RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 LOC110117498A0A087WWA1 95 aa1.65□□□□□ -2.15
SSR1-209ENST00000488834 PDE6GP18545 87 aa1.65□□□□□ -2.15
SSR1-209ENST00000488834 ROMO1P60602 79 aa1.65□□□□□ -2.15
SSR1-209ENST00000488834 C1orf134Q5TEV5 83 aa1.65□□□□□ -2.15
SSR1-209ENST00000488834 LINC00308Q8TCZ7 52 aa1.65□□□□□ -2.15
SSR1-209ENST00000488834 NDUFA4L2Q9NRX3 87 aa1.65□□□□□ -2.15
SSR1-209ENST00000488834 ORMDL1Q9P0S3 153 aa1.65□□□□□ -2.15
SSR1-209ENST00000488834 URB1O60287 2271 aaKnown RBP1.64□□□□□ -2.15
SSR1-209ENST00000488834 TRAV21A0A0B4J279 112 aa1.64□□□□□ -2.15
SSR1-209ENST00000488834 TRBV6-5A0A0K0K1A5 114 aa1.64□□□□□ -2.15
SSR1-209ENST00000488834 ODF3BA8MYP8 253 aa1.64□□□□□ -2.15
SSR1-209ENST00000488834 H0YGG7 62 aa1.64□□□□□ -2.15
SSR1-209ENST00000488834 NCR3O14931 201 aa1.64□□□□□ -2.15
SSR1-209ENST00000488834 NDUFA1O15239 70 aa1.64□□□□□ -2.15
SSR1-209ENST00000488834 CRPP02741 224 aa1.64□□□□□ -2.15
SSR1-209ENST00000488834 SAA2P0DJI9 122 aaPredicted RBP1.64□□□□□ -2.15
SSR1-209ENST00000488834 C20orf166-AS1Q96NR2 134 aa1.64□□□□□ -2.15
SSR1-209ENST00000488834 Q9BRP9 147 aa1.64□□□□□ -2.15
SSR1-209ENST00000488834 PLAC8Q9NZF1 115 aa1.64□□□□□ -2.15
SSR1-209ENST00000488834 ASCC3Q8N3C0 2202 aaKnown RBP1.64□□□□□ -2.15
SSR1-209ENST00000488834 FBN1P35555 2871 aaKnown RBP1.64□□□□□ -2.15
SSR1-209ENST00000488834 CUL9Q8IWT3 2517 aa1.63□□□□□ -2.15
SSR1-209ENST00000488834 TRBV10-1A0A0K0K1A3 114 aa1.63□□□□□ -2.15
SSR1-209ENST00000488834 A0A1W2PNM2 257 aa1.63□□□□□ -2.15
SSR1-209ENST00000488834 IGKV2-29A2NJV5 120 aaPredicted RBP1.63□□□□□ -2.15
SSR1-209ENST00000488834 H3BRN7 92 aa1.63□□□□□ -2.15
SSR1-209ENST00000488834 NDUFB1O75438 58 aa1.63□□□□□ -2.15
SSR1-209ENST00000488834 CNBPP62633 177 aaKnown RBP1.63□□□□□ -2.15
SSR1-209ENST00000488834 DEFB114Q30KQ6 69 aa1.63□□□□□ -2.15
SSR1-209ENST00000488834 FAM74A4Q5TZK3 123 aa1.63□□□□□ -2.15
SSR1-209ENST00000488834 CASC2Q6XLA1 102 aa1.63□□□□□ -2.15
SSR1-209ENST00000488834 PRR15LQ9BU68 103 aa1.63□□□□□ -2.15
SSR1-209ENST00000488834 LINC01558Q9Y6Z2 57 aa1.63□□□□□ -2.15
SSR1-209ENST00000488834 BRWD1Q9NSI6 2320 aa1.62□□□□□ -2.15
SSR1-209ENST00000488834 HAMPP81172 84 aa1.62□□□□□ -2.15
SSR1-209ENST00000488834 TMEM167AQ8TBQ9 72 aa1.62□□□□□ -2.15
SSR1-209ENST00000488834 RPL39LQ96EH5 51 aaKnown RBP1.62□□□□□ -2.15
SSR1-209ENST00000488834 PSORS1C2Q9UIG4 136 aa1.62□□□□□ -2.15
SSR1-209ENST00000488834 NAV3Q8IVL0 2385 aa1.62□□□□□ -2.15
SSR1-209ENST00000488834 J3QKU1 62 aa1.61□□□□□ -2.15
SSR1-209ENST00000488834 RPL39P62891 51 aaKnown RBP1.61□□□□□ -2.15
SSR1-209ENST00000488834 WT1-ASQ06250 92 aa1.61□□□□□ -2.15
SSR1-209ENST00000488834 DEFB113Q30KQ7 82 aa1.61□□□□□ -2.15
SSR1-209ENST00000488834 RPL39P5Q59GN2 51 aa1.61□□□□□ -2.15
SSR1-209ENST00000488834 Q6ZTI0 123 aa1.61□□□□□ -2.15
SSR1-209ENST00000488834 C9orf163Q8N9P6 203 aa1.61□□□□□ -2.15
SSR1-209ENST00000488834 FDCSPQ8NFU4 85 aa1.61□□□□□ -2.15
SSR1-209ENST00000488834 SMIM11BQ8TCY0 68 aa1.61□□□□□ -2.15
SSR1-209ENST00000488834 KLK9Q9UKQ9 250 aa1.61□□□□□ -2.15
SSR1-209ENST00000488834 LENEPQ9Y5L5 61 aa1.61□□□□□ -2.15
SSR1-209ENST00000488834 ASXL3Q9C0F0 2248 aa1.6□□□□□ -2.15
SSR1-209ENST00000488834 IGKV2-40A0A087WW87 121 aaPredicted RBP1.6□□□□□ -2.15
SSR1-209ENST00000488834 DEFB108AA8MXU0 73 aa1.6□□□□□ -2.15
SSR1-209ENST00000488834 IGKV2D-40P01614 121 aaPredicted RBP1.6□□□□□ -2.15
SSR1-209ENST00000488834 TFF1P04155 84 aa1.6□□□□□ -2.15
SSR1-209ENST00000488834 PRB4P10163 310 aaPredicted RBP1.6□□□□□ -2.15
SSR1-209ENST00000488834 LINC00208Q96KT6 92 aa1.6□□□□□ -2.15
SSR1-209ENST00000488834 CCL26Q9Y258 94 aa1.6□□□□□ -2.15
SSR1-209ENST00000488834 SDK1Q7Z5N4 2213 aa1.6□□□□□ -2.15
SSR1-209ENST00000488834 OTOGLQ3ZCN5 2332 aa1.6□□□□□ -2.15
SSR1-209ENST00000488834 PLCE1Q9P212 2302 aa1.6□□□□□ -2.15
SSR1-209ENST00000488834 MED13LQ71F56 2210 aa1.59□□□□□ -2.15
SSR1-209ENST00000488834 DOPEY2Q9Y3R5 2298 aa1.59□□□□□ -2.15
SSR1-209ENST00000488834 A0A087WSZ3 146 aa1.59□□□□□ -2.15
SSR1-209ENST00000488834 I3L2K1 104 aa1.59□□□□□ -2.15
SSR1-209ENST00000488834 LEAP2Q969E1 77 aa1.59□□□□□ -2.15
SSR1-209ENST00000488834 PRO2289Q9P1D8 64 aa1.59□□□□□ -2.15
SSR1-209ENST00000488834 KNL1Q8NG31 2342 aa1.58□□□□□ -2.16
SSR1-209ENST00000488834 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.58□□□□□ -2.16
SSR1-209ENST00000488834 ETDCA0A1B0GVM5 59 aa1.58□□□□□ -2.16
SSR1-209ENST00000488834 CLPSL1A2RUU4 121 aa1.58□□□□□ -2.16
SSR1-209ENST00000488834 NDUFA4O00483 81 aa1.58□□□□□ -2.16
SSR1-209ENST00000488834 MGPP08493 103 aa1.58□□□□□ -2.16
SSR1-209ENST00000488834 SPINK7P58062 85 aa1.58□□□□□ -2.16
SSR1-209ENST00000488834 MIR22HGQ0VDD5 57 aa1.58□□□□□ -2.16
SSR1-209ENST00000488834 Q8TAT8 98 aa1.58□□□□□ -2.16
SSR1-209ENST00000488834 COX7B2Q8TF08 81 aa1.58□□□□□ -2.16
SSR1-209ENST00000488834 ABCA1O95477 2261 aa1.57□□□□□ -2.16
SSR1-209ENST00000488834 ABCA4P78363 2273 aa1.57□□□□□ -2.16
SSR1-209ENST00000488834 TRGV2A0A075B6R0 118 aa1.57□□□□□ -2.16
SSR1-209ENST00000488834 TRBV6-4A0A1B0GX49 114 aa1.57□□□□□ -2.16
SSR1-209ENST00000488834 M0QY20 66 aa1.57□□□□□ -2.16
SSR1-209ENST00000488834 M0R2N4 97 aa1.57□□□□□ -2.16
SSR1-209ENST00000488834 RNASE3P12724 160 aaKnown RBP1.57□□□□□ -2.16
SSR1-209ENST00000488834 CCL18P55774 89 aa1.57□□□□□ -2.16
SSR1-209ENST00000488834 SPAG11BQ08648 103 aa1.57□□□□□ -2.16
SSR1-209ENST00000488834 CSAG1Q6PB30 78 aa1.57□□□□□ -2.16
SSR1-209ENST00000488834 SPAG11AQ6PDA7 123 aa1.57□□□□□ -2.16
SSR1-209ENST00000488834 SPATA8Q6RVD6 105 aa1.57□□□□□ -2.16
SSR1-209ENST00000488834 WFDC10AQ9H1F0 79 aa1.57□□□□□ -2.16
SSR1-209ENST00000488834 KCNQ1DNQ9H478 68 aa1.57□□□□□ -2.16
SSR1-209ENST00000488834 CDKN2A-AS1Q9UH64 79 aa1.57□□□□□ -2.16
SSR1-209ENST00000488834 ICE1Q9Y2F5 2266 aa1.57□□□□□ -2.16
SSR1-209ENST00000488834 AHCTF1Q8WYP5 2266 aa1.56□□□□□ -2.16
SSR1-209ENST00000488834 A0A096LNT2 108 aa1.56□□□□□ -2.16
SSR1-209ENST00000488834 A0A0G2JQZ4 141 aa1.56□□□□□ -2.16
SSR1-209ENST00000488834 K7EIM0 57 aa1.56□□□□□ -2.16
SSR1-209ENST00000488834 COX7BP24311 80 aa1.56□□□□□ -2.16
SSR1-209ENST00000488834 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.56□□□□□ -2.16
SSR1-209ENST00000488834 LINC00575Q6W349 94 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms