RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 PSMB2P49721 201 aa4.05□□□□□ -1.76
VAMP3-203ENST00000487194 UBE2V1Q13404 147 aa4.05□□□□□ -1.76
VAMP3-203ENST00000487194 CASC10Q5T4H9 136 aa4.05□□□□□ -1.76
VAMP3-203ENST00000487194 CARD19Q96LW7 228 aa4.05□□□□□ -1.76
VAMP3-203ENST00000487194 TENM2Q9NT68 2774 aa4.05□□□□□ -1.76
VAMP3-203ENST00000487194 TRBV20-1A0A075B6N2 111 aa4.04□□□□□ -1.76
VAMP3-203ENST00000487194 H7C2G1 150 aa4.04□□□□□ -1.76
VAMP3-203ENST00000487194 K7EP34 96 aa4.04□□□□□ -1.76
VAMP3-203ENST00000487194 TLX1NBP0CAT3 122 aa4.04□□□□□ -1.76
VAMP3-203ENST00000487194 SCGB1C2P0DMR2 95 aa4.04□□□□□ -1.76
VAMP3-203ENST00000487194 NAA38Q9BRA0 125 aaKnown RBP4.04□□□□□ -1.76
VAMP3-203ENST00000487194 PKIGQ9Y2B9 76 aa4.04□□□□□ -1.76
VAMP3-203ENST00000487194 SPCS1Q9Y6A9 102 aa4.04□□□□□ -1.76
VAMP3-203ENST00000487194 EPPK1P58107 5090 aaKnown RBP4.03□□□□□ -1.76
VAMP3-203ENST00000487194 IGKV2-28A0A075B6P5 120 aa4.03□□□□□ -1.76
VAMP3-203ENST00000487194 TRBV10-2A0A0K0K1G8 114 aa4.03□□□□□ -1.76
VAMP3-203ENST00000487194 IGKV2D-28P01615 120 aa4.03□□□□□ -1.76
VAMP3-203ENST00000487194 CNBPP62633 177 aaKnown RBP4.03□□□□□ -1.76
VAMP3-203ENST00000487194 SACSQ9NZJ4 4579 aa4.02□□□□□ -1.77
VAMP3-203ENST00000487194 LOC107984640A0A0U1RRK4 108 aa4.02□□□□□ -1.77
VAMP3-203ENST00000487194 LECT2O14960 151 aa4.02□□□□□ -1.77
VAMP3-203ENST00000487194 LY6G6CO95867 125 aa4.02□□□□□ -1.77
VAMP3-203ENST00000487194 RPL28P46779 137 aaKnown RBP4.02□□□□□ -1.77
VAMP3-203ENST00000487194 Q6ZR54 194 aa4.02□□□□□ -1.77
VAMP3-203ENST00000487194 Q6ZRN7 208 aaPredicted RBP4.02□□□□□ -1.77
VAMP3-203ENST00000487194 LINC00337Q8N6G1 96 aa4.02□□□□□ -1.77
VAMP3-203ENST00000487194 OR13C6PQ8NH95 151 aa4.02□□□□□ -1.77
VAMP3-203ENST00000487194 LINC00476Q8WZB0 136 aa4.02□□□□□ -1.77
VAMP3-203ENST00000487194 TMEM126AQ9H061 195 aa4.02□□□□□ -1.77
VAMP3-203ENST00000487194 M0R2N4 97 aa4.01□□□□□ -1.77
VAMP3-203ENST00000487194 TRIAP1O43715 76 aa4.01□□□□□ -1.77
VAMP3-203ENST00000487194 SLPIP03973 132 aa4.01□□□□□ -1.77
VAMP3-203ENST00000487194 RPL18AQ02543 176 aaKnown RBP4.01□□□□□ -1.77
VAMP3-203ENST00000487194 ATXN8Q156A1 80 aa4.01□□□□□ -1.77
VAMP3-203ENST00000487194 GAGE2EQ4V326 116 aa4.01□□□□□ -1.77
VAMP3-203ENST00000487194 S100A7L2Q5SY68 101 aa4.01□□□□□ -1.77
VAMP3-203ENST00000487194 Q6ZRP5 223 aa4.01□□□□□ -1.77
VAMP3-203ENST00000487194 XAGE1AQ9HD64 81 aa4.01□□□□□ -1.77
VAMP3-203ENST00000487194 GAGE2DQ9UEU5 116 aa4.01□□□□□ -1.77
VAMP3-203ENST00000487194 PLA2G2DQ9UNK4 145 aa4.01□□□□□ -1.77
VAMP3-203ENST00000487194 CBY1Q9Y3M2 126 aa4.01□□□□□ -1.77
VAMP3-203ENST00000487194 DNAH11Q96DT5 4516 aa4□□□□□ -1.77
VAMP3-203ENST00000487194 LRCOL1A6NCL2 159 aa4□□□□□ -1.77
VAMP3-203ENST00000487194 WFDC2Q14508 124 aa4□□□□□ -1.77
VAMP3-203ENST00000487194 C1orf134Q5TEV5 83 aa4□□□□□ -1.77
VAMP3-203ENST00000487194 KMT2AQ03164 3969 aa3.99□□□□□ -1.77
VAMP3-203ENST00000487194 F8W1H4 67 aa3.99□□□□□ -1.77
VAMP3-203ENST00000487194 H0YGX0 51 aa3.99□□□□□ -1.77
VAMP3-203ENST00000487194 H3BMG7 143 aa3.99□□□□□ -1.77
VAMP3-203ENST00000487194 M0R378 163 aa3.99□□□□□ -1.77
VAMP3-203ENST00000487194 NCR3O14931 201 aa3.99□□□□□ -1.77
VAMP3-203ENST00000487194 TCL1BO95988 128 aa3.99□□□□□ -1.77
VAMP3-203ENST00000487194 IGLV6-57P01721 117 aa3.99□□□□□ -1.77
VAMP3-203ENST00000487194 VPREB1P12018 145 aa3.99□□□□□ -1.77
VAMP3-203ENST00000487194 PRR3P79522 188 aaKnown RBP3.99□□□□□ -1.77
VAMP3-203ENST00000487194 GAGE2BQ13066 116 aa3.99□□□□□ -1.77
VAMP3-203ENST00000487194 C9orf129Q5T035 196 aaKnown RBP3.99□□□□□ -1.77
VAMP3-203ENST00000487194 Q8N814 137 aa3.99□□□□□ -1.77
VAMP3-203ENST00000487194 SMIM11BQ8TCY0 68 aa3.99□□□□□ -1.77
VAMP3-203ENST00000487194 IGLV5-37A0A075B6J1 123 aa3.98□□□□□ -1.77
VAMP3-203ENST00000487194 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.98□□□□□ -1.77
VAMP3-203ENST00000487194 A0A087WTM6 91 aa3.98□□□□□ -1.77
VAMP3-203ENST00000487194 C16orf90A8MZG2 172 aa3.98□□□□□ -1.77
VAMP3-203ENST00000487194 LST1O00453 97 aa3.98□□□□□ -1.77
VAMP3-203ENST00000487194 C9orf163Q8N9P6 203 aa3.98□□□□□ -1.77
VAMP3-203ENST00000487194 NKAPP1Q8N9T2 125 aa3.98□□□□□ -1.77
VAMP3-203ENST00000487194 Q8NDZ9 215 aa3.98□□□□□ -1.77
VAMP3-203ENST00000487194 SNCGO76070 127 aa3.97□□□□□ -1.77
VAMP3-203ENST00000487194 LINC01620Q4KN68 170 aa3.97□□□□□ -1.77
VAMP3-203ENST00000487194 CLEC2BQ92478 149 aa3.97□□□□□ -1.77
VAMP3-203ENST00000487194 LINC00474Q9P2X8 69 aa3.97□□□□□ -1.77
VAMP3-203ENST00000487194 DNAH8Q96JB1 4490 aa3.96□□□□□ -1.77
VAMP3-203ENST00000487194 HYDINQ4G0P3 5121 aa3.96□□□□□ -1.78
VAMP3-203ENST00000487194 TRAV23DV6A0A075B6W5 121 aa3.96□□□□□ -1.78
VAMP3-203ENST00000487194 TRBV10-3A0A0K0K1G6 114 aa3.96□□□□□ -1.78
VAMP3-203ENST00000487194 A0A1B0GX51 115 aa3.96□□□□□ -1.78
VAMP3-203ENST00000487194 M0QXV9 152 aa3.96□□□□□ -1.78
VAMP3-203ENST00000487194 TRACP01848 142 aa3.96□□□□□ -1.78
VAMP3-203ENST00000487194 DNAH5Q8TE73 4624 aa3.96□□□□□ -1.78
VAMP3-203ENST00000487194 FAT2Q9NYQ8 4349 aa3.96□□□□□ -1.78
VAMP3-203ENST00000487194 TRBV7-6A0A0J9YX20 115 aa3.95□□□□□ -1.78
VAMP3-203ENST00000487194 C9JAW5 83 aa3.95□□□□□ -1.78
VAMP3-203ENST00000487194 SLC25A20O43772 301 aa3.95□□□□□ -1.78
VAMP3-203ENST00000487194 DNAL4O96015 105 aa3.95□□□□□ -1.78
VAMP3-203ENST00000487194 C6orf99Q4VX62 202 aa3.95□□□□□ -1.78
VAMP3-203ENST00000487194 SERTAD4-AS1Q5TG53 156 aa3.95□□□□□ -1.78
VAMP3-203ENST00000487194 C7orf33Q8WU49 177 aa3.95□□□□□ -1.78
VAMP3-203ENST00000487194 DIRC1Q969H9 104 aa3.95□□□□□ -1.78
VAMP3-203ENST00000487194 PRO0461Q9UI25 63 aa3.95□□□□□ -1.78
VAMP3-203ENST00000487194 A0A096LNI7 61 aa3.94□□□□□ -1.78
VAMP3-203ENST00000487194 IGKV2-24A0A0C4DH68 120 aa3.94□□□□□ -1.78
VAMP3-203ENST00000487194 H3BT86 120 aa3.94□□□□□ -1.78
VAMP3-203ENST00000487194 RTL8CO15255 209 aa3.94□□□□□ -1.78
VAMP3-203ENST00000487194 ZNF73O43830 326 aaPredicted RBP3.94□□□□□ -1.78
VAMP3-203ENST00000487194 SDIM1Q6ZPB5 146 aa3.94□□□□□ -1.78
VAMP3-203ENST00000487194 FAM19A5Q7Z5A7 132 aaPredicted RBP3.94□□□□□ -1.78
VAMP3-203ENST00000487194 MRPL55Q7Z7F7 128 aaKnown RBP3.94□□□□□ -1.78
VAMP3-203ENST00000487194 LINC01600Q96MT4 127 aa3.94□□□□□ -1.78
VAMP3-203ENST00000487194 KCNQ1DNQ9H478 68 aa3.94□□□□□ -1.78
VAMP3-203ENST00000487194 C22orf24Q9Y442 160 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms