RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 RPL13AP40429 203 aaKnown RBP8.64□□□□□ -1.03
CLDN11-207ENST00000486975 NDUFA6P56556 154 aa8.64□□□□□ -1.03
CLDN11-207ENST00000486975 YPEL4Q96NS1 127 aa8.64□□□□□ -1.03
CLDN11-207ENST00000486975 BCE1O60756 84 aa8.63□□□□□ -1.03
CLDN11-207ENST00000486975 PMCHL1Q16048 86 aa8.63□□□□□ -1.03
CLDN11-207ENST00000486975 LINC00167Q96N53 147 aa8.63□□□□□ -1.03
CLDN11-207ENST00000486975 RPL28P46779 137 aaKnown RBP8.62□□□□□ -1.03
CLDN11-207ENST00000486975 COX17Q14061 63 aa8.62□□□□□ -1.03
CLDN11-207ENST00000486975 SFTA2Q6UW10 78 aa8.62□□□□□ -1.03
CLDN11-207ENST00000486975 C11orf86A6NJI1 115 aa8.61□□□□□ -1.03
CLDN11-207ENST00000486975 BAGE3Q86Y29 109 aa8.61□□□□□ -1.03
CLDN11-207ENST00000486975 CBLN2Q8IUK8 224 aa8.61□□□□□ -1.03
CLDN11-207ENST00000486975 CHCHD1Q96BP2 118 aaKnown RBP8.61□□□□□ -1.03
CLDN11-207ENST00000486975 NKAPP1Q8N9T2 125 aa8.6□□□□□ -1.03
CLDN11-207ENST00000486975 ERG28Q9UKR5 140 aa8.6□□□□□ -1.03
CLDN11-207ENST00000486975 PFN2P35080 140 aa8.59□□□□□ -1.03
CLDN11-207ENST00000486975 TRAV12-1A0A0B4J245 112 aa8.58□□□□□ -1.04
CLDN11-207ENST00000486975 GAGE10A6NGK3 116 aa8.58□□□□□ -1.04
CLDN11-207ENST00000486975 RPL37AP8A6NKH3 93 aa8.58□□□□□ -1.04
CLDN11-207ENST00000486975 TMEM170BQ5T4T1 132 aa8.58□□□□□ -1.04
CLDN11-207ENST00000486975 ZNF625Q96I27 306 aaPredicted RBP8.58□□□□□ -1.04
CLDN11-207ENST00000486975 SND1-IT1Q9HBX3 110 aa8.58□□□□□ -1.04
CLDN11-207ENST00000486975 CHTOPQ9Y3Y2 248 aaKnown RBP8.58□□□□□ -1.04
CLDN11-207ENST00000486975 VPREB1P12018 145 aa8.57□□□□□ -1.04
CLDN11-207ENST00000486975 KRTAP13-1Q8IUC0 172 aa8.57□□□□□ -1.04
CLDN11-207ENST00000486975 RPL24P83731 157 aaKnown RBP8.56□□□□□ -1.04
CLDN11-207ENST00000486975 IFI27L1Q96BM0 104 aa8.56□□□□□ -1.04
CLDN11-207ENST00000486975 TMEM223A0PJW6 202 aa8.54□□□□□ -1.04
CLDN11-207ENST00000486975 IGKV2-28A0A075B6P5 120 aa8.53□□□□□ -1.04
CLDN11-207ENST00000486975 IGKV2D-28P01615 120 aa8.53□□□□□ -1.04
CLDN11-207ENST00000486975 UBE2AP49459 152 aa8.53□□□□□ -1.04
CLDN11-207ENST00000486975 A0A087X002 238 aa8.52□□□□□ -1.05
CLDN11-207ENST00000486975 HSBP1O75506 76 aa8.52□□□□□ -1.05
CLDN11-207ENST00000486975 SCO1O75880 301 aa8.52□□□□□ -1.05
CLDN11-207ENST00000486975 TRGC2P03986 189 aa8.52□□□□□ -1.05
CLDN11-207ENST00000486975 CRYGAP11844 174 aa8.52□□□□□ -1.05
CLDN11-207ENST00000486975 Q8NDZ9 215 aa8.51□□□□□ -1.05
CLDN11-207ENST00000486975 TMEM126AQ9H061 195 aa8.51□□□□□ -1.05
CLDN11-207ENST00000486975 COLCA2A8K830 154 aa8.5□□□□□ -1.05
CLDN11-207ENST00000486975 FAM229BQ4G0N7 80 aa8.5□□□□□ -1.05
CLDN11-207ENST00000486975 LINC00158P58513 81 aa8.49□□□□□ -1.05
CLDN11-207ENST00000486975 FAM19A2Q8N3H0 131 aa8.49□□□□□ -1.05
CLDN11-207ENST00000486975 RNF213Q63HN8 5207 aa8.49□□□□□ -1.05
CLDN11-207ENST00000486975 TMEM238C9JI98 176 aa8.48□□□□□ -1.05
CLDN11-207ENST00000486975 M0R378 163 aa8.48□□□□□ -1.05
CLDN11-207ENST00000486975 HERV-K104P63124 156 aa8.48□□□□□ -1.05
CLDN11-207ENST00000486975 TYMSOSQ8TAI1 123 aa8.48□□□□□ -1.05
CLDN11-207ENST00000486975 PRLHP81277 87 aa8.47□□□□□ -1.05
CLDN11-207ENST00000486975 FAM19A1Q7Z5A9 133 aa8.47□□□□□ -1.05
CLDN11-207ENST00000486975 LINC00587B1AMM8 73 aa8.46□□□□□ -1.06
CLDN11-207ENST00000486975 LEPROTL1O95214 131 aa8.46□□□□□ -1.06
CLDN11-207ENST00000486975 KRTAP13-2Q52LG2 175 aa8.46□□□□□ -1.06
CLDN11-207ENST00000486975 SERF1AO75920 110 aa8.45□□□□□ -1.06
CLDN11-207ENST00000486975 SMIM13P0DJ93 91 aa8.45□□□□□ -1.06
CLDN11-207ENST00000486975 ANAPC11Q9NYG5 84 aa8.45□□□□□ -1.06
CLDN11-207ENST00000486975 LPAP08519 4548 aa8.44□□□□□ -1.06
CLDN11-207ENST00000486975 A0A0U1RRA0 63 aa8.44□□□□□ -1.06
CLDN11-207ENST00000486975 ATP6V1G1O75348 118 aa8.44□□□□□ -1.06
CLDN11-207ENST00000486975 PRR4Q16378 134 aa8.44□□□□□ -1.06
CLDN11-207ENST00000486975 MEIG1Q5JSS6 88 aa8.44□□□□□ -1.06
CLDN11-207ENST00000486975 NDUFA12Q9UI09 145 aa8.44□□□□□ -1.06
CLDN11-207ENST00000486975 IGKV2D-26A0A0A0MRZ7 120 aa8.43□□□□□ -1.06
CLDN11-207ENST00000486975 MYMXA0A1B0GTQ4 84 aa8.43□□□□□ -1.06
CLDN11-207ENST00000486975 PLNP26678 52 aa8.43□□□□□ -1.06
CLDN11-207ENST00000486975 MIR7-3HGQ8N6C7 128 aa8.43□□□□□ -1.06
CLDN11-207ENST00000486975 PLEKHB2Q96CS7 222 aa8.43□□□□□ -1.06
CLDN11-207ENST00000486975 TSPAN13O95857 204 aa8.42□□□□□ -1.06
CLDN11-207ENST00000486975 CTAG1AP78358 180 aa8.42□□□□□ -1.06
CLDN11-207ENST00000486975 BOD1L2Q8IYS8 172 aa8.42□□□□□ -1.06
CLDN11-207ENST00000486975 MAP1LC3CQ9BXW4 147 aa8.42□□□□□ -1.06
CLDN11-207ENST00000486975 HSPB8Q9UJY1 196 aa8.42□□□□□ -1.06
CLDN11-207ENST00000486975 H0Y8G0 127 aa8.41□□□□□ -1.06
CLDN11-207ENST00000486975 PRYO14603 147 aa8.41□□□□□ -1.06
CLDN11-207ENST00000486975 KRTAP3-1Q9BYR8 98 aa8.41□□□□□ -1.06
CLDN11-207ENST00000486975 LOC107984156A0A0G2JMH3 177 aa8.4□□□□□ -1.06
CLDN11-207ENST00000486975 LEPROTO15243 131 aa8.4□□□□□ -1.06
CLDN11-207ENST00000486975 SPRR1AP35321 89 aa8.4□□□□□ -1.06
CLDN11-207ENST00000486975 TSPEAR-AS2P59090 65 aa8.4□□□□□ -1.06
CLDN11-207ENST00000486975 ARL17AQ8IVW1 177 aa8.4□□□□□ -1.06
CLDN11-207ENST00000486975 DPM2O94777 84 aa8.39□□□□□ -1.07
CLDN11-207ENST00000486975 LINC00337Q8N6G1 96 aa8.39□□□□□ -1.07
CLDN11-207ENST00000486975 LINC00304Q8N9R0 145 aa8.39□□□□□ -1.07
CLDN11-207ENST00000486975 HIGD2AQ9BW72 106 aa8.39□□□□□ -1.07
CLDN11-207ENST00000486975 KCNQ1DNQ9H478 68 aa8.39□□□□□ -1.07
CLDN11-207ENST00000486975 J3QQQ9 107 aa8.38□□□□□ -1.07
CLDN11-207ENST00000486975 NMUP48645 174 aa8.38□□□□□ -1.07
CLDN11-207ENST00000486975 HERVK_113P61574 105 aa8.38□□□□□ -1.07
CLDN11-207ENST00000486975 KRTAP4-16G5E9R7 235 aaPredicted RBP8.37□□□□□ -1.07
CLDN11-207ENST00000486975 HIST1H2BKO60814 126 aa8.37□□□□□ -1.07
CLDN11-207ENST00000486975 HIST1H2BJP06899 126 aa8.37□□□□□ -1.07
CLDN11-207ENST00000486975 FABP4P15090 132 aa8.37□□□□□ -1.07
CLDN11-207ENST00000486975 HIST1H2BOP23527 126 aa8.37□□□□□ -1.07
CLDN11-207ENST00000486975 HIST1H2BBP33778 126 aa8.37□□□□□ -1.07
CLDN11-207ENST00000486975 HIST1H2BDP58876 126 aa8.37□□□□□ -1.07
CLDN11-207ENST00000486975 HIST1H2BCP62807 126 aa8.37□□□□□ -1.07
CLDN11-207ENST00000486975 HIST2H2BEQ16778 126 aa8.37□□□□□ -1.07
CLDN11-207ENST00000486975 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.37□□□□□ -1.07
CLDN11-207ENST00000486975 HIST1H2BHQ93079 126 aa8.37□□□□□ -1.07
CLDN11-207ENST00000486975 SPRR4Q96PI1 79 aa8.37□□□□□ -1.07
CLDN11-207ENST00000486975 HIST1H2BNQ99877 126 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms