RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 TRBV6-8A0A0A6YYG3 113 aa6.25□□□□□ -1.41
COL12A1-208ENST00000486533 TRAV10A0A0B4J240 114 aa6.25□□□□□ -1.41
COL12A1-208ENST00000486533 SMIM9A6NGZ8 99 aa6.25□□□□□ -1.41
COL12A1-208ENST00000486533 ATP5G1P05496 136 aa6.25□□□□□ -1.41
COL12A1-208ENST00000486533 SS18Q15532 418 aa6.25□□□□□ -1.41
COL12A1-208ENST00000486533 LCE4AQ5TA78 99 aa6.25□□□□□ -1.41
COL12A1-208ENST00000486533 TRBV7-7A0A0K0K1E9 115 aa6.24□□□□□ -1.41
COL12A1-208ENST00000486533 SND1-IT1Q9HBX3 110 aa6.24□□□□□ -1.41
COL12A1-208ENST00000486533 CELA1Q9UNI1 258 aa6.24□□□□□ -1.41
COL12A1-208ENST00000486533 A0A087WZ39 114 aa6.23□□□□□ -1.41
COL12A1-208ENST00000486533 CXCL5P42830 114 aa6.23□□□□□ -1.41
COL12A1-208ENST00000486533 LINC00158P58513 81 aa6.23□□□□□ -1.41
COL12A1-208ENST00000486533 LINC00643Q86TS7 51 aa6.23□□□□□ -1.41
COL12A1-208ENST00000486533 DEFB131BA0A096LNP1 70 aa6.23□□□□□ -1.41
COL12A1-208ENST00000486533 BAALC-AS2P0C853 105 aa6.23□□□□□ -1.41
COL12A1-208ENST00000486533 TOMM7Q9P0U1 55 aa6.23□□□□□ -1.41
COL12A1-208ENST00000486533 APLNQ9ULZ1 77 aa6.23□□□□□ -1.41
COL12A1-208ENST00000486533 A0A0U1RRA0 63 aa6.22□□□□□ -1.41
COL12A1-208ENST00000486533 A0A1B0GX51 115 aa6.22□□□□□ -1.41
COL12A1-208ENST00000486533 PLAC8L1A1L4L8 177 aa6.22□□□□□ -1.41
COL12A1-208ENST00000486533 FHL2Q14192 279 aa6.22□□□□□ -1.41
COL12A1-208ENST00000486533 SOSTDC1Q6X4U4 206 aa6.22□□□□□ -1.41
COL12A1-208ENST00000486533 MIR7-3HGQ8N6C7 128 aa6.22□□□□□ -1.41
COL12A1-208ENST00000486533 KRTAP4-9Q9BYQ8 210 aa6.22□□□□□ -1.41
COL12A1-208ENST00000486533 A0A1B0GUV1 79 aa6.21□□□□□ -1.42
COL12A1-208ENST00000486533 SPART-AS1P0CW21 52 aa6.21□□□□□ -1.42
COL12A1-208ENST00000486533 MALP21145 153 aa6.21□□□□□ -1.42
COL12A1-208ENST00000486533 IGHV3OR16-9A0A0B4J2B5 98 aa6.2□□□□□ -1.42
COL12A1-208ENST00000486533 LYRM9A8MSI8 78 aa6.2□□□□□ -1.42
COL12A1-208ENST00000486533 KRTAP19-4Q3LI73 84 aa6.2□□□□□ -1.42
COL12A1-208ENST00000486533 C6orf226Q5I0X4 101 aa6.2□□□□□ -1.42
COL12A1-208ENST00000486533 Q8IZM0 81 aa6.2□□□□□ -1.42
COL12A1-208ENST00000486533 LINC00612Q8N6U2 182 aa6.2□□□□□ -1.42
COL12A1-208ENST00000486533 COX17Q14061 63 aa6.19□□□□□ -1.42
COL12A1-208ENST00000486533 PRO0255Q9UI72 69 aa6.19□□□□□ -1.42
COL12A1-208ENST00000486533 LINC00959A0A1B0GUT2 108 aa6.18□□□□□ -1.42
COL12A1-208ENST00000486533 HTN3P15516 51 aa6.18□□□□□ -1.42
COL12A1-208ENST00000486533 S100A7L2Q5SY68 101 aa6.18□□□□□ -1.42
COL12A1-208ENST00000486533 CFAP161Q6P656 301 aa6.18□□□□□ -1.42
COL12A1-208ENST00000486533 H3BS24 57 aa6.18□□□□□ -1.42
COL12A1-208ENST00000486533 GYPEP15421 78 aa6.18□□□□□ -1.42
COL12A1-208ENST00000486533 VPS13DQ5THJ4 4388 aa6.17□□□□□ -1.42
COL12A1-208ENST00000486533 IGKV3OR2-268A0A0C4DH90 116 aa6.17□□□□□ -1.42
COL12A1-208ENST00000486533 LOC100131303A0A0U1RQF7 123 aa6.17□□□□□ -1.42
COL12A1-208ENST00000486533 H3BQ85 93 aa6.17□□□□□ -1.42
COL12A1-208ENST00000486533 NDUFC2O95298 119 aa6.17□□□□□ -1.42
COL12A1-208ENST00000486533 CCL18P55774 89 aa6.17□□□□□ -1.42
COL12A1-208ENST00000486533 LINC00337Q8N6G1 96 aa6.17□□□□□ -1.42
COL12A1-208ENST00000486533 TMEM126AQ9H061 195 aa6.17□□□□□ -1.42
COL12A1-208ENST00000486533 IGLV4-60A0A075B6I1 120 aa6.16□□□□□ -1.42
COL12A1-208ENST00000486533 DEFB130BP0DP73 79 aa6.16□□□□□ -1.42
COL12A1-208ENST00000486533 DEFB130AP0DP74 79 aa6.16□□□□□ -1.42
COL12A1-208ENST00000486533 DAD1P61803 113 aa6.16□□□□□ -1.42
COL12A1-208ENST00000486533 GAGE2AQ6NT46 116 aa6.16□□□□□ -1.42
COL12A1-208ENST00000486533 SDIM1Q6ZPB5 146 aa6.16□□□□□ -1.42
COL12A1-208ENST00000486533 OR13C6PQ8NH95 151 aa6.16□□□□□ -1.42
COL12A1-208ENST00000486533 SMIM11BQ8TCY0 68 aa6.16□□□□□ -1.42
COL12A1-208ENST00000486533 ORMDL1Q9P0S3 153 aa6.16□□□□□ -1.42
COL12A1-208ENST00000486533 IGKV2-28A0A075B6P5 120 aa6.15□□□□□ -1.42
COL12A1-208ENST00000486533 JMJD7-PLA2G4BH0Y9G9 81 aa6.15□□□□□ -1.42
COL12A1-208ENST00000486533 IGKV2D-28P01615 120 aa6.15□□□□□ -1.42
COL12A1-208ENST00000486533 C5orf38Q86SI9 138 aa6.15□□□□□ -1.42
COL12A1-208ENST00000486533 UBE2DNLQ8IWF7 75 aa6.15□□□□□ -1.42
COL12A1-208ENST00000486533 DNAH10Q8IVF4 4471 aa6.15□□□□□ -1.43
COL12A1-208ENST00000486533 M0R2N4 97 aa6.14□□□□□ -1.43
COL12A1-208ENST00000486533 PFN2P35080 140 aa6.14□□□□□ -1.43
COL12A1-208ENST00000486533 CD164L2Q6UWJ8 174 aa6.14□□□□□ -1.43
COL12A1-208ENST00000486533 HECTD4Q9Y4D8 3996 aa6.14□□□□□ -1.43
COL12A1-208ENST00000486533 B5MCH6 92 aa6.14□□□□□ -1.43
COL12A1-208ENST00000486533 ATOX1O00244 68 aa6.14□□□□□ -1.43
COL12A1-208ENST00000486533 ATP5EP2Q5VTU8 51 aa6.14□□□□□ -1.43
COL12A1-208ENST00000486533 FAM236AA0A1B0GUQ0 79 aa6.13□□□□□ -1.43
COL12A1-208ENST00000486533 FAM236BA0A1B0GV22 79 aa6.13□□□□□ -1.43
COL12A1-208ENST00000486533 XCL1P47992 114 aa6.13□□□□□ -1.43
COL12A1-208ENST00000486533 Q6JHZ5 121 aa6.13□□□□□ -1.43
COL12A1-208ENST00000486533 FAM218AQ96MZ4 157 aa6.13□□□□□ -1.43
COL12A1-208ENST00000486533 TMEM256-PLSCR3K7ERE1 68 aa6.12□□□□□ -1.43
COL12A1-208ENST00000486533 UQCRQO14949 82 aa6.12□□□□□ -1.43
COL12A1-208ENST00000486533 LECT2O14960 151 aa6.12□□□□□ -1.43
COL12A1-208ENST00000486533 LINC00336Q6ZUF6 198 aa6.12□□□□□ -1.43
COL12A1-208ENST00000486533 OBSCN-AS1Q96MR7 158 aa6.12□□□□□ -1.43
COL12A1-208ENST00000486533 LINC00167Q96N53 147 aa6.11□□□□□ -1.43
COL12A1-208ENST00000486533 Q9HAA7 133 aa6.11□□□□□ -1.43
COL12A1-208ENST00000486533 A0A087WYN8 130 aa6.1□□□□□ -1.43
COL12A1-208ENST00000486533 KRTAP9-7A8MTY7 169 aa6.1□□□□□ -1.43
COL12A1-208ENST00000486533 CCDC179H3BU77 68 aa6.1□□□□□ -1.43
COL12A1-208ENST00000486533 DNAH6Q9C0G6 4158 aa6.1□□□□□ -1.43
COL12A1-208ENST00000486533 REG3AQ06141 175 aa6.1□□□□□ -1.43
COL12A1-208ENST00000486533 C3orf22Q8N5N4 141 aa6.1□□□□□ -1.43
COL12A1-208ENST00000486533 CHCHD10Q8WYQ3 142 aaPredicted RBP6.1□□□□□ -1.43
COL12A1-208ENST00000486533 SS18L2Q9UHA2 77 aa6.1□□□□□ -1.43
COL12A1-208ENST00000486533 DNAH2Q9P225 4427 aa6.09□□□□□ -1.43
COL12A1-208ENST00000486533 RTL8CO15255 209 aa6.09□□□□□ -1.43
COL12A1-208ENST00000486533 ANGP03950 147 aaKnown RBP6.09□□□□□ -1.43
COL12A1-208ENST00000486533 C9orf153Q5TBE3 101 aa6.09□□□□□ -1.43
COL12A1-208ENST00000486533 KIAA1109Q2LD37 5005 aa6.08□□□□□ -1.44
COL12A1-208ENST00000486533 CCKP06307 115 aa6.08□□□□□ -1.44
COL12A1-208ENST00000486533 LELP1Q5T871 98 aa6.08□□□□□ -1.44
COL12A1-208ENST00000486533 LINC00269Q8N2A0 174 aa6.08□□□□□ -1.44
COL12A1-208ENST00000486533 KRTAP4-2Q9BYR5 136 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms