RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 FAUP35544 74 aaKnown RBP1.39□□□□□ -2.19
MCF2-207ENST00000483690 WFDC2Q14508 124 aa1.39□□□□□ -2.19
MCF2-207ENST00000483690 INSL4Q14641 139 aa1.39□□□□□ -2.19
MCF2-207ENST00000483690 SERP2Q8N6R1 65 aa1.39□□□□□ -2.19
MCF2-207ENST00000483690 FAM213BQ8TBF2 198 aa1.39□□□□□ -2.19
MCF2-207ENST00000483690 CACNA1EQ15878 2313 aa1.39□□□□□ -2.19
MCF2-207ENST00000483690 KNL1Q8NG31 2342 aa1.39□□□□□ -2.19
MCF2-207ENST00000483690 PLXNA2O75051 1894 aa1.39□□□□□ -2.19
MCF2-207ENST00000483690 PDCD11Q14690 1871 aaKnown RBP1.39□□□□□ -2.19
MCF2-207ENST00000483690 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
MCF2-207ENST00000483690 DMXL2Q8TDJ6 3036 aa1.39□□□□□ -2.19
MCF2-207ENST00000483690 AKAP13Q12802 2813 aa1.39□□□□□ -2.19
MCF2-207ENST00000483690 CFAP46Q8IYW2 2715 aa1.38□□□□□ -2.19
MCF2-207ENST00000483690 ITPR1Q14643 2758 aa1.38□□□□□ -2.19
MCF2-207ENST00000483690 PTPRQQ9UMZ3 2332 aa1.38□□□□□ -2.19
MCF2-207ENST00000483690 IGHV1-24A0A0C4DH33 117 aa1.38□□□□□ -2.19
MCF2-207ENST00000483690 NDUFC1O43677 76 aa1.38□□□□□ -2.19
MCF2-207ENST00000483690 CD52P31358 61 aa1.38□□□□□ -2.19
MCF2-207ENST00000483690 SPINT3P49223 89 aa1.38□□□□□ -2.19
MCF2-207ENST00000483690 RHOHQ15669 191 aa1.38□□□□□ -2.19
MCF2-207ENST00000483690 NMSQ5H8A3 153 aa1.38□□□□□ -2.19
MCF2-207ENST00000483690 SPANXN1Q5VSR9 72 aa1.38□□□□□ -2.19
MCF2-207ENST00000483690 MRPL35Q9NZE8 188 aaKnown RBP1.38□□□□□ -2.19
MCF2-207ENST00000483690 NAV3Q8IVL0 2385 aa1.38□□□□□ -2.19
MCF2-207ENST00000483690 ABCA2Q9BZC7 2435 aa1.38□□□□□ -2.19
MCF2-207ENST00000483690 POLQO75417 2590 aa1.38□□□□□ -2.19
MCF2-207ENST00000483690 LOC400499M0QZD8 3231 aa1.38□□□□□ -2.19
MCF2-207ENST00000483690 KALRNO60229 2985 aa1.37□□□□□ -2.19
MCF2-207ENST00000483690 TRAV2A0A0B4J234 112 aa1.37□□□□□ -2.19
MCF2-207ENST00000483690 NAP1L6A6NFF2 107 aa1.37□□□□□ -2.19
MCF2-207ENST00000483690 BCE1O60756 84 aa1.37□□□□□ -2.19
MCF2-207ENST00000483690 SFTA3P0C7M3 94 aa1.37□□□□□ -2.19
MCF2-207ENST00000483690 PIRTP0C851 137 aa1.37□□□□□ -2.19
MCF2-207ENST00000483690 SNRPFP62306 86 aaKnown RBP1.37□□□□□ -2.19
MCF2-207ENST00000483690 CFAP126Q5VTH2 177 aa1.37□□□□□ -2.19
MCF2-207ENST00000483690 KRTAP5-10Q6L8G5 202 aa1.37□□□□□ -2.19
MCF2-207ENST00000483690 KRTAP19-3Q7Z4W3 81 aa1.37□□□□□ -2.19
MCF2-207ENST00000483690 PCNX1Q96RV3 2341 aa1.37□□□□□ -2.19
MCF2-207ENST00000483690 GOLGA4Q13439 2230 aaKnown RBP1.36□□□□□ -2.19
MCF2-207ENST00000483690 ZFHX3Q15911 3703 aa1.36□□□□□ -2.19
MCF2-207ENST00000483690 URB1O60287 2271 aaKnown RBP1.36□□□□□ -2.19
MCF2-207ENST00000483690 VPS13CQ709C8 3753 aa1.36□□□□□ -2.19
MCF2-207ENST00000483690 TRAV13-2A0A0B4J235 113 aa1.36□□□□□ -2.19
MCF2-207ENST00000483690 UMAD1C9J7I0 102 aa1.36□□□□□ -2.19
MCF2-207ENST00000483690 F2Z2F3 143 aa1.36□□□□□ -2.19
MCF2-207ENST00000483690 ACYP1P07311 99 aa1.36□□□□□ -2.19
MCF2-207ENST00000483690 CAV3P56539 151 aa1.36□□□□□ -2.19
MCF2-207ENST00000483690 FXYD6P3P58550 94 aa1.36□□□□□ -2.19
MCF2-207ENST00000483690 XAF1Q6GPH4 301 aa1.36□□□□□ -2.19
MCF2-207ENST00000483690 SPATA8Q6RVD6 105 aa1.36□□□□□ -2.19
MCF2-207ENST00000483690 DYNLRB2Q8TF09 96 aa1.36□□□□□ -2.19
MCF2-207ENST00000483690 TMEM141Q96I45 108 aa1.36□□□□□ -2.19
MCF2-207ENST00000483690 NXT2Q9NPJ8 142 aaKnown RBP1.36□□□□□ -2.19
MCF2-207ENST00000483690 COL12A1Q99715 3063 aa1.36□□□□□ -2.19
MCF2-207ENST00000483690 CSMD1Q96PZ7 3565 aa1.36□□□□□ -2.19
MCF2-207ENST00000483690 APC2O95996 2303 aa1.35□□□□□ -2.19
MCF2-207ENST00000483690 SETD2Q9BYW2 2564 aaPredicted RBP1.35□□□□□ -2.19
MCF2-207ENST00000483690 CMYA5Q8N3K9 4069 aa1.35□□□□□ -2.19
MCF2-207ENST00000483690 MUC22E2RYF6 1773 aaPredicted RBP1.35□□□□□ -2.19
MCF2-207ENST00000483690 TMEM30CPA0ZSE6 113 aa1.35□□□□□ -2.19
MCF2-207ENST00000483690 CRYM-AS1A6NIL9 109 aa1.35□□□□□ -2.19
MCF2-207ENST00000483690 H7BZZ5 65 aa1.35□□□□□ -2.19
MCF2-207ENST00000483690 SMIM13P0DJ93 91 aa1.35□□□□□ -2.19
MCF2-207ENST00000483690 GNG11P61952 73 aa1.35□□□□□ -2.19
MCF2-207ENST00000483690 RBM3P98179 157 aaKnown RBP1.35□□□□□ -2.19
MCF2-207ENST00000483690 TMEM170BQ5T4T1 132 aa1.35□□□□□ -2.19
MCF2-207ENST00000483690 SLC48A1Q6P1K1 146 aa1.35□□□□□ -2.19
MCF2-207ENST00000483690 CYP2G1PQ6ZSU1 146 aa1.35□□□□□ -2.19
MCF2-207ENST00000483690 PLAC4Q8WY50 150 aa1.35□□□□□ -2.19
MCF2-207ENST00000483690 CYP4F30PQ9H0H9 118 aa1.35□□□□□ -2.19
MCF2-207ENST00000483690 MRPL36Q9P0J6 103 aaKnown RBP1.35□□□□□ -2.19
MCF2-207ENST00000483690 HIGD1BQ9P298 99 aa1.35□□□□□ -2.19
MCF2-207ENST00000483690 LINC00474Q9P2X8 69 aa1.35□□□□□ -2.19
MCF2-207ENST00000483690 NDUFA12Q9UI09 145 aa1.35□□□□□ -2.19
MCF2-207ENST00000483690 MGAQ8IWI9 3026 aa1.35□□□□□ -2.19
MCF2-207ENST00000483690 KNTC1P50748 2209 aa1.35□□□□□ -2.19
MCF2-207ENST00000483690 ACACAQ13085 2346 aa1.34□□□□□ -2.19
MCF2-207ENST00000483690 TRBV7-1A0A0A6YYK4 115 aa1.34□□□□□ -2.19
MCF2-207ENST00000483690 A0A0D9SG42 100 aa1.34□□□□□ -2.19
MCF2-207ENST00000483690 SMIM11AP58511 58 aa1.34□□□□□ -2.19
MCF2-207ENST00000483690 UBE2G1P62253 170 aa1.34□□□□□ -2.19
MCF2-207ENST00000483690 KLKP1Q107X0 134 aa1.34□□□□□ -2.19
MCF2-207ENST00000483690 PSMG4Q5JS54 123 aa1.34□□□□□ -2.19
MCF2-207ENST00000483690 S100A7L2Q5SY68 101 aa1.34□□□□□ -2.19
MCF2-207ENST00000483690 LYPD5Q6UWN5 251 aa1.34□□□□□ -2.19
MCF2-207ENST00000483690 LINC00643Q86TS7 51 aa1.34□□□□□ -2.19
MCF2-207ENST00000483690 C10orf95Q9H7T3 257 aa1.34□□□□□ -2.19
MCF2-207ENST00000483690 AHCTF1Q8WYP5 2266 aa1.34□□□□□ -2.2
MCF2-207ENST00000483690 DOPEY2Q9Y3R5 2298 aa1.34□□□□□ -2.2
MCF2-207ENST00000483690 LRRK2Q5S007 2527 aa1.34□□□□□ -2.2
MCF2-207ENST00000483690 NBASA2RRP1 2371 aa1.34□□□□□ -2.2
MCF2-207ENST00000483690 SPAG17Q6Q759 2223 aa1.34□□□□□ -2.2
MCF2-207ENST00000483690 TSC2P49815 1807 aa1.33□□□□□ -2.2
MCF2-207ENST00000483690 TLN1Q9Y490 2541 aaKnown RBP1.33□□□□□ -2.2
MCF2-207ENST00000483690 PI4KAP42356 2102 aa1.33□□□□□ -2.2
MCF2-207ENST00000483690 ATMQ13315 3056 aa1.33□□□□□ -2.2
MCF2-207ENST00000483690 TRBV10-3A0A0K0K1G6 114 aa1.33□□□□□ -2.2
MCF2-207ENST00000483690 ZNF137PP52743 207 aa1.33□□□□□ -2.2
MCF2-207ENST00000483690 UBE2D3P61077 147 aa1.33□□□□□ -2.2
MCF2-207ENST00000483690 UBE2D2P62837 147 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms