RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 MIEN1Q9BRT3 115 aa7□□□□□ -1.29
SFXN3-207ENST00000489434 LINC01549A6NIU2 74 aa6.99□□□□□ -1.29
SFXN3-207ENST00000489434 FAM229BQ4G0N7 80 aa6.99□□□□□ -1.29
SFXN3-207ENST00000489434 ERASQ7Z444 233 aa6.99□□□□□ -1.29
SFXN3-207ENST00000489434 LINC00304Q8N9R0 145 aa6.99□□□□□ -1.29
SFXN3-207ENST00000489434 IGKV2D-26A0A0A0MRZ7 120 aa6.98□□□□□ -1.29
SFXN3-207ENST00000489434 TINCRA0A1B0GVN0 87 aa6.98□□□□□ -1.29
SFXN3-207ENST00000489434 SMIM1B2RUZ4 78 aa6.98□□□□□ -1.29
SFXN3-207ENST00000489434 DLEU1O43261 78 aa6.98□□□□□ -1.29
SFXN3-207ENST00000489434 KRTAP9-2Q9BYQ4 174 aa6.98□□□□□ -1.29
SFXN3-207ENST00000489434 CDIP1Q9H305 208 aa6.98□□□□□ -1.29
SFXN3-207ENST00000489434 PRO1933Q9H354 126 aa6.98□□□□□ -1.29
SFXN3-207ENST00000489434 IGLV5-37A0A075B6J1 123 aa6.97□□□□□ -1.29
SFXN3-207ENST00000489434 C20orf202A1L168 122 aa6.97□□□□□ -1.29
SFXN3-207ENST00000489434 SNHG12Q9BXW3 62 aa6.97□□□□□ -1.29
SFXN3-207ENST00000489434 ANAPC11Q9NYG5 84 aa6.97□□□□□ -1.29
SFXN3-207ENST00000489434 ATP5LO75964 103 aa6.96□□□□□ -1.3
SFXN3-207ENST00000489434 COL5A1-AS1Q5SY13 56 aa6.96□□□□□ -1.3
SFXN3-207ENST00000489434 RETNLBQ9BQ08 111 aa6.96□□□□□ -1.3
SFXN3-207ENST00000489434 MRPL18Q9H0U6 180 aaKnown RBP6.96□□□□□ -1.3
SFXN3-207ENST00000489434 TRAPPC1Q9Y5R8 145 aa6.96□□□□□ -1.3
SFXN3-207ENST00000489434 IGLV5-45A0A087WSX0 123 aa6.95□□□□□ -1.3
SFXN3-207ENST00000489434 H3BRM9 83 aa6.95□□□□□ -1.3
SFXN3-207ENST00000489434 KRTAP13-2Q52LG2 175 aa6.95□□□□□ -1.3
SFXN3-207ENST00000489434 KRTAP13-1Q8IUC0 172 aa6.95□□□□□ -1.3
SFXN3-207ENST00000489434 GNB1LQ9BYB4 327 aa6.95□□□□□ -1.3
SFXN3-207ENST00000489434 FAT4Q6V0I7 4981 aa6.95□□□□□ -1.3
SFXN3-207ENST00000489434 IGLV7-46A0A075B6I9 117 aa6.94□□□□□ -1.3
SFXN3-207ENST00000489434 IGKV2-28A0A075B6P5 120 aa6.94□□□□□ -1.3
SFXN3-207ENST00000489434 SCGB1D1O95968 90 aa6.94□□□□□ -1.3
SFXN3-207ENST00000489434 IGKV2D-28P01615 120 aa6.94□□□□□ -1.3
SFXN3-207ENST00000489434 SPINK8P0C7L1 97 aa6.94□□□□□ -1.3
SFXN3-207ENST00000489434 TPRXLQ17RH7 258 aa6.94□□□□□ -1.3
SFXN3-207ENST00000489434 CST9LQ9H4G1 147 aa6.94□□□□□ -1.3
SFXN3-207ENST00000489434 PMVKQ15126 192 aa6.93□□□□□ -1.3
SFXN3-207ENST00000489434 KIAA1644Q3SXP7 199 aa6.93□□□□□ -1.3
SFXN3-207ENST00000489434 PET117Q6UWS5 81 aa6.93□□□□□ -1.3
SFXN3-207ENST00000489434 PFN2P35080 140 aa6.92□□□□□ -1.3
SFXN3-207ENST00000489434 RPL24P83731 157 aaKnown RBP6.92□□□□□ -1.3
SFXN3-207ENST00000489434 PMCHL1Q16048 86 aa6.92□□□□□ -1.3
SFXN3-207ENST00000489434 ANKRD39Q53RE8 183 aa6.92□□□□□ -1.3
SFXN3-207ENST00000489434 LCE2AQ5TA79 106 aaPredicted RBP6.92□□□□□ -1.3
SFXN3-207ENST00000489434 FAM19A1Q7Z5A9 133 aa6.92□□□□□ -1.3
SFXN3-207ENST00000489434 PRLHP81277 87 aa6.91□□□□□ -1.3
SFXN3-207ENST00000489434 VAMP8Q9BV40 100 aa6.91□□□□□ -1.3
SFXN3-207ENST00000489434 FA2HQ7L5A8 372 aa6.9□□□□□ -1.3
SFXN3-207ENST00000489434 TMEM126AQ9H061 195 aa6.9□□□□□ -1.3
SFXN3-207ENST00000489434 UQCR10Q9UDW1 63 aa6.9□□□□□ -1.3
SFXN3-207ENST00000489434 LINC01546A6NGU7 62 aa6.89□□□□□ -1.31
SFXN3-207ENST00000489434 TMEM238C9JI98 176 aa6.89□□□□□ -1.31
SFXN3-207ENST00000489434 COX17Q14061 63 aa6.89□□□□□ -1.31
SFXN3-207ENST00000489434 SPAG11AQ6PDA7 123 aa6.89□□□□□ -1.31
SFXN3-207ENST00000489434 SND1-IT1Q9HBX3 110 aa6.89□□□□□ -1.31
SFXN3-207ENST00000489434 VPREB1P12018 145 aa6.88□□□□□ -1.31
SFXN3-207ENST00000489434 SFTA2Q6UW10 78 aa6.88□□□□□ -1.31
SFXN3-207ENST00000489434 PPDPFQ9H3Y8 114 aa6.88□□□□□ -1.31
SFXN3-207ENST00000489434 ERG28Q9UKR5 140 aa6.88□□□□□ -1.31
SFXN3-207ENST00000489434 IGLV5-39A0A0G2JS06 123 aa6.87□□□□□ -1.31
SFXN3-207ENST00000489434 C4orf48Q5BLP8 95 aa6.87□□□□□ -1.31
SFXN3-207ENST00000489434 PLEKHB2Q96CS7 222 aa6.87□□□□□ -1.31
SFXN3-207ENST00000489434 HIGD2AQ9BW72 106 aa6.87□□□□□ -1.31
SFXN3-207ENST00000489434 M0R378 163 aa6.86□□□□□ -1.31
SFXN3-207ENST00000489434 IGLC3P0DOY3 106 aa6.86□□□□□ -1.31
SFXN3-207ENST00000489434 BAGE3Q86Y29 109 aa6.86□□□□□ -1.31
SFXN3-207ENST00000489434 FP248Q71RG6 208 aaPredicted RBP6.85□□□□□ -1.31
SFXN3-207ENST00000489434 LINC00337Q8N6G1 96 aa6.85□□□□□ -1.31
SFXN3-207ENST00000489434 ZNF706Q9Y5V0 76 aaPredicted RBP6.85□□□□□ -1.31
SFXN3-207ENST00000489434 MUC17Q685J3 4493 aa6.84□□□□□ -1.31
SFXN3-207ENST00000489434 SERF1AO75920 110 aa6.84□□□□□ -1.31
SFXN3-207ENST00000489434 UBE2V1Q13404 147 aa6.84□□□□□ -1.31
SFXN3-207ENST00000489434 C3orf22Q8N5N4 141 aa6.84□□□□□ -1.31
SFXN3-207ENST00000489434 ZNF625Q96I27 306 aaPredicted RBP6.84□□□□□ -1.31
SFXN3-207ENST00000489434 KRTAP9-6A0A140TA67 174 aa6.83□□□□□ -1.32
SFXN3-207ENST00000489434 ZNF22P17026 224 aaPredicted RBP6.83□□□□□ -1.32
SFXN3-207ENST00000489434 LINC00310P59036 64 aa6.83□□□□□ -1.32
SFXN3-207ENST00000489434 PCP4P48539 62 aa6.82□□□□□ -1.32
SFXN3-207ENST00000489434 LINC00158P58513 81 aa6.82□□□□□ -1.32
SFXN3-207ENST00000489434 SPRR4Q96PI1 79 aa6.82□□□□□ -1.32
SFXN3-207ENST00000489434 SPATA45Q537H7 98 aa6.81□□□□□ -1.32
SFXN3-207ENST00000489434 TMEM170BQ5T4T1 132 aa6.81□□□□□ -1.32
SFXN3-207ENST00000489434 PMCHL2Q9BQD1 86 aa6.81□□□□□ -1.32
SFXN3-207ENST00000489434 HBDP02042 147 aa6.8□□□□□ -1.32
SFXN3-207ENST00000489434 CHCHD1Q96BP2 118 aaKnown RBP6.8□□□□□ -1.32
SFXN3-207ENST00000489434 PAM16Q9Y3D7 125 aa6.8□□□□□ -1.32
SFXN3-207ENST00000489434 Q8NBF4 154 aa6.79□□□□□ -1.32
SFXN3-207ENST00000489434 Q8NDZ9 215 aa6.79□□□□□ -1.32
SFXN3-207ENST00000489434 C11orf86A6NJI1 115 aa6.78□□□□□ -1.32
SFXN3-207ENST00000489434 SPINK1P00995 79 aa6.78□□□□□ -1.32
SFXN3-207ENST00000489434 C3orf79P0CE67 100 aa6.78□□□□□ -1.32
SFXN3-207ENST00000489434 LINC01547P58512 204 aaPredicted RBP6.78□□□□□ -1.32
SFXN3-207ENST00000489434 NDUFA12Q9UI09 145 aa6.78□□□□□ -1.32
SFXN3-207ENST00000489434 A0A096LNJ9 63 aa6.77□□□□□ -1.33
SFXN3-207ENST00000489434 PRYO14603 147 aa6.77□□□□□ -1.33
SFXN3-207ENST00000489434 KRTDAPP60985 99 aa6.77□□□□□ -1.33
SFXN3-207ENST00000489434 BOD1L2Q8IYS8 172 aa6.77□□□□□ -1.33
SFXN3-207ENST00000489434 A0A0U1RRA0 63 aa6.76□□□□□ -1.33
SFXN3-207ENST00000489434 ETDCA0A1B0GVM5 59 aa6.76□□□□□ -1.33
SFXN3-207ENST00000489434 HSBP1O75506 76 aa6.76□□□□□ -1.33
SFXN3-207ENST00000489434 SEC61BP60468 96 aaKnown RBP6.76□□□□□ -1.33
SFXN3-207ENST00000489434 KRTAP13-3Q3SY46 172 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms