RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 Q8N814 137 aa4.12□□□□□ -1.75
CLK1-212ENST00000482590 TYMSOSQ8TAI1 123 aa4.12□□□□□ -1.75
CLK1-212ENST00000482590 SFT2D1Q8WV19 159 aa4.12□□□□□ -1.75
CLK1-212ENST00000482590 PPP1R1CQ8WVI7 109 aa4.12□□□□□ -1.75
CLK1-212ENST00000482590 S100ZQ8WXG8 99 aa4.12□□□□□ -1.75
CLK1-212ENST00000482590 NAA38Q9BRA0 125 aaKnown RBP4.12□□□□□ -1.75
CLK1-212ENST00000482590 TRBV27A0A0K0K1C4 114 aa4.11□□□□□ -1.75
CLK1-212ENST00000482590 FAM236AA0A1B0GUQ0 79 aa4.11□□□□□ -1.75
CLK1-212ENST00000482590 FAM236BA0A1B0GV22 79 aa4.11□□□□□ -1.75
CLK1-212ENST00000482590 TRBV6-4A0A1B0GX49 114 aa4.11□□□□□ -1.75
CLK1-212ENST00000482590 LRCOL1A6NCL2 159 aa4.11□□□□□ -1.75
CLK1-212ENST00000482590 LECT2O14960 151 aa4.11□□□□□ -1.75
CLK1-212ENST00000482590 SLC25A20O43772 301 aa4.11□□□□□ -1.75
CLK1-212ENST00000482590 MGST1P10620 155 aaKnown RBP4.11□□□□□ -1.75
CLK1-212ENST00000482590 LELP1Q5T871 98 aa4.11□□□□□ -1.75
CLK1-212ENST00000482590 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.1□□□□□ -1.75
CLK1-212ENST00000482590 TRBV24-1A0A075B6N3 115 aa4.1□□□□□ -1.75
CLK1-212ENST00000482590 IGHV3-73A0A0B4J1V6 119 aa4.1□□□□□ -1.75
CLK1-212ENST00000482590 SH2D1AO60880 128 aa4.1□□□□□ -1.75
CLK1-212ENST00000482590 MPC2O95563 127 aa4.1□□□□□ -1.75
CLK1-212ENST00000482590 LCE3EQ5T5B0 92 aa4.1□□□□□ -1.75
CLK1-212ENST00000482590 CFAP126Q5VTH2 177 aa4.1□□□□□ -1.75
CLK1-212ENST00000482590 ZFP2Q6ZN57 461 aa4.1□□□□□ -1.75
CLK1-212ENST00000482590 MIR7-3HGQ8N6C7 128 aa4.1□□□□□ -1.75
CLK1-212ENST00000482590 C5orf17Q8NAS9 161 aa4.1□□□□□ -1.75
CLK1-212ENST00000482590 ATP6V0E2Q8NHE4 81 aa4.1□□□□□ -1.75
CLK1-212ENST00000482590 A6NED7 52 aa4.09□□□□□ -1.75
CLK1-212ENST00000482590 A8MWV9 139 aa4.09□□□□□ -1.75
CLK1-212ENST00000482590 HIST1H2BKO60814 126 aa4.09□□□□□ -1.75
CLK1-212ENST00000482590 TCRAP04437 139 aa4.09□□□□□ -1.75
CLK1-212ENST00000482590 HIST1H2BJP06899 126 aa4.09□□□□□ -1.75
CLK1-212ENST00000482590 ARL14EPLP0DKL9 152 aa4.09□□□□□ -1.75
CLK1-212ENST00000482590 MEIG1Q5JSS6 88 aa4.09□□□□□ -1.75
CLK1-212ENST00000482590 LCE3AQ5TA76 89 aa4.09□□□□□ -1.75
CLK1-212ENST00000482590 DPPA3Q6W0C5 159 aa4.09□□□□□ -1.75
CLK1-212ENST00000482590 LINC00299Q6ZSB3 139 aa4.09□□□□□ -1.75
CLK1-212ENST00000482590 HIST3H2BBQ8N257 126 aa4.09□□□□□ -1.75
CLK1-212ENST00000482590 TVP23CQ96ET8 276 aa4.09□□□□□ -1.75
CLK1-212ENST00000482590 TTTY13Q9BZ97 58 aa4.09□□□□□ -1.75
CLK1-212ENST00000482590 OSTCQ9NRP0 149 aa4.09□□□□□ -1.75
CLK1-212ENST00000482590 FAT3Q8TDW7 4589 aa4.09□□□□□ -1.75
CLK1-212ENST00000482590 ASIPP42127 132 aa4.08□□□□□ -1.76
CLK1-212ENST00000482590 LRP1Q07954 4544 aaKnown RBP4.08□□□□□ -1.76
CLK1-212ENST00000482590 LGALSLQ3ZCW2 172 aaPredicted RBP4.08□□□□□ -1.76
CLK1-212ENST00000482590 CYB561D1Q8N8Q1 229 aa4.08□□□□□ -1.76
CLK1-212ENST00000482590 DEFB104AQ8WTQ1 72 aa4.08□□□□□ -1.76
CLK1-212ENST00000482590 UBE2WQ96B02 151 aa4.08□□□□□ -1.76
CLK1-212ENST00000482590 HIST1H2BLQ99880 126 aa4.08□□□□□ -1.76
CLK1-212ENST00000482590 TMEM167BQ9NRX6 74 aa4.08□□□□□ -1.76
CLK1-212ENST00000482590 IGKV2D-24A0A075B6R9 120 aa4.07□□□□□ -1.76
CLK1-212ENST00000482590 A0A087WWC5 75 aa4.07□□□□□ -1.76
CLK1-212ENST00000482590 RNASE3P12724 160 aaKnown RBP4.07□□□□□ -1.76
CLK1-212ENST00000482590 GCHFRP30047 84 aa4.07□□□□□ -1.76
CLK1-212ENST00000482590 WFDC2Q14508 124 aa4.07□□□□□ -1.76
CLK1-212ENST00000482590 FAM74A4Q5TZK3 123 aa4.07□□□□□ -1.76
CLK1-212ENST00000482590 SPANXA2-OT1Q8N9U9 137 aa4.07□□□□□ -1.76
CLK1-212ENST00000482590 TRAPPC1Q9Y5R8 145 aa4.07□□□□□ -1.76
CLK1-212ENST00000482590 HMCN2Q8NDA2 5059 aa4.06□□□□□ -1.76
CLK1-212ENST00000482590 GRIFINA4D1Z8 144 aa4.06□□□□□ -1.76
CLK1-212ENST00000482590 H3BVH4 76 aa4.06□□□□□ -1.76
CLK1-212ENST00000482590 K7ERJ3 54 aa4.06□□□□□ -1.76
CLK1-212ENST00000482590 UQCRQO14949 82 aa4.06□□□□□ -1.76
CLK1-212ENST00000482590 NPYP01303 97 aa4.06□□□□□ -1.76
CLK1-212ENST00000482590 CRPP02741 224 aa4.06□□□□□ -1.76
CLK1-212ENST00000482590 Q6ZSA8 131 aa4.06□□□□□ -1.76
CLK1-212ENST00000482590 OR2T35Q8NGX2 323 aa4.06□□□□□ -1.76
CLK1-212ENST00000482590 PRELID3AQ96N28 172 aa4.06□□□□□ -1.76
CLK1-212ENST00000482590 SCGB3A1Q96QR1 104 aa4.06□□□□□ -1.76
CLK1-212ENST00000482590 SNHG12Q9BXW3 62 aa4.06□□□□□ -1.76
CLK1-212ENST00000482590 C19orf71A6NCJ1 209 aa4.05□□□□□ -1.76
CLK1-212ENST00000482590 CCDC179H3BU77 68 aa4.05□□□□□ -1.76
CLK1-212ENST00000482590 TPT1P13693 172 aaKnown RBP4.05□□□□□ -1.76
CLK1-212ENST00000482590 DSCR10P59022 87 aa4.05□□□□□ -1.76
CLK1-212ENST00000482590 UBE2G1P62253 170 aa4.05□□□□□ -1.76
CLK1-212ENST00000482590 SERF2P84101 59 aa4.05□□□□□ -1.76
CLK1-212ENST00000482590 ELOBQ15370 118 aa4.05□□□□□ -1.76
CLK1-212ENST00000482590 SDIM1Q6ZPB5 146 aa4.05□□□□□ -1.76
CLK1-212ENST00000482590 GTF2H5Q6ZYL4 71 aa4.05□□□□□ -1.76
CLK1-212ENST00000482590 Q86TA4 180 aa4.05□□□□□ -1.76
CLK1-212ENST00000482590 TEN1Q86WV5 123 aa4.05□□□□□ -1.76
CLK1-212ENST00000482590 SMCR5Q8TEV8 140 aa4.05□□□□□ -1.76
CLK1-212ENST00000482590 KLK12Q9UKR0 248 aa4.05□□□□□ -1.76
CLK1-212ENST00000482590 EPDR1Q9UM22 224 aa4.05□□□□□ -1.76
CLK1-212ENST00000482590 ARL2-SNX15V9GYD0 113 aa4.05□□□□□ -1.76
CLK1-212ENST00000482590 PKHD1L1Q86WI1 4243 aa4.04□□□□□ -1.76
CLK1-212ENST00000482590 RPS10P46783 165 aaKnown RBP4.04□□□□□ -1.76
CLK1-212ENST00000482590 HSD52Q0P140 79 aa4.04□□□□□ -1.76
CLK1-212ENST00000482590 Q0VG73 95 aa4.04□□□□□ -1.76
CLK1-212ENST00000482590 MIAQ16674 131 aa4.04□□□□□ -1.76
CLK1-212ENST00000482590 C7orf65Q6ZTY9 151 aa4.04□□□□□ -1.76
CLK1-212ENST00000482590 DPH3Q96FX2 82 aa4.04□□□□□ -1.76
CLK1-212ENST00000482590 MIEN1Q9BRT3 115 aa4.04□□□□□ -1.76
CLK1-212ENST00000482590 SMDT1Q9H4I9 107 aa4.04□□□□□ -1.76
CLK1-212ENST00000482590 CTXND1A0A1B0GTU2 59 aa4.03□□□□□ -1.76
CLK1-212ENST00000482590 ARMS2P0C7Q2 107 aa4.03□□□□□ -1.76
CLK1-212ENST00000482590 TMEM258P61165 79 aa4.03□□□□□ -1.76
CLK1-212ENST00000482590 ZNF56Q15929 161 aa4.03□□□□□ -1.76
CLK1-212ENST00000482590 COL5A1-AS1Q5SY13 56 aa4.03□□□□□ -1.76
CLK1-212ENST00000482590 EIF5AL1Q6IS14 154 aaKnown RBP4.03□□□□□ -1.76
CLK1-212ENST00000482590 DIRC1Q969H9 104 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms