RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 PLCH1Q4KWH8 1693 aa1.27□□□□□ -2.21
PRPF4-203ENST00000488937 J3QKU1 62 aa1.27□□□□□ -2.21
PRPF4-203ENST00000488937 SPINT3P49223 89 aa1.27□□□□□ -2.21
PRPF4-203ENST00000488937 Q6JHZ5 121 aa1.27□□□□□ -2.21
PRPF4-203ENST00000488937 TIAM2Q8IVF5 1701 aa1.26□□□□□ -2.21
PRPF4-203ENST00000488937 ABCA6Q8N139 1617 aa1.26□□□□□ -2.21
PRPF4-203ENST00000488937 SAMD9LQ8IVG5 1584 aa1.26□□□□□ -2.21
PRPF4-203ENST00000488937 EFCAB6Q5THR3 1501 aa1.26□□□□□ -2.21
PRPF4-203ENST00000488937 SYCP2Q9BX26 1530 aa1.26□□□□□ -2.21
PRPF4-203ENST00000488937 HFM1A2PYH4 1435 aa1.26□□□□□ -2.21
PRPF4-203ENST00000488937 GOLGB1Q14789 3259 aaKnown RBP1.26□□□□□ -2.21
PRPF4-203ENST00000488937 TRBV7-4A0A0J9YYF1 115 aa1.26□□□□□ -2.21
PRPF4-203ENST00000488937 H0Y9P7 68 aa1.26□□□□□ -2.21
PRPF4-203ENST00000488937 PIN1P1O15428 100 aa1.26□□□□□ -2.21
PRPF4-203ENST00000488937 DEFB107AQ8IZN7 70 aa1.26□□□□□ -2.21
PRPF4-203ENST00000488937 UBR3Q6ZT12 1888 aa1.26□□□□□ -2.21
PRPF4-203ENST00000488937 TNRC18O15417 2968 aaPredicted RBP1.26□□□□□ -2.21
PRPF4-203ENST00000488937 USP32Q8NFA0 1604 aa1.26□□□□□ -2.21
PRPF4-203ENST00000488937 BDP1A6H8Y1 2624 aa1.25□□□□□ -2.21
PRPF4-203ENST00000488937 C6orf201Q7Z4U5 140 aa1.25□□□□□ -2.21
PRPF4-203ENST00000488937 A0A0G2JMZ2 1700 aa1.25□□□□□ -2.21
PRPF4-203ENST00000488937 TRANK1O15050 2925 aa1.25□□□□□ -2.21
PRPF4-203ENST00000488937 MAST1Q9Y2H9 1570 aa1.25□□□□□ -2.21
PRPF4-203ENST00000488937 TULP4Q9NRJ4 1543 aa1.25□□□□□ -2.21
PRPF4-203ENST00000488937 QSER1Q2KHR3 1735 aa1.24□□□□□ -2.21
PRPF4-203ENST00000488937 UMAD1C9J7I0 102 aa1.24□□□□□ -2.21
PRPF4-203ENST00000488937 LYNX1P0DP58 116 aa1.24□□□□□ -2.21
PRPF4-203ENST00000488937 GCHFRP30047 84 aa1.24□□□□□ -2.21
PRPF4-203ENST00000488937 CICQ96RK0 1608 aaPredicted RBP1.24□□□□□ -2.21
PRPF4-203ENST00000488937 ANKRD11Q6UB99 2663 aaPredicted RBP1.24□□□□□ -2.21
PRPF4-203ENST00000488937 ASXL3Q9C0F0 2248 aa1.24□□□□□ -2.21
PRPF4-203ENST00000488937 PRXQ9BXM0 1461 aa1.24□□□□□ -2.21
PRPF4-203ENST00000488937 NAV3Q8IVL0 2385 aa1.23□□□□□ -2.21
PRPF4-203ENST00000488937 MAST4O15021 2626 aa1.23□□□□□ -2.21
PRPF4-203ENST00000488937 ANKRD17O75179 2603 aaKnown RBP1.23□□□□□ -2.21
PRPF4-203ENST00000488937 CDC42BPGQ6DT37 1551 aa1.23□□□□□ -2.21
PRPF4-203ENST00000488937 KRTAP12-3P60328 96 aa1.23□□□□□ -2.21
PRPF4-203ENST00000488937 ATP5EP2Q5VTU8 51 aa1.23□□□□□ -2.21
PRPF4-203ENST00000488937 EPG5Q9HCE0 2579 aa1.23□□□□□ -2.21
PRPF4-203ENST00000488937 ITSN2Q9NZM3 1697 aa1.23□□□□□ -2.21
PRPF4-203ENST00000488937 COL6A6A6NMZ7 2263 aa1.22□□□□□ -2.21
PRPF4-203ENST00000488937 RANBP2P49792 3224 aaKnown RBP1.22□□□□□ -2.21
PRPF4-203ENST00000488937 PAPPAQ13219 1627 aa1.22□□□□□ -2.21
PRPF4-203ENST00000488937 PREX2Q70Z35 1606 aa1.22□□□□□ -2.21
PRPF4-203ENST00000488937 MUC3AQ02505 3323 aa1.22□□□□□ -2.21
PRPF4-203ENST00000488937 FLNBO75369 2602 aaKnown RBP1.21□□□□□ -2.22
PRPF4-203ENST00000488937 COL6A3P12111 3177 aa1.21□□□□□ -2.22
PRPF4-203ENST00000488937 TRPM2O94759 1503 aa1.21□□□□□ -2.22
PRPF4-203ENST00000488937 LMTK2Q8IWU2 1503 aa1.21□□□□□ -2.22
PRPF4-203ENST00000488937 CHD6Q8TD26 2715 aa1.21□□□□□ -2.22
PRPF4-203ENST00000488937 A0A087WWC5 75 aa1.21□□□□□ -2.22
PRPF4-203ENST00000488937 TRBV6-1A0A0K0K1D8 114 aa1.21□□□□□ -2.22
PRPF4-203ENST00000488937 A0A1B0GUT8 65 aa1.21□□□□□ -2.22
PRPF4-203ENST00000488937 KRTAP21-3Q3LHN1 58 aa1.21□□□□□ -2.22
PRPF4-203ENST00000488937 NCOR1O75376 2440 aa1.21□□□□□ -2.22
PRPF4-203ENST00000488937 ROS1P08922 2347 aa1.21□□□□□ -2.22
PRPF4-203ENST00000488937 SZT2Q5T011 3432 aa1.21□□□□□ -2.22
PRPF4-203ENST00000488937 AHCTF1Q8WYP5 2266 aa1.2□□□□□ -2.22
PRPF4-203ENST00000488937 SPTBN5Q9NRC6 3674 aaKnown RBP1.2□□□□□ -2.22
PRPF4-203ENST00000488937 NHSQ6T4R5 1651 aa1.2□□□□□ -2.22
PRPF4-203ENST00000488937 VCANP13611 3396 aa1.2□□□□□ -2.22
PRPF4-203ENST00000488937 EIF2AK4Q9P2K8 1649 aaKnown RBP1.2□□□□□ -2.22
PRPF4-203ENST00000488937 HMGA1P17096 107 aaKnown RBP1.2□□□□□ -2.22
PRPF4-203ENST00000488937 IFI27P40305 119 aaPredicted RBP1.2□□□□□ -2.22
PRPF4-203ENST00000488937 HAMPP81172 84 aa1.2□□□□□ -2.22
PRPF4-203ENST00000488937 S100ZQ8WXG8 99 aa1.2□□□□□ -2.22
PRPF4-203ENST00000488937 DOT1LQ8TEK3 1739 aa1.2□□□□□ -2.22
PRPF4-203ENST00000488937 SETXQ7Z333 2677 aaKnown RBP1.19□□□□□ -2.22
PRPF4-203ENST00000488937 LINC00959A0A1B0GUT2 108 aa1.19□□□□□ -2.22
PRPF4-203ENST00000488937 LRRC37AA6NMS7 1700 aa1.19□□□□□ -2.22
PRPF4-203ENST00000488937 GNGT1P63211 74 aa1.19□□□□□ -2.22
PRPF4-203ENST00000488937 PRO3102Q9H379 93 aa1.19□□□□□ -2.22
PRPF4-203ENST00000488937 TSC2P49815 1807 aa1.19□□□□□ -2.22
PRPF4-203ENST00000488937 UNC80Q8N2C7 3258 aa1.19□□□□□ -2.22
PRPF4-203ENST00000488937 FASNP49327 2511 aaKnown RBP1.19□□□□□ -2.22
PRPF4-203ENST00000488937 CEP290O15078 2479 aa1.18□□□□□ -2.22
PRPF4-203ENST00000488937 PTPN13Q12923 2485 aa1.18□□□□□ -2.22
PRPF4-203ENST00000488937 ANGP03950 147 aaKnown RBP1.18□□□□□ -2.22
PRPF4-203ENST00000488937 COX8AP10176 69 aa1.18□□□□□ -2.22
PRPF4-203ENST00000488937 KIF1AQ12756 1690 aa1.18□□□□□ -2.22
PRPF4-203ENST00000488937 MUC6Q6W4X9 2439 aa1.18□□□□□ -2.22
PRPF4-203ENST00000488937 LAMA3Q16787 3333 aa1.18□□□□□ -2.22
PRPF4-203ENST00000488937 JMJD1CQ15652 2540 aa1.18□□□□□ -2.22
PRPF4-203ENST00000488937 NRAPQ86VF7 1730 aa1.18□□□□□ -2.22
PRPF4-203ENST00000488937 CENPFP49454 3210 aa1.17□□□□□ -2.22
PRPF4-203ENST00000488937 USP9XQ93008 2570 aaPredicted RBP1.17□□□□□ -2.22
PRPF4-203ENST00000488937 A0A1B0GU69 56 aa1.17□□□□□ -2.22
PRPF4-203ENST00000488937 FXYD6P3P58550 94 aa1.17□□□□□ -2.22
PRPF4-203ENST00000488937 KRTAP10-4P60372 401 aaPredicted RBP1.17□□□□□ -2.22
PRPF4-203ENST00000488937 Q6ZSA8 131 aa1.17□□□□□ -2.22
PRPF4-203ENST00000488937 ZNF292O60281 2723 aa1.17□□□□□ -2.22
PRPF4-203ENST00000488937 NAV2Q8IVL1 2488 aa1.17□□□□□ -2.22
PRPF4-203ENST00000488937 ZNF462Q96JM2 2506 aa1.17□□□□□ -2.22
PRPF4-203ENST00000488937 TNRC6CQ9HCJ0 1690 aaKnown RBP1.16□□□□□ -2.22
PRPF4-203ENST00000488937 ACACBO00763 2458 aa1.16□□□□□ -2.22
PRPF4-203ENST00000488937 EEA1Q15075 1411 aa1.16□□□□□ -2.22
PRPF4-203ENST00000488937 EYSQ5T1H1 3165 aa1.16□□□□□ -2.22
PRPF4-203ENST00000488937 TRAV21A0A0B4J279 112 aa1.16□□□□□ -2.22
PRPF4-203ENST00000488937 LCE6AA0A183 80 aa1.16□□□□□ -2.22
PRPF4-203ENST00000488937 IFI6P09912 130 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms