RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 RIGQ13278 110 aa4.06□□□□□ -1.76
TNFSF4-203ENST00000488053 CHCHD5Q9BSY4 110 aa4.06□□□□□ -1.76
TNFSF4-203ENST00000488053 CHCHD7Q9BUK0 85 aa4.06□□□□□ -1.76
TNFSF4-203ENST00000488053 IMUPQ9GZP8 106 aa4.06□□□□□ -1.76
TNFSF4-203ENST00000488053 NDUFAF8A1L188 74 aa4.05□□□□□ -1.76
TNFSF4-203ENST00000488053 HIGD1CA8MV81 97 aa4.05□□□□□ -1.76
TNFSF4-203ENST00000488053 PANO1I0J062 215 aa4.05□□□□□ -1.76
TNFSF4-203ENST00000488053 ATP5LO75964 103 aa4.05□□□□□ -1.76
TNFSF4-203ENST00000488053 LTAP01374 205 aa4.05□□□□□ -1.76
TNFSF4-203ENST00000488053 FXYD2P54710 66 aa4.05□□□□□ -1.76
TNFSF4-203ENST00000488053 LINC00173Q6ZV60 143 aa4.05□□□□□ -1.76
TNFSF4-203ENST00000488053 GATD1Q8NB37 220 aa4.05□□□□□ -1.76
TNFSF4-203ENST00000488053 FMC1Q96HJ9 113 aa4.05□□□□□ -1.76
TNFSF4-203ENST00000488053 IGLV10-54A0A075B6I4 117 aa4.04□□□□□ -1.76
TNFSF4-203ENST00000488053 IGLV7-46A0A075B6I9 117 aa4.04□□□□□ -1.76
TNFSF4-203ENST00000488053 UQCRQO14949 82 aa4.04□□□□□ -1.76
TNFSF4-203ENST00000488053 HBDP02042 147 aa4.04□□□□□ -1.76
TNFSF4-203ENST00000488053 NTM-AS1Q6ZSK4 140 aa4.04□□□□□ -1.76
TNFSF4-203ENST00000488053 COX8CQ7Z4L0 72 aa4.04□□□□□ -1.76
TNFSF4-203ENST00000488053 FAM19A5Q7Z5A7 132 aaPredicted RBP4.04□□□□□ -1.76
TNFSF4-203ENST00000488053 LINC00269Q8N2A0 174 aa4.04□□□□□ -1.76
TNFSF4-203ENST00000488053 IFI27L1Q96BM0 104 aa4.04□□□□□ -1.76
TNFSF4-203ENST00000488053 RPP21Q9H633 154 aaKnown RBP4.04□□□□□ -1.76
TNFSF4-203ENST00000488053 TRAV8-4A0A0B4J246 113 aa4.03□□□□□ -1.76
TNFSF4-203ENST00000488053 MYMXA0A1B0GTQ4 84 aa4.03□□□□□ -1.76
TNFSF4-203ENST00000488053 NPYP01303 97 aa4.03□□□□□ -1.76
TNFSF4-203ENST00000488053 PSMB2P49721 201 aa4.03□□□□□ -1.76
TNFSF4-203ENST00000488053 CACNG7P62955 275 aa4.03□□□□□ -1.76
TNFSF4-203ENST00000488053 MIAQ16674 131 aa4.03□□□□□ -1.76
TNFSF4-203ENST00000488053 C9orf153Q5TBE3 101 aa4.03□□□□□ -1.76
TNFSF4-203ENST00000488053 SPANXN1Q5VSR9 72 aa4.03□□□□□ -1.76
TNFSF4-203ENST00000488053 C3orf22Q8N5N4 141 aa4.03□□□□□ -1.76
TNFSF4-203ENST00000488053 C9orf163Q8N9P6 203 aa4.03□□□□□ -1.76
TNFSF4-203ENST00000488053 TMEM101Q96IK0 257 aa4.03□□□□□ -1.76
TNFSF4-203ENST00000488053 HIST1H4GQ99525 98 aa4.03□□□□□ -1.76
TNFSF4-203ENST00000488053 TP73-AS1Q9UF72 201 aa4.03□□□□□ -1.76
TNFSF4-203ENST00000488053 TRBV25-1A0A075B6N4 114 aa4.02□□□□□ -1.77
TNFSF4-203ENST00000488053 TRBV6-1A0A0K0K1D8 114 aa4.02□□□□□ -1.77
TNFSF4-203ENST00000488053 P01737 135 aa4.02□□□□□ -1.77
TNFSF4-203ENST00000488053 IGKCP01834 107 aa4.02□□□□□ -1.77
TNFSF4-203ENST00000488053 MGPP08493 103 aa4.02□□□□□ -1.77
TNFSF4-203ENST00000488053 CHTF8P0CG12 524 aa4.02□□□□□ -1.77
TNFSF4-203ENST00000488053 FOXA3P55318 350 aaPredicted RBP4.02□□□□□ -1.77
TNFSF4-203ENST00000488053 KRTAP26-1Q6PEX3 210 aa4.02□□□□□ -1.77
TNFSF4-203ENST00000488053 KRTAP7-1Q8IUC3 87 aa4.02□□□□□ -1.77
TNFSF4-203ENST00000488053 DPH3Q96FX2 82 aa4.02□□□□□ -1.77
TNFSF4-203ENST00000488053 CARD19Q96LW7 228 aa4.02□□□□□ -1.77
TNFSF4-203ENST00000488053 LINC01600Q96MT4 127 aa4.02□□□□□ -1.77
TNFSF4-203ENST00000488053 FAM240AA0A1B0GVK7 77 aa4.01□□□□□ -1.77
TNFSF4-203ENST00000488053 DPM2O94777 84 aa4.01□□□□□ -1.77
TNFSF4-203ENST00000488053 ACYP1P07311 99 aa4.01□□□□□ -1.77
TNFSF4-203ENST00000488053 MT1HL1P0DM35 61 aa4.01□□□□□ -1.77
TNFSF4-203ENST00000488053 REG3AQ06141 175 aa4.01□□□□□ -1.77
TNFSF4-203ENST00000488053 SDIM1Q6ZPB5 146 aa4.01□□□□□ -1.77
TNFSF4-203ENST00000488053 PCP2Q8IVA1 136 aa4.01□□□□□ -1.77
TNFSF4-203ENST00000488053 LINC00526Q96FQ7 95 aa4.01□□□□□ -1.77
TNFSF4-203ENST00000488053 KIR2DL4Q99706 377 aa4.01□□□□□ -1.77
TNFSF4-203ENST00000488053 PRR34Q9NV39 138 aa4.01□□□□□ -1.77
TNFSF4-203ENST00000488053 KIF25-AS1Q9Y6Z4 181 aa4.01□□□□□ -1.77
TNFSF4-203ENST00000488053 IGLV4-60A0A075B6I1 120 aa4□□□□□ -1.77
TNFSF4-203ENST00000488053 IGKV3OR2-268A0A0C4DH90 116 aa4□□□□□ -1.77
TNFSF4-203ENST00000488053 LOC107984156A0A0G2JMH3 177 aa4□□□□□ -1.77
TNFSF4-203ENST00000488053 TRBV7-7A0A0K0K1E9 115 aa4□□□□□ -1.77
TNFSF4-203ENST00000488053 A0A1B0GUT8 65 aa4□□□□□ -1.77
TNFSF4-203ENST00000488053 H7C423 109 aa4□□□□□ -1.77
TNFSF4-203ENST00000488053 K7ERJ3 54 aa4□□□□□ -1.77
TNFSF4-203ENST00000488053 NCR2O95944 276 aa4□□□□□ -1.77
TNFSF4-203ENST00000488053 FCER1GP30273 86 aa4□□□□□ -1.77
TNFSF4-203ENST00000488053 RPL13AP40429 203 aaKnown RBP4□□□□□ -1.77
TNFSF4-203ENST00000488053 HERVK_113P63121 156 aa4□□□□□ -1.77
TNFSF4-203ENST00000488053 ARL17AQ8IVW1 177 aa4□□□□□ -1.77
TNFSF4-203ENST00000488053 C20orf203Q8NBC4 194 aa4□□□□□ -1.77
TNFSF4-203ENST00000488053 PGLYRP4Q96LB8 373 aa4□□□□□ -1.77
TNFSF4-203ENST00000488053 LRP2P98164 4655 aa4□□□□□ -1.77
TNFSF4-203ENST00000488053 IGHV3-64A0A075B6Q5 118 aa3.99□□□□□ -1.77
TNFSF4-203ENST00000488053 C19orf71A6NCJ1 209 aa3.99□□□□□ -1.77
TNFSF4-203ENST00000488053 M0QY20 66 aa3.99□□□□□ -1.77
TNFSF4-203ENST00000488053 TRACP01848 142 aa3.99□□□□□ -1.77
TNFSF4-203ENST00000488053 IGLC6P0CF74 106 aa3.99□□□□□ -1.77
TNFSF4-203ENST00000488053 KRTAP10-7P60409 375 aaPredicted RBP3.99□□□□□ -1.77
TNFSF4-203ENST00000488053 TMEM258P61165 79 aa3.99□□□□□ -1.77
TNFSF4-203ENST00000488053 CNBPP62633 177 aaKnown RBP3.99□□□□□ -1.77
TNFSF4-203ENST00000488053 TMEM170BQ5T4T1 132 aa3.99□□□□□ -1.77
TNFSF4-203ENST00000488053 ORMDL3Q8N138 153 aa3.99□□□□□ -1.77
TNFSF4-203ENST00000488053 ANKRD29Q8N6D5 301 aa3.99□□□□□ -1.77
TNFSF4-203ENST00000488053 TMEM243Q9BU79 118 aa3.99□□□□□ -1.77
TNFSF4-203ENST00000488053 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.98□□□□□ -1.77
TNFSF4-203ENST00000488053 LINC01546A6NGU7 62 aa3.98□□□□□ -1.77
TNFSF4-203ENST00000488053 UBE2L6O14933 153 aa3.98□□□□□ -1.77
TNFSF4-203ENST00000488053 SLC25A20O43772 301 aa3.98□□□□□ -1.77
TNFSF4-203ENST00000488053 CRYGAP11844 174 aa3.98□□□□□ -1.77
TNFSF4-203ENST00000488053 PLNP26678 52 aa3.98□□□□□ -1.77
TNFSF4-203ENST00000488053 SEC61GP60059 68 aa3.98□□□□□ -1.77
TNFSF4-203ENST00000488053 HIGD2BQ4VC39 106 aa3.98□□□□□ -1.77
TNFSF4-203ENST00000488053 Q6ZRP5 223 aa3.98□□□□□ -1.77
TNFSF4-203ENST00000488053 Q6ZRU5 148 aa3.98□□□□□ -1.77
TNFSF4-203ENST00000488053 AMN1Q8IY45 258 aa3.98□□□□□ -1.77
TNFSF4-203ENST00000488053 NXT2Q9NPJ8 142 aaKnown RBP3.98□□□□□ -1.77
TNFSF4-203ENST00000488053 PRO0628Q9UI54 55 aa3.98□□□□□ -1.77
TNFSF4-203ENST00000488053 IGKV2-24A0A0C4DH68 120 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms