□□□□□ -1.74
PRPF4B-208ENST00000490653 KRTAP4-16G5E9R7 235 aaPredicted RBP4.2□□□□□ -1.74
PRPF4B-208ENST00000490653 LEPROTO15243 131 aa4.2□□□□□ -1.74
PRPF4B-208ENST00000490653 ERC2-IT1O76042 136 aa4.2□□□□□ -1.74
PRPF4B-208ENST00000490653 SPRR4Q96PI1 79 aa4.2□□□□□ -1.74
PRPF4B-208ENST00000490653 PPDPFQ9H3Y8 114 aa4.2□□□□□ -1.74
PRPF4B-208ENST00000490653 ATP6V1G1O75348 118 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms