RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 IMUPQ9GZP8 106 aa2.38□□□□□ -2.03
BRCA1-217ENST00000487825 CYSLTR1Q9Y271 337 aa2.38□□□□□ -2.03
BRCA1-217ENST00000487825 MDN1Q9NU22 5596 aa2.37□□□□□ -2.03
BRCA1-217ENST00000487825 IGLV4-69A0A075B6H9 119 aa2.37□□□□□ -2.03
BRCA1-217ENST00000487825 IGKV3OR2-268A0A0C4DH90 116 aa2.37□□□□□ -2.03
BRCA1-217ENST00000487825 LST1O00453 97 aa2.37□□□□□ -2.03
BRCA1-217ENST00000487825 CXorf1O96002 111 aa2.37□□□□□ -2.03
BRCA1-217ENST00000487825 KRTAP2-3P0C7H8 128 aa2.37□□□□□ -2.03
BRCA1-217ENST00000487825 AKR1D1P51857 326 aa2.37□□□□□ -2.03
BRCA1-217ENST00000487825 LINC00313P59037 77 aa2.37□□□□□ -2.03
BRCA1-217ENST00000487825 GABARAPL2P60520 117 aa2.37□□□□□ -2.03
BRCA1-217ENST00000487825 PCOTHQ58A44 107 aa2.37□□□□□ -2.03
BRCA1-217ENST00000487825 HRCT1Q6UXD1 115 aa2.37□□□□□ -2.03
BRCA1-217ENST00000487825 MIR17HGQ75NE6 70 aa2.37□□□□□ -2.03
BRCA1-217ENST00000487825 DAND5Q8N907 189 aa2.37□□□□□ -2.03
BRCA1-217ENST00000487825 OR10D4PQ8NGN7 298 aa2.37□□□□□ -2.03
BRCA1-217ENST00000487825 OR5C1Q8NGR4 320 aa2.37□□□□□ -2.03
BRCA1-217ENST00000487825 KRTAP2-4Q9BYR9 128 aa2.37□□□□□ -2.03
BRCA1-217ENST00000487825 NMES1Q9C002 83 aa2.37□□□□□ -2.03
BRCA1-217ENST00000487825 ZFP30Q9Y2G7 519 aa2.37□□□□□ -2.03
BRCA1-217ENST00000487825 A8MUN3 132 aa2.36□□□□□ -2.03
BRCA1-217ENST00000487825 B4DEV8 164 aa2.36□□□□□ -2.03
BRCA1-217ENST00000487825 NDUFC2-KCTD14E9PQ53 114 aa2.36□□□□□ -2.03
BRCA1-217ENST00000487825 NUPR1O60356 82 aa2.36□□□□□ -2.03
BRCA1-217ENST00000487825 DPM2O94777 84 aa2.36□□□□□ -2.03
BRCA1-217ENST00000487825 LTAP01374 205 aa2.36□□□□□ -2.03
BRCA1-217ENST00000487825 ZNF56Q15929 161 aa2.36□□□□□ -2.03
BRCA1-217ENST00000487825 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
BRCA1-217ENST00000487825 SPAG11AQ6PDA7 123 aa2.36□□□□□ -2.03
BRCA1-217ENST00000487825 RASL11AQ6T310 242 aa2.36□□□□□ -2.03
BRCA1-217ENST00000487825 TEX261Q6UWH6 196 aa2.36□□□□□ -2.03
BRCA1-217ENST00000487825 CMTM2Q8TAZ6 248 aa2.36□□□□□ -2.03
BRCA1-217ENST00000487825 HYLS1Q96M11 299 aa2.36□□□□□ -2.03
BRCA1-217ENST00000487825 WDR61Q9GZS3 305 aaKnown RBP2.36□□□□□ -2.03
BRCA1-217ENST00000487825 ZNF706Q9Y5V0 76 aaPredicted RBP2.36□□□□□ -2.03
BRCA1-217ENST00000487825 GPR98Q8WXG9 6306 aa2.35□□□□□ -2.03
BRCA1-217ENST00000487825 IGKV2D-26A0A0A0MRZ7 120 aa2.35□□□□□ -2.03
BRCA1-217ENST00000487825 C19orf71A6NCJ1 209 aa2.35□□□□□ -2.03
BRCA1-217ENST00000487825 J3QQQ9 107 aa2.35□□□□□ -2.03
BRCA1-217ENST00000487825 COX7A2LO14548 114 aa2.35□□□□□ -2.03
BRCA1-217ENST00000487825 OR7C2O60412 319 aa2.35□□□□□ -2.03
BRCA1-217ENST00000487825 ARMS2P0C7Q2 107 aa2.35□□□□□ -2.03
BRCA1-217ENST00000487825 SMIM17P0DL12 118 aa2.35□□□□□ -2.03
BRCA1-217ENST00000487825 TGFBR1P36897 503 aa2.35□□□□□ -2.03
BRCA1-217ENST00000487825 RPL28P46779 137 aaKnown RBP2.35□□□□□ -2.03
BRCA1-217ENST00000487825 DEFA3P59666 94 aa2.35□□□□□ -2.03
BRCA1-217ENST00000487825 UBE2L3P68036 154 aaKnown RBP2.35□□□□□ -2.03
BRCA1-217ENST00000487825 SSBP1Q04837 148 aaKnown RBP2.35□□□□□ -2.03
BRCA1-217ENST00000487825 Q5XG85 94 aa2.35□□□□□ -2.03
BRCA1-217ENST00000487825 KTN1-AS1Q86SY8 53 aa2.35□□□□□ -2.03
BRCA1-217ENST00000487825 PRR15Q8IV56 129 aa2.35□□□□□ -2.03
BRCA1-217ENST00000487825 TOMM6Q96B49 74 aa2.35□□□□□ -2.03
BRCA1-217ENST00000487825 CAMK2N2Q96S95 79 aa2.35□□□□□ -2.03
BRCA1-217ENST00000487825 PSMG3Q9BT73 122 aaPredicted RBP2.35□□□□□ -2.03
BRCA1-217ENST00000487825 CST9LQ9H4G1 147 aa2.35□□□□□ -2.03
BRCA1-217ENST00000487825 OTORQ9NRC9 128 aa2.35□□□□□ -2.03
BRCA1-217ENST00000487825 TNFSF18Q9UNG2 199 aa2.35□□□□□ -2.03
BRCA1-217ENST00000487825 UBE2D4Q9Y2X8 147 aa2.35□□□□□ -2.03
BRCA1-217ENST00000487825 TRBV20OR9-2A0A075B6H5 130 aa2.34□□□□□ -2.03
BRCA1-217ENST00000487825 TRAV9-1A0A075B6T8 112 aa2.34□□□□□ -2.03
BRCA1-217ENST00000487825 UBE2L5PA0A1B0GUS4 154 aa2.34□□□□□ -2.03
BRCA1-217ENST00000487825 M0R143 59 aa2.34□□□□□ -2.03
BRCA1-217ENST00000487825 UBE2L6O14933 153 aa2.34□□□□□ -2.03
BRCA1-217ENST00000487825 NCR2O95944 276 aa2.34□□□□□ -2.03
BRCA1-217ENST00000487825 MT2AP02795 61 aa2.34□□□□□ -2.03
BRCA1-217ENST00000487825 AKAIN1P0CW23 69 aa2.34□□□□□ -2.03
BRCA1-217ENST00000487825 FGF7P21781 194 aa2.34□□□□□ -2.03
BRCA1-217ENST00000487825 XCL1P47992 114 aa2.34□□□□□ -2.03
BRCA1-217ENST00000487825 FAM74A1Q5RGS3 127 aa2.34□□□□□ -2.03
BRCA1-217ENST00000487825 LYRM7Q5U5X0 104 aa2.34□□□□□ -2.03
BRCA1-217ENST00000487825 AMMECR1LQ6DCA0 310 aa2.34□□□□□ -2.03
BRCA1-217ENST00000487825 HIST1H2BAQ96A08 127 aa2.34□□□□□ -2.03
BRCA1-217ENST00000487825 SLC25A21Q9BQT8 299 aaPredicted RBP2.34□□□□□ -2.03
BRCA1-217ENST00000487825 A0A1B0GW54 56 aa2.33□□□□□ -2.04
BRCA1-217ENST00000487825 C7orf66A4D0T2 115 aa2.33□□□□□ -2.04
BRCA1-217ENST00000487825 J3QR89 54 aa2.33□□□□□ -2.04
BRCA1-217ENST00000487825 CCL25O15444 150 aa2.33□□□□□ -2.04
BRCA1-217ENST00000487825 TLX1NBP0CAT3 122 aa2.33□□□□□ -2.04
BRCA1-217ENST00000487825 TPT1P13693 172 aaKnown RBP2.33□□□□□ -2.04
BRCA1-217ENST00000487825 SLC25A34Q6PIV7 304 aa2.33□□□□□ -2.04
BRCA1-217ENST00000487825 CAMK2N1Q7Z7J9 78 aa2.33□□□□□ -2.04
BRCA1-217ENST00000487825 SFT2D1Q8WV19 159 aa2.33□□□□□ -2.04
BRCA1-217ENST00000487825 NPCDR1Q9BY65 106 aa2.33□□□□□ -2.04
BRCA1-217ENST00000487825 C11orf1Q9H5F2 150 aa2.33□□□□□ -2.04
BRCA1-217ENST00000487825 SCP2D1Q9UJQ7 156 aa2.33□□□□□ -2.04
BRCA1-217ENST00000487825 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
BRCA1-217ENST00000487825 TRBV7-6A0A0J9YX20 115 aa2.32□□□□□ -2.04
BRCA1-217ENST00000487825 LINC00959A0A1B0GUT2 108 aa2.32□□□□□ -2.04
BRCA1-217ENST00000487825 BCE1O60756 84 aa2.32□□□□□ -2.04
BRCA1-217ENST00000487825 SFT2D2O95562 160 aa2.32□□□□□ -2.04
BRCA1-217ENST00000487825 TRGC2P03986 189 aa2.32□□□□□ -2.04
BRCA1-217ENST00000487825 MT1FP04733 61 aa2.32□□□□□ -2.04
BRCA1-217ENST00000487825 SRP19P09132 144 aaKnown RBP2.32□□□□□ -2.04
BRCA1-217ENST00000487825 NTF3P20783 257 aa2.32□□□□□ -2.04
BRCA1-217ENST00000487825 GNG4P50150 75 aa2.32□□□□□ -2.04
BRCA1-217ENST00000487825 TMBIM6P55061 237 aa2.32□□□□□ -2.04
BRCA1-217ENST00000487825 LCA10Q71F78 164 aa2.32□□□□□ -2.04
BRCA1-217ENST00000487825 C15orf40Q8WUR7 153 aa2.32□□□□□ -2.04
BRCA1-217ENST00000487825 IMMP2LQ96T52 175 aa2.32□□□□□ -2.04
BRCA1-217ENST00000487825 SND1-IT1Q9HBX3 110 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms