RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 SPATA3Q8NHX4 192 aa1.8□□□□□ -2.12
C9orf72-205ENST00000488117 NDUFC2-KCTD14E9PQ53 114 aa1.79□□□□□ -2.12
C9orf72-205ENST00000488117 PRR3P79522 188 aaKnown RBP1.79□□□□□ -2.12
C9orf72-205ENST00000488117 LINC00526Q96FQ7 95 aa1.79□□□□□ -2.12
C9orf72-205ENST00000488117 NF1P21359 2839 aa1.79□□□□□ -2.12
C9orf72-205ENST00000488117 ESRGQ1W209 222 aa1.79□□□□□ -2.12
C9orf72-205ENST00000488117 LINC00167Q96N53 147 aa1.79□□□□□ -2.12
C9orf72-205ENST00000488117 KRTAP9-2Q9BYQ4 174 aa1.79□□□□□ -2.12
C9orf72-205ENST00000488117 XAGE1AQ9HD64 81 aa1.79□□□□□ -2.12
C9orf72-205ENST00000488117 C6orf48Q9UBA6 75 aa1.79□□□□□ -2.12
C9orf72-205ENST00000488117 DNAH1Q9P2D7 4330 aa1.79□□□□□ -2.12
C9orf72-205ENST00000488117 TRBV10-3A0A0K0K1G6 114 aa1.79□□□□□ -2.12
C9orf72-205ENST00000488117 SDIM1Q6ZPB5 146 aa1.79□□□□□ -2.12
C9orf72-205ENST00000488117 ETDCA0A1B0GVM5 59 aa1.79□□□□□ -2.12
C9orf72-205ENST00000488117 C14orf177Q52M58 125 aa1.79□□□□□ -2.12
C9orf72-205ENST00000488117 C10orf25Q5T742 122 aa1.79□□□□□ -2.12
C9orf72-205ENST00000488117 C9orf153Q5TBE3 101 aa1.79□□□□□ -2.12
C9orf72-205ENST00000488117 NBASA2RRP1 2371 aa1.79□□□□□ -2.12
C9orf72-205ENST00000488117 LRBAP50851 2863 aa1.78□□□□□ -2.12
C9orf72-205ENST00000488117 DOPEY2Q9Y3R5 2298 aa1.78□□□□□ -2.12
C9orf72-205ENST00000488117 ANKRD17O75179 2603 aaKnown RBP1.78□□□□□ -2.12
C9orf72-205ENST00000488117 IGKV3D-7A0A0C4DH55 119 aa1.78□□□□□ -2.12
C9orf72-205ENST00000488117 LOC107984640A0A0U1RRK4 108 aa1.78□□□□□ -2.12
C9orf72-205ENST00000488117 F8WEM9 126 aa1.78□□□□□ -2.12
C9orf72-205ENST00000488117 IGLV6-57P01721 117 aa1.78□□□□□ -2.12
C9orf72-205ENST00000488117 Q6ZRU5 148 aa1.78□□□□□ -2.12
C9orf72-205ENST00000488117 NACAE9PAV3 2078 aa1.78□□□□□ -2.12
C9orf72-205ENST00000488117 DNAH10OSP0CZ25 163 aa1.78□□□□□ -2.12
C9orf72-205ENST00000488117 Q6ZQY7 126 aa1.78□□□□□ -2.12
C9orf72-205ENST00000488117 DHRS4-AS1Q9P1J3 65 aa1.78□□□□□ -2.12
C9orf72-205ENST00000488117 GCN1Q92616 2671 aaKnown RBP1.78□□□□□ -2.12
C9orf72-205ENST00000488117 B5MCH6 92 aa1.78□□□□□ -2.13
C9orf72-205ENST00000488117 PRYO14603 147 aa1.78□□□□□ -2.13
C9orf72-205ENST00000488117 ELOF1P60002 83 aaKnown RBP1.78□□□□□ -2.13
C9orf72-205ENST00000488117 HAMPP81172 84 aa1.78□□□□□ -2.13
C9orf72-205ENST00000488117 SMIM20Q8N5G0 67 aa1.78□□□□□ -2.13
C9orf72-205ENST00000488117 OBSCN-AS1Q96MR7 158 aa1.78□□□□□ -2.13
C9orf72-205ENST00000488117 LOC110117498A0A087WWA1 95 aa1.77□□□□□ -2.13
C9orf72-205ENST00000488117 USP17L23D6RBM5 183 aa1.77□□□□□ -2.13
C9orf72-205ENST00000488117 UQCRQO14949 82 aa1.77□□□□□ -2.13
C9orf72-205ENST00000488117 C3orf22Q8N5N4 141 aa1.77□□□□□ -2.13
C9orf72-205ENST00000488117 ZNF462Q96JM2 2506 aa1.77□□□□□ -2.13
C9orf72-205ENST00000488117 C15orf56Q8N910 161 aa1.77□□□□□ -2.13
C9orf72-205ENST00000488117 FUSP35637 526 aaKnown RBP eCLIP1.77□□□□□ -2.13
C9orf72-205ENST00000488117 UBE2BP63146 152 aa1.77□□□□□ -2.13
C9orf72-205ENST00000488117 DEFB105AQ8NG35 78 aa1.77□□□□□ -2.13
C9orf72-205ENST00000488117 SMCR5Q8TEV8 140 aa1.77□□□□□ -2.13
C9orf72-205ENST00000488117 UPK3BQ9BT76 320 aa1.77□□□□□ -2.13
C9orf72-205ENST00000488117 LINC00846Q9NV44 126 aa1.77□□□□□ -2.13
C9orf72-205ENST00000488117 SPTBN4Q9H254 2564 aa1.77□□□□□ -2.13
C9orf72-205ENST00000488117 VPREB1P12018 145 aa1.77□□□□□ -2.13
C9orf72-205ENST00000488117 TM2D3Q9BRN9 247 aa1.77□□□□□ -2.13
C9orf72-205ENST00000488117 LINC00588Q9Y4M8 146 aa1.77□□□□□ -2.13
C9orf72-205ENST00000488117 PIEZO1Q92508 2521 aa1.76□□□□□ -2.13
C9orf72-205ENST00000488117 CCDC179H3BU77 68 aa1.76□□□□□ -2.13
C9orf72-205ENST00000488117 SS18L2Q9UHA2 77 aa1.76□□□□□ -2.13
C9orf72-205ENST00000488117 PLA2G2DQ9UNK4 145 aa1.76□□□□□ -2.13
C9orf72-205ENST00000488117 NAV2Q8IVL1 2488 aa1.76□□□□□ -2.13
C9orf72-205ENST00000488117 PRB2P02812 416 aaPredicted RBP1.76□□□□□ -2.13
C9orf72-205ENST00000488117 TLX1NBP0CAT3 122 aa1.76□□□□□ -2.13
C9orf72-205ENST00000488117 COX7CP15954 63 aa1.76□□□□□ -2.13
C9orf72-205ENST00000488117 Q6ZQT0 140 aa1.76□□□□□ -2.13
C9orf72-205ENST00000488117 FAM19A5Q7Z5A7 132 aaPredicted RBP1.76□□□□□ -2.13
C9orf72-205ENST00000488117 DPH3Q96FX2 82 aa1.76□□□□□ -2.13
C9orf72-205ENST00000488117 CHD8Q9HCK8 2581 aa1.76□□□□□ -2.13
C9orf72-205ENST00000488117 IGSF10Q6WRI0 2623 aa1.76□□□□□ -2.13
C9orf72-205ENST00000488117 SPTAN1Q13813 2472 aaKnown RBP1.76□□□□□ -2.13
C9orf72-205ENST00000488117 NUPR2A6NF83 97 aa1.76□□□□□ -2.13
C9orf72-205ENST00000488117 NREPQ16612 68 aa1.76□□□□□ -2.13
C9orf72-205ENST00000488117 USP24Q9UPU5 2620 aa1.76□□□□□ -2.13
C9orf72-205ENST00000488117 RYR2Q92736 4967 aa1.76□□□□□ -2.13
C9orf72-205ENST00000488117 SERP2Q8N6R1 65 aa1.75□□□□□ -2.13
C9orf72-205ENST00000488117 C7orf33Q8WU49 177 aa1.75□□□□□ -2.13
C9orf72-205ENST00000488117 K7EIL1 84 aa1.75□□□□□ -2.13
C9orf72-205ENST00000488117 ACACBO00763 2458 aa1.75□□□□□ -2.13
C9orf72-205ENST00000488117 CXCL6P80162 114 aa1.75□□□□□ -2.13
C9orf72-205ENST00000488117 REG3GQ6UW15 175 aa1.75□□□□□ -2.13
C9orf72-205ENST00000488117 Q6ZRP5 223 aa1.75□□□□□ -2.13
C9orf72-205ENST00000488117 MRPL55Q7Z7F7 128 aaKnown RBP1.75□□□□□ -2.13
C9orf72-205ENST00000488117 HYDINQ4G0P3 5121 aa1.75□□□□□ -2.13
C9orf72-205ENST00000488117 HUWE1Q7Z6Z7 4374 aaKnown RBP1.75□□□□□ -2.13
C9orf72-205ENST00000488117 KRTAP9-6A0A140TA67 174 aa1.75□□□□□ -2.13
C9orf72-205ENST00000488117 RPL37AP8A6NKH3 93 aa1.75□□□□□ -2.13
C9orf72-205ENST00000488117 KCNQ1DNQ9H478 68 aa1.75□□□□□ -2.13
C9orf72-205ENST00000488117 FAM208BQ5VWN6 2430 aa1.75□□□□□ -2.13
C9orf72-205ENST00000488117 CSPG4Q6UVK1 2322 aa1.75□□□□□ -2.13
C9orf72-205ENST00000488117 A0A1B0GW54 56 aa1.75□□□□□ -2.13
C9orf72-205ENST00000488117 NHLRC4P0CG21 123 aaPredicted RBP1.75□□□□□ -2.13
C9orf72-205ENST00000488117 KRTAP26-1Q6PEX3 210 aa1.75□□□□□ -2.13
C9orf72-205ENST00000488117 LINC00474Q9P2X8 69 aa1.75□□□□□ -2.13
C9orf72-205ENST00000488117 HIVEP2P31629 2446 aa1.75□□□□□ -2.13
C9orf72-205ENST00000488117 CHD6Q8TD26 2715 aa1.75□□□□□ -2.13
C9orf72-205ENST00000488117 IGLV5-37A0A075B6J1 123 aa1.74□□□□□ -2.13
C9orf72-205ENST00000488117 BCE1O60756 84 aa1.74□□□□□ -2.13
C9orf72-205ENST00000488117 C9orf129Q5T035 196 aaKnown RBP1.74□□□□□ -2.13
C9orf72-205ENST00000488117 LCE2AQ5TA79 106 aaPredicted RBP1.74□□□□□ -2.13
C9orf72-205ENST00000488117 Q6ZVQ6 151 aa1.74□□□□□ -2.13
C9orf72-205ENST00000488117 FAM19A1Q7Z5A9 133 aa1.74□□□□□ -2.13
C9orf72-205ENST00000488117 B9D2Q9BPU9 175 aa1.74□□□□□ -2.13
C9orf72-205ENST00000488117 C22orf24Q9Y442 160 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms