RNA–Protein interactions for RNA: ENST00000484645.1

RAPGEF4-212, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 3

Gene RAPGEF4, Length 842 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-212ENST00000484645 SCAPERQ9BY12 1400 aa-1.06□□□□□ -2.58
RAPGEF4-212ENST00000484645 A0A0C4DFX4 3053 aa-1.07□□□□□ -2.58
RAPGEF4-212ENST00000484645 DNAH1Q9P2D7 4330 aa-1.07□□□□□ -2.58
RAPGEF4-212ENST00000484645 UBE2L5PA0A1B0GUS4 154 aa-1.07□□□□□ -2.58
RAPGEF4-212ENST00000484645 H0YGG7 62 aa-1.07□□□□□ -2.58
RAPGEF4-212ENST00000484645 H3BNG1 76 aa-1.07□□□□□ -2.58
RAPGEF4-212ENST00000484645 TRAPPC2P0DI81 140 aa-1.07□□□□□ -2.58
RAPGEF4-212ENST00000484645 TRAPPC2BP0DI82 140 aa-1.07□□□□□ -2.58
RAPGEF4-212ENST00000484645 UBE2L3P68036 154 aaKnown RBP-1.07□□□□□ -2.58
RAPGEF4-212ENST00000484645 C9orf153Q5TBE3 101 aa-1.07□□□□□ -2.58
RAPGEF4-212ENST00000484645 MRPL34Q9BQ48 92 aaKnown RBP-1.07□□□□□ -2.58
RAPGEF4-212ENST00000484645 CUX1P39880 1505 aa-1.07□□□□□ -2.58
RAPGEF4-212ENST00000484645 DNHD1Q96M86 4753 aa-1.07□□□□□ -2.58
RAPGEF4-212ENST00000484645 C5P01031 1676 aa-1.07□□□□□ -2.58
RAPGEF4-212ENST00000484645 NAIPQ13075 1403 aa-1.07□□□□□ -2.58
RAPGEF4-212ENST00000484645 NCOA3Q9Y6Q9 1424 aa-1.07□□□□□ -2.58
RAPGEF4-212ENST00000484645 CICQ96RK0 1608 aaPredicted RBP-1.07□□□□□ -2.58
RAPGEF4-212ENST00000484645 TEX15Q9BXT5 2789 aa-1.08□□□□□ -2.58
RAPGEF4-212ENST00000484645 F6UZH7 168 aa-1.08□□□□□ -2.58
RAPGEF4-212ENST00000484645 SAA2P0DJI9 122 aaPredicted RBP-1.08□□□□□ -2.58
RAPGEF4-212ENST00000484645 FGF7P21781 194 aa-1.08□□□□□ -2.58
RAPGEF4-212ENST00000484645 C6orf201Q7Z4U5 140 aa-1.08□□□□□ -2.58
RAPGEF4-212ENST00000484645 DPH3P1Q9H4G8 78 aa-1.08□□□□□ -2.58
RAPGEF4-212ENST00000484645 TRANK1O15050 2925 aa-1.08□□□□□ -2.58
RAPGEF4-212ENST00000484645 ANKRD11Q6UB99 2663 aaPredicted RBP-1.08□□□□□ -2.58
RAPGEF4-212ENST00000484645 FAM186AA6NE01 2351 aa-1.08□□□□□ -2.58
RAPGEF4-212ENST00000484645 KTN1Q86UP2 1357 aaKnown RBP-1.08□□□□□ -2.58
RAPGEF4-212ENST00000484645 C4AP0C0L4 1744 aa-1.09□□□□□ -2.58
RAPGEF4-212ENST00000484645 C4BP0C0L5 1744 aa-1.09□□□□□ -2.58
RAPGEF4-212ENST00000484645 RIF1Q5UIP0 2472 aaKnown RBP-1.09□□□□□ -2.58
RAPGEF4-212ENST00000484645 COX6CP09669 75 aa-1.09□□□□□ -2.58
RAPGEF4-212ENST00000484645 HEPN1Q6WQI6 88 aa-1.09□□□□□ -2.58
RAPGEF4-212ENST00000484645 LINC00846Q9NV44 126 aa-1.09□□□□□ -2.58
RAPGEF4-212ENST00000484645 PRO1854Q9UHT4 67 aa-1.09□□□□□ -2.58
RAPGEF4-212ENST00000484645 MTORP42345 2549 aa-1.09□□□□□ -2.58
RAPGEF4-212ENST00000484645 SPHKAPQ2M3C7 1700 aa-1.09□□□□□ -2.58
RAPGEF4-212ENST00000484645 LRRK2Q5S007 2527 aa-1.1□□□□□ -2.58
RAPGEF4-212ENST00000484645 NDUFA2O43678 99 aa-1.1□□□□□ -2.59
RAPGEF4-212ENST00000484645 SNCAP37840 140 aa-1.1□□□□□ -2.59
RAPGEF4-212ENST00000484645 ATP5EP56381 51 aaPredicted RBP-1.1□□□□□ -2.59
RAPGEF4-212ENST00000484645 HSD52Q0P140 79 aa-1.1□□□□□ -2.59
RAPGEF4-212ENST00000484645 WFDC13Q8IUB5 93 aa-1.1□□□□□ -2.59
RAPGEF4-212ENST00000484645 C12orf57Q99622 126 aa-1.1□□□□□ -2.59
RAPGEF4-212ENST00000484645 QSER1Q2KHR3 1735 aa-1.1□□□□□ -2.59
RAPGEF4-212ENST00000484645 DYNC1H1Q14204 4646 aaKnown RBP-1.11□□□□□ -2.59
RAPGEF4-212ENST00000484645 MYOM2P54296 1465 aa-1.11□□□□□ -2.59
RAPGEF4-212ENST00000484645 TRAV30A0A087WSZ9 112 aa-1.11□□□□□ -2.59
RAPGEF4-212ENST00000484645 AKAIN1P0CW23 69 aa-1.11□□□□□ -2.59
RAPGEF4-212ENST00000484645 DEFB107AQ8IZN7 70 aa-1.11□□□□□ -2.59
RAPGEF4-212ENST00000484645 PKD1L3Q7Z443 1732 aa-1.12□□□□□ -2.59
RAPGEF4-212ENST00000484645 NRKQ7Z2Y5 1582 aa-1.12□□□□□ -2.59
RAPGEF4-212ENST00000484645 NAP1L6A6NFF2 107 aa-1.12□□□□□ -2.59
RAPGEF4-212ENST00000484645 FAM24AA6NFZ4 105 aa-1.12□□□□□ -2.59
RAPGEF4-212ENST00000484645 K7EP13 123 aa-1.12□□□□□ -2.59
RAPGEF4-212ENST00000484645 CCL22O00626 93 aa-1.12□□□□□ -2.59
RAPGEF4-212ENST00000484645 PP6455Q8WZ26 134 aa-1.12□□□□□ -2.59
RAPGEF4-212ENST00000484645 GCN1Q92616 2671 aaKnown RBP-1.12□□□□□ -2.59
RAPGEF4-212ENST00000484645 CMYA5Q8N3K9 4069 aa-1.12□□□□□ -2.59
RAPGEF4-212ENST00000484645 ARHGAP5Q13017 1502 aa-1.12□□□□□ -2.59
RAPGEF4-212ENST00000484645 WDR87Q6ZQQ6 2873 aa-1.12□□□□□ -2.59
RAPGEF4-212ENST00000484645 DNAH8Q96JB1 4490 aa-1.13□□□□□ -2.59
RAPGEF4-212ENST00000484645 USP9XQ93008 2570 aaPredicted RBP-1.13□□□□□ -2.59
RAPGEF4-212ENST00000484645 NBEAQ8NFP9 2946 aa-1.13□□□□□ -2.59
RAPGEF4-212ENST00000484645 CRYM-AS1A6NIL9 109 aa-1.13□□□□□ -2.59
RAPGEF4-212ENST00000484645 DEFA5Q01523 94 aa-1.13□□□□□ -2.59
RAPGEF4-212ENST00000484645 CCDC58Q4VC31 144 aa-1.13□□□□□ -2.59
RAPGEF4-212ENST00000484645 CDKN2A-AS1Q9UH64 79 aa-1.13□□□□□ -2.59
RAPGEF4-212ENST00000484645 UTP20O75691 2785 aaKnown RBP-1.13□□□□□ -2.59
RAPGEF4-212ENST00000484645 PREX1Q8TCU6 1659 aa-1.13□□□□□ -2.59
RAPGEF4-212ENST00000484645 CRYBG1Q9Y4K1 1723 aa-1.14□□□□□ -2.59
RAPGEF4-212ENST00000484645 A0A0G2JND7 137 aa-1.14□□□□□ -2.59
RAPGEF4-212ENST00000484645 C7orf77A4D0Y5 90 aa-1.14□□□□□ -2.59
RAPGEF4-212ENST00000484645 H0Y9P7 68 aa-1.14□□□□□ -2.59
RAPGEF4-212ENST00000484645 ASIPP42127 132 aa-1.14□□□□□ -2.59
RAPGEF4-212ENST00000484645 TRIOO75962 3097 aa-1.14□□□□□ -2.59
RAPGEF4-212ENST00000484645 SCN11AQ9UI33 1791 aa-1.14□□□□□ -2.59
RAPGEF4-212ENST00000484645 RELNP78509 3460 aa-1.14□□□□□ -2.59
RAPGEF4-212ENST00000484645 UBR3Q6ZT12 1888 aa-1.15□□□□□ -2.59
RAPGEF4-212ENST00000484645 RGPD3A6NKT7 1758 aaPredicted RBP-1.15□□□□□ -2.59
RAPGEF4-212ENST00000484645 RGPD4Q7Z3J3 1758 aa-1.15□□□□□ -2.59
RAPGEF4-212ENST00000484645 H3BQF6 201 aa-1.15□□□□□ -2.59
RAPGEF4-212ENST00000484645 SNAPC5O75971 98 aa-1.15□□□□□ -2.59
RAPGEF4-212ENST00000484645 HIGD1BQ9P298 99 aa-1.15□□□□□ -2.59
RAPGEF4-212ENST00000484645 NBEAL2Q6ZNJ1 2754 aa-1.15□□□□□ -2.59
RAPGEF4-212ENST00000484645 ROCK2O75116 1388 aaKnown RBP-1.16□□□□□ -2.59
RAPGEF4-212ENST00000484645 SPTY2D1-AS1A0A0U1RR47 76 aa-1.16□□□□□ -2.6
RAPGEF4-212ENST00000484645 GNGT1P63211 74 aa-1.16□□□□□ -2.6
RAPGEF4-212ENST00000484645 MT1HP80294 61 aa-1.16□□□□□ -2.6
RAPGEF4-212ENST00000484645 MAPKBP1O60336 1514 aa-1.16□□□□□ -2.6
RAPGEF4-212ENST00000484645 CLIP1P30622 1438 aa-1.16□□□□□ -2.6
RAPGEF4-212ENST00000484645 CEP290O15078 2479 aa-1.16□□□□□ -2.6
RAPGEF4-212ENST00000484645 SAMD9Q5K651 1589 aa-1.17□□□□□ -2.6
RAPGEF4-212ENST00000484645 MYH4Q9Y623 1939 aa-1.17□□□□□ -2.6
RAPGEF4-212ENST00000484645 TRBV7-7A0A0K0K1E9 115 aa-1.17□□□□□ -2.6
RAPGEF4-212ENST00000484645 TMEM262E9PQX1 116 aa-1.17□□□□□ -2.6
RAPGEF4-212ENST00000484645 ARMS2P0C7Q2 107 aa-1.17□□□□□ -2.6
RAPGEF4-212ENST00000484645 TSC22D3Q99576 134 aa-1.17□□□□□ -2.6
RAPGEF4-212ENST00000484645 VAMP8Q9BV40 100 aa-1.17□□□□□ -2.6
RAPGEF4-212ENST00000484645 FAM107BQ9H098 131 aa-1.17□□□□□ -2.6
RAPGEF4-212ENST00000484645 ACACBO00763 2458 aa-1.17□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms