RNA–Protein interactions for RNA: ENST00000484841.5

ACTB-212, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,032 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-212ENST00000484841 A0A0U1RQV1 116 aa11.8□□□□□ -0.52
ACTB-212ENST00000484841 ATP6V1G1O75348 118 aa11.8□□□□□ -0.52
ACTB-212ENST00000484841 APOC3P02656 99 aa11.8□□□□□ -0.52
ACTB-212ENST00000484841 SNAPINO95295 136 aa11.79□□□□□ -0.52
ACTB-212ENST00000484841 KRTAP13-2Q52LG2 175 aa11.79□□□□□ -0.52
ACTB-212ENST00000484841 CBLN2Q8IUK8 224 aa11.78□□□□□ -0.52
ACTB-212ENST00000484841 M0R378 163 aa11.77□□□□□ -0.53
ACTB-212ENST00000484841 SVBPQ8N300 66 aa11.77□□□□□ -0.53
ACTB-212ENST00000484841 HIGD2AQ9BW72 106 aa11.76□□□□□ -0.53
ACTB-212ENST00000484841 A0A0U1RRA0 63 aa11.75□□□□□ -0.53
ACTB-212ENST00000484841 IFI27L1Q96BM0 104 aa11.74□□□□□ -0.53
ACTB-212ENST00000484841 CHCHD1Q96BP2 118 aaKnown RBP11.74□□□□□ -0.53
ACTB-212ENST00000484841 RETNLBQ9BQ08 111 aa11.74□□□□□ -0.53
ACTB-212ENST00000484841 TMEM223A0PJW6 202 aa11.73□□□□□ -0.53
ACTB-212ENST00000484841 MEIG1Q5JSS6 88 aa11.73□□□□□ -0.53
ACTB-212ENST00000484841 PLEKHB2Q96CS7 222 aa11.73□□□□□ -0.53
ACTB-212ENST00000484841 TRAV12-1A0A0B4J245 112 aa11.72□□□□□ -0.53
ACTB-212ENST00000484841 CTAG1AP78358 180 aa11.71□□□□□ -0.53
ACTB-212ENST00000484841 Q8NDZ9 215 aa11.71□□□□□ -0.53
ACTB-212ENST00000484841 LINC00587B1AMM8 73 aa11.7□□□□□ -0.54
ACTB-212ENST00000484841 ZNF706Q9Y5V0 76 aaPredicted RBP11.7□□□□□ -0.54
ACTB-212ENST00000484841 SMIM13P0DJ93 91 aa11.69□□□□□ -0.54
ACTB-212ENST00000484841 S100A12P80511 92 aa11.69□□□□□ -0.54
ACTB-212ENST00000484841 CDIP1Q9H305 208 aa11.69□□□□□ -0.54
ACTB-212ENST00000484841 HSBP1O75506 76 aa11.68□□□□□ -0.54
ACTB-212ENST00000484841 HERV-K104P63124 156 aa11.68□□□□□ -0.54
ACTB-212ENST00000484841 BOD1L2Q8IYS8 172 aa11.68□□□□□ -0.54
ACTB-212ENST00000484841 PRYO14603 147 aa11.67□□□□□ -0.54
ACTB-212ENST00000484841 C4orf48Q5BLP8 95 aa11.67□□□□□ -0.54
ACTB-212ENST00000484841 SPAG11AQ6PDA7 123 aa11.67□□□□□ -0.54
ACTB-212ENST00000484841 MAP1LC3CQ9BXW4 147 aa11.67□□□□□ -0.54
ACTB-212ENST00000484841 IGLV7-46A0A075B6I9 117 aa11.66□□□□□ -0.54
ACTB-212ENST00000484841 NCR3O14931 201 aa11.66□□□□□ -0.54
ACTB-212ENST00000484841 C3orf22Q8N5N4 141 aa11.66□□□□□ -0.54
ACTB-212ENST00000484841 MIR7-3HGQ8N6C7 128 aa11.65□□□□□ -0.54
ACTB-212ENST00000484841 SPRR4Q96PI1 79 aa11.65□□□□□ -0.54
ACTB-212ENST00000484841 MYMXA0A1B0GTQ4 84 aa11.64□□□□□ -0.55
ACTB-212ENST00000484841 ETDCA0A1B0GVM5 59 aa11.64□□□□□ -0.55
ACTB-212ENST00000484841 H0Y8G0 127 aa11.64□□□□□ -0.55
ACTB-212ENST00000484841 TPRXLQ17RH7 258 aa11.63□□□□□ -0.55
ACTB-212ENST00000484841 NDUFA12Q9UI09 145 aa11.63□□□□□ -0.55
ACTB-212ENST00000484841 LINC00337Q8N6G1 96 aa11.62□□□□□ -0.55
ACTB-212ENST00000484841 FAM19A2Q8N3H0 131 aa11.61□□□□□ -0.55
ACTB-212ENST00000484841 KCNQ1DNQ9H478 68 aa11.6□□□□□ -0.55
ACTB-212ENST00000484841 SMCR5Q8TEV8 140 aa11.59□□□□□ -0.55
ACTB-212ENST00000484841 PPDPFQ9H3Y8 114 aa11.59□□□□□ -0.55
ACTB-212ENST00000484841 LEPROTL1O95214 131 aa11.58□□□□□ -0.56
ACTB-212ENST00000484841 YPEL4Q96NS1 127 aa11.58□□□□□ -0.56
ACTB-212ENST00000484841 SPRR1AP35321 89 aa11.57□□□□□ -0.56
ACTB-212ENST00000484841 TRBV10-3A0A0K0K1G6 114 aa11.56□□□□□ -0.56
ACTB-212ENST00000484841 HERVK_113P61574 105 aa11.56□□□□□ -0.56
ACTB-212ENST00000484841 MIEN1Q9BRT3 115 aa11.56□□□□□ -0.56
ACTB-212ENST00000484841 LEPROTO15243 131 aa11.55□□□□□ -0.56
ACTB-212ENST00000484841 PLNP26678 52 aa11.55□□□□□ -0.56
ACTB-212ENST00000484841 Q8NBF4 154 aa11.55□□□□□ -0.56
ACTB-212ENST00000484841 FP248Q71RG6 208 aaPredicted RBP11.54□□□□□ -0.56
ACTB-212ENST00000484841 DAND5Q8N907 189 aa11.54□□□□□ -0.56
ACTB-212ENST00000484841 HSPB8Q9UJY1 196 aa11.54□□□□□ -0.56
ACTB-212ENST00000484841 TRGC2P03986 189 aa11.53□□□□□ -0.56
ACTB-212ENST00000484841 MUC2Q02817 5179 aa11.52□□□□□ -0.56
ACTB-212ENST00000484841 DDTP30046 118 aa11.52□□□□□ -0.57
ACTB-212ENST00000484841 GAGE2AQ6NT46 116 aa11.52□□□□□ -0.57
ACTB-212ENST00000484841 J3QQQ9 107 aa11.51□□□□□ -0.57
ACTB-212ENST00000484841 LGALS3P17931 250 aaKnown RBP11.51□□□□□ -0.57
ACTB-212ENST00000484841 TRBV10-2A0A0K0K1G8 114 aa11.5□□□□□ -0.57
ACTB-212ENST00000484841 KRTAP4-16G5E9R7 235 aaPredicted RBP11.5□□□□□ -0.57
ACTB-212ENST00000484841 SERF1AO75920 110 aa11.5□□□□□ -0.57
ACTB-212ENST00000484841 DPM2O94777 84 aa11.5□□□□□ -0.57
ACTB-212ENST00000484841 SPINK1P00995 79 aa11.5□□□□□ -0.57
ACTB-212ENST00000484841 S100A7L2Q5SY68 101 aa11.5□□□□□ -0.57
ACTB-212ENST00000484841 B5MCH6 92 aa11.49□□□□□ -0.57
ACTB-212ENST00000484841 FABP4P15090 132 aa11.49□□□□□ -0.57
ACTB-212ENST00000484841 NMUP48645 174 aa11.49□□□□□ -0.57
ACTB-212ENST00000484841 TSPEAR-AS2P59090 65 aa11.49□□□□□ -0.57
ACTB-212ENST00000484841 IGLV9-49A0A0B4J1Y8 123 aa11.48□□□□□ -0.57
ACTB-212ENST00000484841 LOC107984156A0A0G2JMH3 177 aa11.48□□□□□ -0.57
ACTB-212ENST00000484841 ARL17AQ8IVW1 177 aa11.48□□□□□ -0.57
ACTB-212ENST00000484841 SPANXB1Q9NS25 103 aaPredicted RBP11.48□□□□□ -0.57
ACTB-212ENST00000484841 IGKCP01834 107 aa11.47□□□□□ -0.57
ACTB-212ENST00000484841 LINC00483Q53H64 154 aa11.47□□□□□ -0.57
ACTB-212ENST00000484841 MOBPQ13875 183 aa11.45□□□□□ -0.58
ACTB-212ENST00000484841 JOSD1Q15040 202 aaPredicted RBP11.45□□□□□ -0.58
ACTB-212ENST00000484841 PMCHL2Q9BQD1 86 aa11.45□□□□□ -0.58
ACTB-212ENST00000484841 NDUFC2O95298 119 aa11.44□□□□□ -0.58
ACTB-212ENST00000484841 Q6ZRX8 168 aa11.44□□□□□ -0.58
ACTB-212ENST00000484841 SSBP3-AS1Q7Z2R9 100 aa11.44□□□□□ -0.58
ACTB-212ENST00000484841 ERC2-IT1O76042 136 aa11.42□□□□□ -0.58
ACTB-212ENST00000484841 LINC00310P59036 64 aa11.42□□□□□ -0.58
ACTB-212ENST00000484841 TRAV23DV6A0A075B6W5 121 aa11.41□□□□□ -0.58
ACTB-212ENST00000484841 HINT1P49773 126 aaPredicted RBP11.41□□□□□ -0.58
ACTB-212ENST00000484841 CBY1Q9Y3M2 126 aa11.41□□□□□ -0.58
ACTB-212ENST00000484841 NPC2P61916 151 aa11.4□□□□□ -0.58
ACTB-212ENST00000484841 Q9BRP9 147 aa11.4□□□□□ -0.58
ACTB-212ENST00000484841 RPS29P62273 56 aaKnown RBP11.39□□□□□ -0.59
ACTB-212ENST00000484841 C9orf153Q5TBE3 101 aa11.39□□□□□ -0.59
ACTB-212ENST00000484841 IGLV6-57P01721 117 aa11.38□□□□□ -0.59
ACTB-212ENST00000484841 KRTAP13-3Q3SY46 172 aa11.38□□□□□ -0.59
ACTB-212ENST00000484841 A0A0J9YXY3 114 aa11.37□□□□□ -0.59
ACTB-212ENST00000484841 SLC25A20O43772 301 aa11.37□□□□□ -0.59
ACTB-212ENST00000484841 LCE2AQ5TA79 106 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms