RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 SMCR5Q8TEV8 140 aa2.71□□□□□ -1.98
PRPF38B-205ENST00000485810 TMEM263Q8WUH6 116 aaKnown RBP2.71□□□□□ -1.98
PRPF38B-205ENST00000485810 LITAFQ99732 161 aa2.71□□□□□ -1.98
PRPF38B-205ENST00000485810 TIMM21Q9BVV7 248 aa2.71□□□□□ -1.98
PRPF38B-205ENST00000485810 ZZEF1O43149 2961 aa2.71□□□□□ -1.98
PRPF38B-205ENST00000485810 AKAP6Q13023 2319 aa2.71□□□□□ -1.98
PRPF38B-205ENST00000485810 IGLV7-46A0A075B6I9 117 aa2.7□□□□□ -1.98
PRPF38B-205ENST00000485810 TRAV13-2A0A0B4J235 113 aa2.7□□□□□ -1.98
PRPF38B-205ENST00000485810 SMIM29Q86T20 159 aa2.7□□□□□ -1.98
PRPF38B-205ENST00000485810 NDUFA12Q9UI09 145 aa2.7□□□□□ -1.98
PRPF38B-205ENST00000485810 CREBBPQ92793 2442 aa2.7□□□□□ -1.98
PRPF38B-205ENST00000485810 IGHV3-73A0A0B4J1V6 119 aa2.69□□□□□ -1.98
PRPF38B-205ENST00000485810 A8MWP4 228 aa2.69□□□□□ -1.98
PRPF38B-205ENST00000485810 H3BMM0 161 aa2.69□□□□□ -1.98
PRPF38B-205ENST00000485810 LECT2O14960 151 aa2.69□□□□□ -1.98
PRPF38B-205ENST00000485810 IGHV3-53P01767 116 aa2.69□□□□□ -1.98
PRPF38B-205ENST00000485810 RPL28P46779 137 aaKnown RBP2.69□□□□□ -1.98
PRPF38B-205ENST00000485810 ZNF56Q15929 161 aa2.69□□□□□ -1.98
PRPF38B-205ENST00000485810 DEFB112Q30KQ8 113 aa2.69□□□□□ -1.98
PRPF38B-205ENST00000485810 DEFB121Q5J5C9 76 aa2.69□□□□□ -1.98
PRPF38B-205ENST00000485810 MUSTN1Q8IVN3 82 aa2.69□□□□□ -1.98
PRPF38B-205ENST00000485810 CYP4F30PQ9H0H9 118 aa2.69□□□□□ -1.98
PRPF38B-205ENST00000485810 UBE2D4Q9Y2X8 147 aa2.69□□□□□ -1.98
PRPF38B-205ENST00000485810 ATMQ13315 3056 aa2.69□□□□□ -1.98
PRPF38B-205ENST00000485810 DOPEY2Q9Y3R5 2298 aa2.68□□□□□ -1.98
PRPF38B-205ENST00000485810 DMXL2Q8TDJ6 3036 aa2.68□□□□□ -1.98
PRPF38B-205ENST00000485810 OBSCNQ5VST9 7968 aa2.68□□□□□ -1.98
PRPF38B-205ENST00000485810 IGKV3-7A0A075B6H7 116 aa2.68□□□□□ -1.98
PRPF38B-205ENST00000485810 TRBV10-2A0A0K0K1G8 114 aa2.68□□□□□ -1.98
PRPF38B-205ENST00000485810 A0A1B0GVX0 72 aa2.68□□□□□ -1.98
PRPF38B-205ENST00000485810 INSP01308 110 aa2.68□□□□□ -1.98
PRPF38B-205ENST00000485810 XCL1P47992 114 aa2.68□□□□□ -1.98
PRPF38B-205ENST00000485810 LINC01547P58512 204 aaPredicted RBP2.68□□□□□ -1.98
PRPF38B-205ENST00000485810 ATXN8Q156A1 80 aa2.68□□□□□ -1.98
PRPF38B-205ENST00000485810 SPINK13Q1W4C9 94 aa2.68□□□□□ -1.98
PRPF38B-205ENST00000485810 FAM74A4Q5TZK3 123 aa2.68□□□□□ -1.98
PRPF38B-205ENST00000485810 CSPG4Q6UVK1 2322 aa2.68□□□□□ -1.98
PRPF38B-205ENST00000485810 SDIM1Q6ZPB5 146 aa2.68□□□□□ -1.98
PRPF38B-205ENST00000485810 LINC00474Q9P2X8 69 aa2.68□□□□□ -1.98
PRPF38B-205ENST00000485810 SPG11Q96JI7 2443 aa2.67□□□□□ -1.98
PRPF38B-205ENST00000485810 TRBV10-1A0A0K0K1A3 114 aa2.67□□□□□ -1.98
PRPF38B-205ENST00000485810 TRBV10-3A0A0K0K1G6 114 aa2.67□□□□□ -1.98
PRPF38B-205ENST00000485810 NDUFA1O15239 70 aa2.67□□□□□ -1.98
PRPF38B-205ENST00000485810 C10orf99Q6UWK7 81 aa2.67□□□□□ -1.98
PRPF38B-205ENST00000485810 CASC2Q6XLA1 102 aa2.67□□□□□ -1.98
PRPF38B-205ENST00000485810 Q8N814 137 aa2.67□□□□□ -1.98
PRPF38B-205ENST00000485810 C4orf3Q8WVX3 66 aa2.67□□□□□ -1.98
PRPF38B-205ENST00000485810 UBE2WQ96B02 151 aa2.67□□□□□ -1.98
PRPF38B-205ENST00000485810 PRRC2AP48634 2157 aaKnown RBP2.67□□□□□ -1.98
PRPF38B-205ENST00000485810 NCOR2Q9Y618 2525 aa2.66□□□□□ -1.98
PRPF38B-205ENST00000485810 CHD8Q9HCK8 2581 aa2.66□□□□□ -1.98
PRPF38B-205ENST00000485810 KALRNO60229 2985 aa2.66□□□□□ -1.98
PRPF38B-205ENST00000485810 H7C423 109 aa2.66□□□□□ -1.98
PRPF38B-205ENST00000485810 CRPP02741 224 aa2.66□□□□□ -1.98
PRPF38B-205ENST00000485810 COX6CP09669 75 aa2.66□□□□□ -1.98
PRPF38B-205ENST00000485810 DEFB131AP59861 70 aa2.66□□□□□ -1.98
PRPF38B-205ENST00000485810 KLKP1Q107X0 134 aa2.66□□□□□ -1.98
PRPF38B-205ENST00000485810 DEFB114Q30KQ6 69 aa2.66□□□□□ -1.98
PRPF38B-205ENST00000485810 SPTSSBQ8NFR3 76 aa2.66□□□□□ -1.98
PRPF38B-205ENST00000485810 C14orf132Q9NPU4 83 aa2.66□□□□□ -1.98
PRPF38B-205ENST00000485810 ICOSQ9Y6W8 199 aa2.66□□□□□ -1.98
PRPF38B-205ENST00000485810 DCHS2Q6V1P9 2916 aa2.66□□□□□ -1.98
PRPF38B-205ENST00000485810 SETXQ7Z333 2677 aaKnown RBP2.66□□□□□ -1.98
PRPF38B-205ENST00000485810 RELNP78509 3460 aa2.65□□□□□ -1.98
PRPF38B-205ENST00000485810 TRAV7A0A075B6U4 112 aa2.65□□□□□ -1.98
PRPF38B-205ENST00000485810 H7BZZ5 65 aa2.65□□□□□ -1.98
PRPF38B-205ENST00000485810 IGLV1-51P01701 117 aa2.65□□□□□ -1.98
PRPF38B-205ENST00000485810 SYCNQ0VAF6 134 aa2.65□□□□□ -1.98
PRPF38B-205ENST00000485810 C9orf116Q5BN46 136 aaPredicted RBP2.65□□□□□ -1.98
PRPF38B-205ENST00000485810 ADM2Q7Z4H4 148 aa2.65□□□□□ -1.98
PRPF38B-205ENST00000485810 LINC01006Q8NI28 216 aa2.65□□□□□ -1.98
PRPF38B-205ENST00000485810 TACC2O95359 2948 aa2.65□□□□□ -1.98
PRPF38B-205ENST00000485810 NACAE9PAV3 2078 aa2.65□□□□□ -1.99
PRPF38B-205ENST00000485810 USP9YO00507 2555 aaPredicted RBP2.65□□□□□ -1.99
PRPF38B-205ENST00000485810 SPTBN4Q9H254 2564 aa2.65□□□□□ -1.99
PRPF38B-205ENST00000485810 SVEP1Q4LDE5 3571 aa2.65□□□□□ -1.99
PRPF38B-205ENST00000485810 USP9XQ93008 2570 aaPredicted RBP2.64□□□□□ -1.99
PRPF38B-205ENST00000485810 TLX1NBP0CAT3 122 aa2.64□□□□□ -1.99
PRPF38B-205ENST00000485810 Q8NDZ9 215 aa2.64□□□□□ -1.99
PRPF38B-205ENST00000485810 CIRBP-AS1Q8TBR5 109 aa2.64□□□□□ -1.99
PRPF38B-205ENST00000485810 LINC00308Q8TCZ7 52 aa2.64□□□□□ -1.99
PRPF38B-205ENST00000485810 CYSTM1Q9H1C7 97 aa2.64□□□□□ -1.99
PRPF38B-205ENST00000485810 CDKN2A-AS1Q9UH64 79 aa2.64□□□□□ -1.99
PRPF38B-205ENST00000485810 ACACBO00763 2458 aa2.64□□□□□ -1.99
PRPF38B-205ENST00000485810 SORL1Q92673 2214 aa2.64□□□□□ -1.99
PRPF38B-205ENST00000485810 PIEZO1Q92508 2521 aa2.64□□□□□ -1.99
PRPF38B-205ENST00000485810 DCHS1Q96JQ0 3298 aa2.64□□□□□ -1.99
PRPF38B-205ENST00000485810 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.63□□□□□ -1.99
PRPF38B-205ENST00000485810 IGHV3-64A0A075B6Q5 118 aa2.63□□□□□ -1.99
PRPF38B-205ENST00000485810 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.63□□□□□ -1.99
PRPF38B-205ENST00000485810 IGKV2-29A2NJV5 120 aaPredicted RBP2.63□□□□□ -1.99
PRPF38B-205ENST00000485810 HCG22E2RYF7 251 aa2.63□□□□□ -1.99
PRPF38B-205ENST00000485810 H3BPC8 53 aa2.63□□□□□ -1.99
PRPF38B-205ENST00000485810 H7C2G1 150 aa2.63□□□□□ -1.99
PRPF38B-205ENST00000485810 ROMO1P60602 79 aa2.63□□□□□ -1.99
PRPF38B-205ENST00000485810 Q1RN00 199 aa2.63□□□□□ -1.99
PRPF38B-205ENST00000485810 C1orf134Q5TEV5 83 aa2.63□□□□□ -1.99
PRPF38B-205ENST00000485810 SFTA2Q6UW10 78 aa2.63□□□□□ -1.99
PRPF38B-205ENST00000485810 C2orf82Q6UX34 121 aa2.63□□□□□ -1.99
PRPF38B-205ENST00000485810 NTM-AS1Q6ZSK4 140 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms