RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 A0A0J9YXY3 114 aa7.18□□□□□ -1.26
TRIM56-204ENST00000487252 GAGE12JA6NER3 117 aa7.18□□□□□ -1.26
TRIM56-204ENST00000487252 GAGE4Q13068 117 aa7.18□□□□□ -1.26
TRIM56-204ENST00000487252 GAGE5Q13069 117 aa7.18□□□□□ -1.26
TRIM56-204ENST00000487252 PRR4Q16378 134 aa7.18□□□□□ -1.26
TRIM56-204ENST00000487252 GAGE13Q4V321 117 aa7.18□□□□□ -1.26
TRIM56-204ENST00000487252 RNASE13Q5GAN3 156 aaKnown RBP7.18□□□□□ -1.26
TRIM56-204ENST00000487252 DPH3Q96FX2 82 aa7.18□□□□□ -1.26
TRIM56-204ENST00000487252 PSORS1C2Q9UIG4 136 aa7.18□□□□□ -1.26
TRIM56-204ENST00000487252 MUC17Q685J3 4493 aa7.17□□□□□ -1.26
TRIM56-204ENST00000487252 LINC00242Q5T6M2 205 aa7.17□□□□□ -1.26
TRIM56-204ENST00000487252 LITAFQ99732 161 aa7.17□□□□□ -1.26
TRIM56-204ENST00000487252 TMEM243Q9BU79 118 aa7.17□□□□□ -1.26
TRIM56-204ENST00000487252 C1orf43Q9BWL3 253 aa7.17□□□□□ -1.26
TRIM56-204ENST00000487252 CDC42SE2Q9NRR3 84 aa7.17□□□□□ -1.26
TRIM56-204ENST00000487252 IGLV5-39A0A0G2JS06 123 aa7.16□□□□□ -1.26
TRIM56-204ENST00000487252 TIMM17BO60830 172 aa7.16□□□□□ -1.26
TRIM56-204ENST00000487252 HERVK_113P63121 156 aa7.16□□□□□ -1.26
TRIM56-204ENST00000487252 GEMIN7Q9H840 131 aaKnown RBP7.16□□□□□ -1.26
TRIM56-204ENST00000487252 TMEM238C9JI98 176 aa7.15□□□□□ -1.26
TRIM56-204ENST00000487252 ENHOQ6UWT2 76 aa7.15□□□□□ -1.26
TRIM56-204ENST00000487252 SPANXDQ9BXN6 97 aa7.15□□□□□ -1.26
TRIM56-204ENST00000487252 SPANXCQ9NY87 97 aa7.15□□□□□ -1.26
TRIM56-204ENST00000487252 CDKN2A-AS1Q9UH64 79 aa7.15□□□□□ -1.26
TRIM56-204ENST00000487252 NDUFA12Q9UI09 145 aa7.15□□□□□ -1.26
TRIM56-204ENST00000487252 IGHV3-64A0A075B6Q5 118 aa7.14□□□□□ -1.27
TRIM56-204ENST00000487252 NDUFA1O15239 70 aa7.14□□□□□ -1.27
TRIM56-204ENST00000487252 SPINK8P0C7L1 97 aa7.14□□□□□ -1.27
TRIM56-204ENST00000487252 CFC1BP0CG36 223 aa7.14□□□□□ -1.27
TRIM56-204ENST00000487252 CFC1P0CG37 223 aa7.14□□□□□ -1.27
TRIM56-204ENST00000487252 COX6A2Q02221 97 aa7.14□□□□□ -1.27
TRIM56-204ENST00000487252 TMEM101Q96IK0 257 aa7.14□□□□□ -1.27
TRIM56-204ENST00000487252 TRBV6-8A0A0A6YYG3 113 aa7.13□□□□□ -1.27
TRIM56-204ENST00000487252 A0A0B4J2C4 111 aa7.13□□□□□ -1.27
TRIM56-204ENST00000487252 TSPAN13O95857 204 aa7.13□□□□□ -1.27
TRIM56-204ENST00000487252 RPL24P83731 157 aaKnown RBP7.13□□□□□ -1.27
TRIM56-204ENST00000487252 LCE3BQ5TA77 95 aa7.13□□□□□ -1.27
TRIM56-204ENST00000487252 KRTAP26-1Q6PEX3 210 aa7.13□□□□□ -1.27
TRIM56-204ENST00000487252 EIF4EBP3O60516 100 aaPredicted RBP7.12□□□□□ -1.27
TRIM56-204ENST00000487252 SLPIP03973 132 aa7.12□□□□□ -1.27
TRIM56-204ENST00000487252 OCIAD2Q56VL3 154 aa7.12□□□□□ -1.27
TRIM56-204ENST00000487252 MUSTN1Q8IVN3 82 aa7.12□□□□□ -1.27
TRIM56-204ENST00000487252 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.11□□□□□ -1.27
TRIM56-204ENST00000487252 A4D1N5 150 aa7.11□□□□□ -1.27
TRIM56-204ENST00000487252 SMIM1B2RUZ4 78 aa7.11□□□□□ -1.27
TRIM56-204ENST00000487252 UBE2L6O14933 153 aa7.11□□□□□ -1.27
TRIM56-204ENST00000487252 RBX1P62877 108 aa7.11□□□□□ -1.27
TRIM56-204ENST00000487252 MIAQ16674 131 aa7.11□□□□□ -1.27
TRIM56-204ENST00000487252 PRO1854Q9UHT4 67 aa7.11□□□□□ -1.27
TRIM56-204ENST00000487252 PRO0461Q9UI25 63 aa7.11□□□□□ -1.27
TRIM56-204ENST00000487252 F8W1H4 67 aa7.1□□□□□ -1.27
TRIM56-204ENST00000487252 APOMO95445 188 aa7.1□□□□□ -1.27
TRIM56-204ENST00000487252 IFITM1P13164 125 aa7.1□□□□□ -1.27
TRIM56-204ENST00000487252 ADAMTSL4-AS1Q5T5F5 129 aa7.1□□□□□ -1.27
TRIM56-204ENST00000487252 Q6ZRP5 223 aa7.1□□□□□ -1.27
TRIM56-204ENST00000487252 PRR26Q8N8Z3 221 aa7.1□□□□□ -1.27
TRIM56-204ENST00000487252 PPDPFQ9H3Y8 114 aa7.1□□□□□ -1.27
TRIM56-204ENST00000487252 TRAV13-1A0A0B4J241 112 aa7.09□□□□□ -1.27
TRIM56-204ENST00000487252 LYRM7Q5U5X0 104 aa7.09□□□□□ -1.27
TRIM56-204ENST00000487252 ZNF625Q96I27 306 aaPredicted RBP7.09□□□□□ -1.27
TRIM56-204ENST00000487252 GAGE6Q13070 117 aa7.08□□□□□ -1.28
TRIM56-204ENST00000487252 IGLV4-60A0A075B6I1 120 aa7.07□□□□□ -1.28
TRIM56-204ENST00000487252 TRBV20-1A0A075B6N2 111 aa7.07□□□□□ -1.28
TRIM56-204ENST00000487252 A0A1B0GUV1 79 aa7.07□□□□□ -1.28
TRIM56-204ENST00000487252 K7ERU9 68 aa7.07□□□□□ -1.28
TRIM56-204ENST00000487252 HERV-K104P63124 156 aa7.07□□□□□ -1.28
TRIM56-204ENST00000487252 CHCHD5Q9BSY4 110 aa7.07□□□□□ -1.28
TRIM56-204ENST00000487252 IGHV3OR16-9A0A0B4J2B5 98 aa7.06□□□□□ -1.28
TRIM56-204ENST00000487252 H3BMG7 143 aa7.06□□□□□ -1.28
TRIM56-204ENST00000487252 LINC01547P58512 204 aaPredicted RBP7.06□□□□□ -1.28
TRIM56-204ENST00000487252 ERG28Q9UKR5 140 aa7.06□□□□□ -1.28
TRIM56-204ENST00000487252 CRPP02741 224 aa7.05□□□□□ -1.28
TRIM56-204ENST00000487252 LINC01561Q8N1V8 128 aa7.05□□□□□ -1.28
TRIM56-204ENST00000487252 CBY1Q9Y3M2 126 aa7.05□□□□□ -1.28
TRIM56-204ENST00000487252 A0A087WZ39 114 aa7.04□□□□□ -1.28
TRIM56-204ENST00000487252 LOC107984156A0A0G2JMH3 177 aa7.04□□□□□ -1.28
TRIM56-204ENST00000487252 TRBV30A0A0K0K1B3 111 aa7.04□□□□□ -1.28
TRIM56-204ENST00000487252 LINC00959A0A1B0GUT2 108 aa7.04□□□□□ -1.28
TRIM56-204ENST00000487252 PRSS2P07478 247 aa7.04□□□□□ -1.28
TRIM56-204ENST00000487252 ARL17AQ8IVW1 177 aa7.04□□□□□ -1.28
TRIM56-204ENST00000487252 LINC00308Q8TCZ7 52 aa7.04□□□□□ -1.28
TRIM56-204ENST00000487252 KRTAP4-12Q9BQ66 201 aa7.04□□□□□ -1.28
TRIM56-204ENST00000487252 PRR34Q9NV39 138 aa7.04□□□□□ -1.28
TRIM56-204ENST00000487252 M0QXV9 152 aa7.03□□□□□ -1.28
TRIM56-204ENST00000487252 TCL1BO95988 128 aa7.03□□□□□ -1.28
TRIM56-204ENST00000487252 PSMB2P49721 201 aa7.03□□□□□ -1.28
TRIM56-204ENST00000487252 COX7B2Q8TF08 81 aa7.03□□□□□ -1.28
TRIM56-204ENST00000487252 COPS9Q8WXC6 57 aa7.03□□□□□ -1.28
TRIM56-204ENST00000487252 IGLV1-50A0A075B6I6 118 aa7.01□□□□□ -1.29
TRIM56-204ENST00000487252 IGKV2-24A0A0C4DH68 120 aa7.01□□□□□ -1.29
TRIM56-204ENST00000487252 SOSTDC1Q6X4U4 206 aa7.01□□□□□ -1.29
TRIM56-204ENST00000487252 IGLV10-54A0A075B6I4 117 aa7□□□□□ -1.29
TRIM56-204ENST00000487252 ANGP03950 147 aaKnown RBP7□□□□□ -1.29
TRIM56-204ENST00000487252 SS18Q15532 418 aa7□□□□□ -1.29
TRIM56-204ENST00000487252 SFTA2Q6UW10 78 aa7□□□□□ -1.29
TRIM56-204ENST00000487252 KRTAP9-9Q9BYP9 154 aa7□□□□□ -1.29
TRIM56-204ENST00000487252 KRTAP9-4Q9BYQ2 154 aa7□□□□□ -1.29
TRIM56-204ENST00000487252 TRIAP1O43715 76 aa6.99□□□□□ -1.29
TRIM56-204ENST00000487252 SCGB1C2P0DMR2 95 aa6.99□□□□□ -1.29
TRIM56-204ENST00000487252 RNF151Q2KHN1 245 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms