RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 DOPEY1Q5JWR5 2465 aa3.16□□□□□ -1.9
SMARCC1-206ENST00000485737 SMIM26A0A096LP01 95 aa3.15□□□□□ -1.91
SMARCC1-206ENST00000485737 LYRM9A8MSI8 78 aa3.15□□□□□ -1.91
SMARCC1-206ENST00000485737 KRTAP10-11P60412 298 aa3.15□□□□□ -1.91
SMARCC1-206ENST00000485737 REG3AQ06141 175 aa3.15□□□□□ -1.91
SMARCC1-206ENST00000485737 SPAG11BQ08648 103 aa3.15□□□□□ -1.91
SMARCC1-206ENST00000485737 CR1P17927 2039 aa3.14□□□□□ -1.91
SMARCC1-206ENST00000485737 TRAV10A0A0B4J240 114 aa3.14□□□□□ -1.91
SMARCC1-206ENST00000485737 M0R2N4 97 aa3.14□□□□□ -1.91
SMARCC1-206ENST00000485737 ELOF1P60002 83 aaKnown RBP3.14□□□□□ -1.91
SMARCC1-206ENST00000485737 CLPSL2Q6UWE3 100 aa3.14□□□□□ -1.91
SMARCC1-206ENST00000485737 Q6ZQY7 126 aa3.14□□□□□ -1.91
SMARCC1-206ENST00000485737 LINC00269Q8N2A0 174 aa3.14□□□□□ -1.91
SMARCC1-206ENST00000485737 ZNF843Q8N446 348 aa3.14□□□□□ -1.91
SMARCC1-206ENST00000485737 SPATA3Q8NHX4 192 aa3.14□□□□□ -1.91
SMARCC1-206ENST00000485737 DIRC1Q969H9 104 aa3.14□□□□□ -1.91
SMARCC1-206ENST00000485737 ESM1Q9NQ30 184 aa3.14□□□□□ -1.91
SMARCC1-206ENST00000485737 LAMTOR3Q9UHA4 124 aa3.14□□□□□ -1.91
SMARCC1-206ENST00000485737 PRO0628Q9UI54 55 aa3.14□□□□□ -1.91
SMARCC1-206ENST00000485737 ITPR1Q14643 2758 aa3.14□□□□□ -1.91
SMARCC1-206ENST00000485737 ZFHX3Q15911 3703 aa3.14□□□□□ -1.91
SMARCC1-206ENST00000485737 DEFB130BP0DP73 79 aa3.13□□□□□ -1.91
SMARCC1-206ENST00000485737 DEFB130AP0DP74 79 aa3.13□□□□□ -1.91
SMARCC1-206ENST00000485737 MIFP14174 115 aa3.13□□□□□ -1.91
SMARCC1-206ENST00000485737 COX7BP24311 80 aa3.13□□□□□ -1.91
SMARCC1-206ENST00000485737 NREPQ16612 68 aa3.13□□□□□ -1.91
SMARCC1-206ENST00000485737 C9orf116Q5BN46 136 aaPredicted RBP3.13□□□□□ -1.91
SMARCC1-206ENST00000485737 C10orf25Q5T742 122 aa3.13□□□□□ -1.91
SMARCC1-206ENST00000485737 FP248Q71RG6 208 aaPredicted RBP3.13□□□□□ -1.91
SMARCC1-206ENST00000485737 LINC01006Q8NI28 216 aa3.13□□□□□ -1.91
SMARCC1-206ENST00000485737 PRR34Q9NV39 138 aa3.13□□□□□ -1.91
SMARCC1-206ENST00000485737 CELA1Q9UNI1 258 aa3.13□□□□□ -1.91
SMARCC1-206ENST00000485737 NBASA2RRP1 2371 aa3.12□□□□□ -1.91
SMARCC1-206ENST00000485737 CYSRT1A8MQ03 144 aa3.12□□□□□ -1.91
SMARCC1-206ENST00000485737 F8WEM9 126 aa3.12□□□□□ -1.91
SMARCC1-206ENST00000485737 ZNF73O43830 326 aaPredicted RBP3.12□□□□□ -1.91
SMARCC1-206ENST00000485737 ANGP03950 147 aaKnown RBP3.12□□□□□ -1.91
SMARCC1-206ENST00000485737 HAMPP81172 84 aa3.12□□□□□ -1.91
SMARCC1-206ENST00000485737 LELP1Q5T871 98 aa3.12□□□□□ -1.91
SMARCC1-206ENST00000485737 UNQ6190/PRO20217Q6UXQ8 127 aa3.12□□□□□ -1.91
SMARCC1-206ENST00000485737 TMEM254Q8TBM7 123 aa3.12□□□□□ -1.91
SMARCC1-206ENST00000485737 RMI2Q96E14 147 aa3.12□□□□□ -1.91
SMARCC1-206ENST00000485737 CREBBPQ92793 2442 aa3.11□□□□□ -1.91
SMARCC1-206ENST00000485737 IGLV10-54A0A075B6I4 117 aa3.11□□□□□ -1.91
SMARCC1-206ENST00000485737 A0A0U1RQV1 116 aa3.11□□□□□ -1.91
SMARCC1-206ENST00000485737 LCE6AA0A183 80 aa3.11□□□□□ -1.91
SMARCC1-206ENST00000485737 A0A1B0GW54 56 aa3.11□□□□□ -1.91
SMARCC1-206ENST00000485737 IGKV2-30P06310 120 aa3.11□□□□□ -1.91
SMARCC1-206ENST00000485737 IGKV4-1P06312 121 aa3.11□□□□□ -1.91
SMARCC1-206ENST00000485737 VPREB1P12018 145 aa3.11□□□□□ -1.91
SMARCC1-206ENST00000485737 KRTAP10-9P60411 292 aa3.11□□□□□ -1.91
SMARCC1-206ENST00000485737 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
SMARCC1-206ENST00000485737 TM2D3Q9BRN9 247 aa3.11□□□□□ -1.91
SMARCC1-206ENST00000485737 OCR1Q9BZK8 76 aa3.11□□□□□ -1.91
SMARCC1-206ENST00000485737 C6orf48Q9UBA6 75 aa3.11□□□□□ -1.91
SMARCC1-206ENST00000485737 SNURFQ9Y675 71 aa3.11□□□□□ -1.91
SMARCC1-206ENST00000485737 SORL1Q92673 2214 aa3.11□□□□□ -1.91
SMARCC1-206ENST00000485737 F8WDY8 70 aa3.1□□□□□ -1.91
SMARCC1-206ENST00000485737 M0R378 163 aa3.1□□□□□ -1.91
SMARCC1-206ENST00000485737 BPY2O14599 106 aa3.1□□□□□ -1.91
SMARCC1-206ENST00000485737 PRYO14603 147 aa3.1□□□□□ -1.91
SMARCC1-206ENST00000485737 EGFEM1PQ0D2K5 195 aa3.1□□□□□ -1.91
SMARCC1-206ENST00000485737 LINC00336Q6ZUF6 198 aa3.1□□□□□ -1.91
SMARCC1-206ENST00000485737 CSPG4Q6UVK1 2322 aa3.09□□□□□ -1.91
SMARCC1-206ENST00000485737 FBN2P35556 2912 aa3.09□□□□□ -1.91
SMARCC1-206ENST00000485737 VPS13CQ709C8 3753 aa3.09□□□□□ -1.91
SMARCC1-206ENST00000485737 A0A096LPF7 62 aa3.09□□□□□ -1.91
SMARCC1-206ENST00000485737 AKAP9Q99996 3911 aa3.09□□□□□ -1.92
SMARCC1-206ENST00000485737 CFAP46Q8IYW2 2715 aa3.08□□□□□ -1.92
SMARCC1-206ENST00000485737 IGLV5-48A0A075B6I7 105 aa3.08□□□□□ -1.92
SMARCC1-206ENST00000485737 APOC4P55056 127 aa3.08□□□□□ -1.92
SMARCC1-206ENST00000485737 DAD1P61803 113 aa3.08□□□□□ -1.92
SMARCC1-206ENST00000485737 KRTAP26-1Q6PEX3 210 aa3.08□□□□□ -1.92
SMARCC1-206ENST00000485737 SCXQ7RTU7 201 aa3.08□□□□□ -1.92
SMARCC1-206ENST00000485737 Q8N9P0 234 aaPredicted RBP3.08□□□□□ -1.92
SMARCC1-206ENST00000485737 Q8NAQ8 132 aa3.08□□□□□ -1.92
SMARCC1-206ENST00000485737 USP9XQ93008 2570 aaPredicted RBP3.07□□□□□ -1.92
SMARCC1-206ENST00000485737 CELSR2Q9HCU4 2923 aa3.07□□□□□ -1.92
SMARCC1-206ENST00000485737 H3BNG1 76 aa3.07□□□□□ -1.92
SMARCC1-206ENST00000485737 FUSP35637 526 aaKnown RBP eCLIP3.07□□□□□ -1.92
SMARCC1-206ENST00000485737 ESRGQ1W209 222 aa3.07□□□□□ -1.92
SMARCC1-206ENST00000485737 WFDC11Q8NEX6 87 aa3.07□□□□□ -1.92
SMARCC1-206ENST00000485737 XAGE1AQ9HD64 81 aa3.07□□□□□ -1.92
SMARCC1-206ENST00000485737 KLK12Q9UKR0 248 aa3.07□□□□□ -1.92
SMARCC1-206ENST00000485737 SETXQ7Z333 2677 aaKnown RBP3.07□□□□□ -1.92
SMARCC1-206ENST00000485737 MXRA5Q9NR99 2828 aa3.07□□□□□ -1.92
SMARCC1-206ENST00000485737 ANK3Q12955 4377 aaKnown RBP3.07□□□□□ -1.92
SMARCC1-206ENST00000485737 PKD1L2Q7Z442 2459 aa3.07□□□□□ -1.92
SMARCC1-206ENST00000485737 SPART-AS1P0CW21 52 aa3.06□□□□□ -1.92
SMARCC1-206ENST00000485737 KRTAP10-3P60369 221 aa3.06□□□□□ -1.92
SMARCC1-206ENST00000485737 DEFB135Q30KP9 77 aa3.06□□□□□ -1.92
SMARCC1-206ENST00000485737 Q6ZTC4 211 aa3.06□□□□□ -1.92
SMARCC1-206ENST00000485737 C15orf56Q8N910 161 aa3.06□□□□□ -1.92
SMARCC1-206ENST00000485737 ZCCHC13Q8WW36 166 aaKnown RBP3.06□□□□□ -1.92
SMARCC1-206ENST00000485737 CAMK2N2Q96S95 79 aa3.06□□□□□ -1.92
SMARCC1-206ENST00000485737 KCNQ1DNQ9H478 68 aa3.06□□□□□ -1.92
SMARCC1-206ENST00000485737 LINC00474Q9P2X8 69 aa3.06□□□□□ -1.92
SMARCC1-206ENST00000485737 COL12A1Q99715 3063 aa3.06□□□□□ -1.92
SMARCC1-206ENST00000485737 ANKRD17O75179 2603 aaKnown RBP3.06□□□□□ -1.92
SMARCC1-206ENST00000485737 CRYBG3Q68DQ2 2970 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms