RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 MIR7-3HGQ8N6C7 128 aa1.99□□□□□ -2.09
GPNMB-212ENST00000487890 LINC00526Q96FQ7 95 aa1.99□□□□□ -2.09
GPNMB-212ENST00000487890 DSCR8Q96T75 97 aa1.99□□□□□ -2.09
GPNMB-212ENST00000487890 TXNDC17Q9BRA2 123 aa1.99□□□□□ -2.09
GPNMB-212ENST00000487890 PRO0255Q9UI72 69 aa1.99□□□□□ -2.09
GPNMB-212ENST00000487890 EPDR1Q9UM22 224 aa1.99□□□□□ -2.09
GPNMB-212ENST00000487890 KIAA1109Q2LD37 5005 aa1.99□□□□□ -2.09
GPNMB-212ENST00000487890 LRP1BQ9NZR2 4599 aa1.99□□□□□ -2.09
GPNMB-212ENST00000487890 IGHV3-73A0A0B4J1V6 119 aa1.98□□□□□ -2.09
GPNMB-212ENST00000487890 TRAV21A0A0B4J279 112 aa1.98□□□□□ -2.09
GPNMB-212ENST00000487890 RBAKDNA6NC62 111 aa1.98□□□□□ -2.09
GPNMB-212ENST00000487890 TMEM262E9PQX1 116 aa1.98□□□□□ -2.09
GPNMB-212ENST00000487890 G3V3Q6 166 aa1.98□□□□□ -2.09
GPNMB-212ENST00000487890 H3BNG1 76 aa1.98□□□□□ -2.09
GPNMB-212ENST00000487890 M0R2P5 195 aa1.98□□□□□ -2.09
GPNMB-212ENST00000487890 UQCRQO14949 82 aa1.98□□□□□ -2.09
GPNMB-212ENST00000487890 GNRH2O43555 120 aa1.98□□□□□ -2.09
GPNMB-212ENST00000487890 SRP19P09132 144 aaKnown RBP1.98□□□□□ -2.09
GPNMB-212ENST00000487890 HIST1H2BOP23527 126 aa1.98□□□□□ -2.09
GPNMB-212ENST00000487890 S100A4P26447 101 aaKnown RBP1.98□□□□□ -2.09
GPNMB-212ENST00000487890 GCHFRP30047 84 aa1.98□□□□□ -2.09
GPNMB-212ENST00000487890 HIST1H2BBP33778 126 aa1.98□□□□□ -2.09
GPNMB-212ENST00000487890 HINT1P49773 126 aaPredicted RBP1.98□□□□□ -2.09
GPNMB-212ENST00000487890 HIST1H2BDP58876 126 aa1.98□□□□□ -2.09
GPNMB-212ENST00000487890 HIST1H2BCP62807 126 aa1.98□□□□□ -2.09
GPNMB-212ENST00000487890 HIST2H2BEQ16778 126 aa1.98□□□□□ -2.09
GPNMB-212ENST00000487890 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.98□□□□□ -2.09
GPNMB-212ENST00000487890 FAM104BQ5XKR9 115 aa1.98□□□□□ -2.09
GPNMB-212ENST00000487890 WFDC10BQ8IUB3 73 aa1.98□□□□□ -2.09
GPNMB-212ENST00000487890 LYPD1Q8N2G4 141 aa1.98□□□□□ -2.09
GPNMB-212ENST00000487890 HIST1H2BHQ93079 126 aa1.98□□□□□ -2.09
GPNMB-212ENST00000487890 HIST1H2BNQ99877 126 aa1.98□□□□□ -2.09
GPNMB-212ENST00000487890 HIST1H2BMQ99879 126 aa1.98□□□□□ -2.09
GPNMB-212ENST00000487890 LINC00467Q9BRT7 94 aa1.98□□□□□ -2.09
GPNMB-212ENST00000487890 UPK3BQ9BT76 320 aa1.98□□□□□ -2.09
GPNMB-212ENST00000487890 UQCR10Q9UDW1 63 aa1.98□□□□□ -2.09
GPNMB-212ENST00000487890 LENEPQ9Y5L5 61 aa1.98□□□□□ -2.09
GPNMB-212ENST00000487890 LY96Q9Y6Y9 160 aa1.98□□□□□ -2.09
GPNMB-212ENST00000487890 PCLOQ9Y6V0 5065 aa1.98□□□□□ -2.09
GPNMB-212ENST00000487890 DNAH5Q8TE73 4624 aa1.98□□□□□ -2.09
GPNMB-212ENST00000487890 TRAV1-1A0A0B4J248 108 aa1.97□□□□□ -2.09
GPNMB-212ENST00000487890 TRBV27A0A0K0K1C4 114 aa1.97□□□□□ -2.09
GPNMB-212ENST00000487890 IGHV3-30P01768 117 aa1.97□□□□□ -2.09
GPNMB-212ENST00000487890 IGHV3-33P01772 117 aa1.97□□□□□ -2.09
GPNMB-212ENST00000487890 TRACP01848 142 aa1.97□□□□□ -2.09
GPNMB-212ENST00000487890 TRGC1P0CF51 173 aa1.97□□□□□ -2.09
GPNMB-212ENST00000487890 IGHV3-30-3P0DP02 117 aa1.97□□□□□ -2.09
GPNMB-212ENST00000487890 IGHV3-30-5P0DP03 117 aa1.97□□□□□ -2.09
GPNMB-212ENST00000487890 CRYGAP11844 174 aa1.97□□□□□ -2.09
GPNMB-212ENST00000487890 UBE2BP63146 152 aa1.97□□□□□ -2.09
GPNMB-212ENST00000487890 Q0VG73 95 aa1.97□□□□□ -2.09
GPNMB-212ENST00000487890 SS18Q15532 418 aa1.97□□□□□ -2.09
GPNMB-212ENST00000487890 LGALSLQ3ZCW2 172 aaPredicted RBP1.97□□□□□ -2.09
GPNMB-212ENST00000487890 LINC01554Q52M75 96 aa1.97□□□□□ -2.09
GPNMB-212ENST00000487890 LYPD5Q6UWN5 251 aa1.97□□□□□ -2.09
GPNMB-212ENST00000487890 SH2D6Q7Z4S9 175 aa1.97□□□□□ -2.09
GPNMB-212ENST00000487890 TEN1Q86WV5 123 aa1.97□□□□□ -2.09
GPNMB-212ENST00000487890 DAND5Q8N907 189 aa1.97□□□□□ -2.09
GPNMB-212ENST00000487890 PRELID3AQ96N28 172 aa1.97□□□□□ -2.09
GPNMB-212ENST00000487890 TMEM167BQ9NRX6 74 aa1.97□□□□□ -2.09
GPNMB-212ENST00000487890 IL36BQ9NZH7 164 aa1.97□□□□□ -2.09
GPNMB-212ENST00000487890 SERP1Q9Y6X1 66 aa1.97□□□□□ -2.09
GPNMB-212ENST00000487890 APOBP04114 4563 aaKnown RBP1.96□□□□□ -2.1
GPNMB-212ENST00000487890 IGKV2D-24A0A075B6R9 120 aa1.96□□□□□ -2.1
GPNMB-212ENST00000487890 TMSB15BA0A087X1C1 80 aa1.96□□□□□ -2.1
GPNMB-212ENST00000487890 H3BT86 120 aa1.96□□□□□ -2.1
GPNMB-212ENST00000487890 H3BVH4 76 aa1.96□□□□□ -2.1
GPNMB-212ENST00000487890 LECT2O14960 151 aa1.96□□□□□ -2.1
GPNMB-212ENST00000487890 HIST1H2BKO60814 126 aa1.96□□□□□ -2.1
GPNMB-212ENST00000487890 HIST1H2BJP06899 126 aa1.96□□□□□ -2.1
GPNMB-212ENST00000487890 ADCYAP1P18509 176 aa1.96□□□□□ -2.1
GPNMB-212ENST00000487890 ASIPP42127 132 aa1.96□□□□□ -2.1
GPNMB-212ENST00000487890 HAMPP81172 84 aa1.96□□□□□ -2.1
GPNMB-212ENST00000487890 RHOHQ15669 191 aa1.96□□□□□ -2.1
GPNMB-212ENST00000487890 FAM74A4Q5TZK3 123 aa1.96□□□□□ -2.1
GPNMB-212ENST00000487890 CFAP126Q5VTH2 177 aa1.96□□□□□ -2.1
GPNMB-212ENST00000487890 RPL7L1Q6DKI1 246 aaKnown RBP1.96□□□□□ -2.1
GPNMB-212ENST00000487890 SOSTDC1Q6X4U4 206 aa1.96□□□□□ -2.1
GPNMB-212ENST00000487890 C7orf65Q6ZTY9 151 aa1.96□□□□□ -2.1
GPNMB-212ENST00000487890 FP248Q71RG6 208 aaPredicted RBP1.96□□□□□ -2.1
GPNMB-212ENST00000487890 SCXQ7RTU7 201 aa1.96□□□□□ -2.1
GPNMB-212ENST00000487890 ADM2Q7Z4H4 148 aa1.96□□□□□ -2.1
GPNMB-212ENST00000487890 ST20-AS1Q8NBB2 130 aa1.96□□□□□ -2.1
GPNMB-212ENST00000487890 OR2T35Q8NGX2 323 aa1.96□□□□□ -2.1
GPNMB-212ENST00000487890 TVP23CQ96ET8 276 aa1.96□□□□□ -2.1
GPNMB-212ENST00000487890 AQP10Q96PS8 301 aa1.96□□□□□ -2.1
GPNMB-212ENST00000487890 C20orf78Q9BR46 151 aa1.96□□□□□ -2.1
GPNMB-212ENST00000487890 TTTY13Q9BZ97 58 aa1.96□□□□□ -2.1
GPNMB-212ENST00000487890 ABCA13Q86UQ4 5058 aa1.96□□□□□ -2.1
GPNMB-212ENST00000487890 MYCBP2O75592 4640 aa1.95□□□□□ -2.1
GPNMB-212ENST00000487890 A0A087WTM6 91 aa1.95□□□□□ -2.1
GPNMB-212ENST00000487890 CTXND1A0A1B0GTU2 59 aa1.95□□□□□ -2.1
GPNMB-212ENST00000487890 SH2D1AO60880 128 aa1.95□□□□□ -2.1
GPNMB-212ENST00000487890 SNCGO76070 127 aa1.95□□□□□ -2.1
GPNMB-212ENST00000487890 TCL1BO95988 128 aa1.95□□□□□ -2.1
GPNMB-212ENST00000487890 HBDP02042 147 aa1.95□□□□□ -2.1
GPNMB-212ENST00000487890 MGST1P10620 155 aaKnown RBP1.95□□□□□ -2.1
GPNMB-212ENST00000487890 NPC2P61916 151 aa1.95□□□□□ -2.1
GPNMB-212ENST00000487890 UBE2G1P62253 170 aa1.95□□□□□ -2.1
GPNMB-212ENST00000487890 CCL20P78556 96 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms