RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 Q8NDZ9 215 aa8.13□□□□□ -1.11
HDAC6-224ENST00000481929 NAT8Q9UHE5 227 aa8.13□□□□□ -1.11
HDAC6-224ENST00000481929 IGLV9-49A0A0B4J1Y8 123 aa8.12□□□□□ -1.11
HDAC6-224ENST00000481929 G0S2P27469 103 aa8.12□□□□□ -1.11
HDAC6-224ENST00000481929 LINC00483Q53H64 154 aa8.12□□□□□ -1.11
HDAC6-224ENST00000481929 COX6B2Q6YFQ2 88 aa8.12□□□□□ -1.11
HDAC6-224ENST00000481929 SSBP3-AS1Q7Z2R9 100 aa8.12□□□□□ -1.11
HDAC6-224ENST00000481929 ATP5L2Q7Z4Y8 100 aa8.12□□□□□ -1.11
HDAC6-224ENST00000481929 SMCR5Q8TEV8 140 aa8.11□□□□□ -1.11
HDAC6-224ENST00000481929 ERG28Q9UKR5 140 aa8.11□□□□□ -1.11
HDAC6-224ENST00000481929 FLGP20930 4061 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-224ENST00000481929 GAGE2AQ6NT46 116 aa8.1□□□□□ -1.11
HDAC6-224ENST00000481929 TOMM6Q96B49 74 aa8.1□□□□□ -1.11
HDAC6-224ENST00000481929 COX17Q14061 63 aa8.09□□□□□ -1.11
HDAC6-224ENST00000481929 NXT2Q9NPJ8 142 aaKnown RBP8.09□□□□□ -1.11
HDAC6-224ENST00000481929 H3BRM9 83 aa8.08□□□□□ -1.12
HDAC6-224ENST00000481929 ERASQ7Z444 233 aa8.08□□□□□ -1.12
HDAC6-224ENST00000481929 SCGB3A1Q96QR1 104 aa8.08□□□□□ -1.12
HDAC6-224ENST00000481929 MRPL18Q9H0U6 180 aaKnown RBP8.08□□□□□ -1.12
HDAC6-224ENST00000481929 PRYO14603 147 aa8.07□□□□□ -1.12
HDAC6-224ENST00000481929 SSPOA2VEC9 5147 aa8.07□□□□□ -1.12
HDAC6-224ENST00000481929 C9orf92A6NGG3 77 aa8.06□□□□□ -1.12
HDAC6-224ENST00000481929 ETDCA0A1B0GVM5 59 aa8.05□□□□□ -1.12
HDAC6-224ENST00000481929 ZNF625Q96I27 306 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-224ENST00000481929 IGLV5-39A0A0G2JS06 123 aa8.04□□□□□ -1.12
HDAC6-224ENST00000481929 ADCYAP1P18509 176 aa8.04□□□□□ -1.12
HDAC6-224ENST00000481929 CST9LQ9H4G1 147 aa8.04□□□□□ -1.12
HDAC6-224ENST00000481929 USH2AO75445 5202 aa8.03□□□□□ -1.12
HDAC6-224ENST00000481929 SPRR1AP35321 89 aa8.03□□□□□ -1.12
HDAC6-224ENST00000481929 C9JQL5 133 aa8.02□□□□□ -1.13
HDAC6-224ENST00000481929 KRTAP4-16G5E9R7 235 aaPredicted RBP8.01□□□□□ -1.13
HDAC6-224ENST00000481929 PMVKQ15126 192 aa8.01□□□□□ -1.13
HDAC6-224ENST00000481929 FCGBPQ9Y6R7 5405 aaPredicted RBP8□□□□□ -1.13
HDAC6-224ENST00000481929 C9orf153Q5TBE3 101 aa8□□□□□ -1.13
HDAC6-224ENST00000481929 KCNQ1DNQ9H478 68 aa8□□□□□ -1.13
HDAC6-224ENST00000481929 LINC01549A6NIU2 74 aa7.99□□□□□ -1.13
HDAC6-224ENST00000481929 SFTA2Q6UW10 78 aa7.99□□□□□ -1.13
HDAC6-224ENST00000481929 ERC2-IT1O76042 136 aa7.98□□□□□ -1.13
HDAC6-224ENST00000481929 LINC00158P58513 81 aa7.98□□□□□ -1.13
HDAC6-224ENST00000481929 NCR3O14931 201 aa7.97□□□□□ -1.13
HDAC6-224ENST00000481929 CFC1P0CG37 223 aa7.97□□□□□ -1.13
HDAC6-224ENST00000481929 CLLU1Q5K131 121 aa7.97□□□□□ -1.13
HDAC6-224ENST00000481929 LIMD2Q9BT23 127 aa7.97□□□□□ -1.13
HDAC6-224ENST00000481929 IGLV6-57P01721 117 aa7.96□□□□□ -1.14
HDAC6-224ENST00000481929 IGLC3P0DOY3 106 aa7.96□□□□□ -1.14
HDAC6-224ENST00000481929 ZNF22P17026 224 aaPredicted RBP7.96□□□□□ -1.14
HDAC6-224ENST00000481929 PEA15Q15121 130 aa7.96□□□□□ -1.14
HDAC6-224ENST00000481929 A0A0U1RRA0 63 aa7.95□□□□□ -1.14
HDAC6-224ENST00000481929 B5MCH6 92 aa7.95□□□□□ -1.14
HDAC6-224ENST00000481929 S100A12P80511 92 aa7.95□□□□□ -1.14
HDAC6-224ENST00000481929 BOD1L2Q8IYS8 172 aa7.95□□□□□ -1.14
HDAC6-224ENST00000481929 SLC7A5P1Q8MH63 180 aa7.95□□□□□ -1.14
HDAC6-224ENST00000481929 TRAV9-1A0A075B6T8 112 aa7.94□□□□□ -1.14
HDAC6-224ENST00000481929 TRBV10-3A0A0K0K1G6 114 aa7.94□□□□□ -1.14
HDAC6-224ENST00000481929 Q9BRP9 147 aa7.92□□□□□ -1.14
HDAC6-224ENST00000481929 ATP6V1G1O75348 118 aa7.91□□□□□ -1.14
HDAC6-224ENST00000481929 RPL37P61927 97 aaKnown RBP7.91□□□□□ -1.14
HDAC6-224ENST00000481929 NDUFA5Q16718 116 aa7.91□□□□□ -1.14
HDAC6-224ENST00000481929 NDUFA6P56556 154 aa7.9□□□□□ -1.14
HDAC6-224ENST00000481929 KIAA1644Q3SXP7 199 aa7.9□□□□□ -1.14
HDAC6-224ENST00000481929 HRCT1Q6UXD1 115 aa7.9□□□□□ -1.14
HDAC6-224ENST00000481929 LINC01546A6NGU7 62 aa7.89□□□□□ -1.15
HDAC6-224ENST00000481929 Q6ZRX8 168 aa7.89□□□□□ -1.15
HDAC6-224ENST00000481929 COMMD7Q86VX2 200 aa7.88□□□□□ -1.15
HDAC6-224ENST00000481929 SMIM13P0DJ93 91 aa7.87□□□□□ -1.15
HDAC6-224ENST00000481929 TMEM170BQ5T4T1 132 aa7.87□□□□□ -1.15
HDAC6-224ENST00000481929 Q6Q795 121 aa7.87□□□□□ -1.15
HDAC6-224ENST00000481929 KRTAP19-1Q8IUB9 90 aa7.87□□□□□ -1.15
HDAC6-224ENST00000481929 ANAPC16Q96DE5 110 aa7.87□□□□□ -1.15
HDAC6-224ENST00000481929 MT-ND4LP03901 98 aa7.86□□□□□ -1.15
HDAC6-224ENST00000481929 MIR7-3HGQ8N6C7 128 aa7.86□□□□□ -1.15
HDAC6-224ENST00000481929 MEIG1Q5JSS6 88 aa7.85□□□□□ -1.15
HDAC6-224ENST00000481929 FA2HQ7L5A8 372 aa7.85□□□□□ -1.15
HDAC6-224ENST00000481929 KRTAP9-8Q9BYQ0 159 aa7.85□□□□□ -1.15
HDAC6-224ENST00000481929 C11orf86A6NJI1 115 aa7.84□□□□□ -1.15
HDAC6-224ENST00000481929 DDTP30046 118 aa7.84□□□□□ -1.15
HDAC6-224ENST00000481929 JOSD1Q15040 202 aaPredicted RBP7.84□□□□□ -1.15
HDAC6-224ENST00000481929 SMCO4Q9NRQ5 59 aa7.84□□□□□ -1.15
HDAC6-224ENST00000481929 ST20-AS1Q8NBB2 130 aa7.82□□□□□ -1.16
HDAC6-224ENST00000481929 MACF1Q9UPN3 7388 aaKnown RBP7.81□□□□□ -1.16
HDAC6-224ENST00000481929 SYNE2Q8WXH0 6885 aaKnown RBP7.81□□□□□ -1.16
HDAC6-224ENST00000481929 UQCC3Q6UW78 93 aa7.8□□□□□ -1.16
HDAC6-224ENST00000481929 TRBV10-2A0A0K0K1G8 114 aa7.79□□□□□ -1.16
HDAC6-224ENST00000481929 C5orf52A6NGY3 159 aa7.79□□□□□ -1.16
HDAC6-224ENST00000481929 SLC25A34Q6PIV7 304 aa7.79□□□□□ -1.16
HDAC6-224ENST00000481929 BAGE3Q86Y29 109 aa7.79□□□□□ -1.16
HDAC6-224ENST00000481929 TMEM218A2RU14 115 aa7.78□□□□□ -1.16
HDAC6-224ENST00000481929 LINC00587B1AMM8 73 aa7.78□□□□□ -1.16
HDAC6-224ENST00000481929 S100A1P23297 94 aa7.78□□□□□ -1.16
HDAC6-224ENST00000481929 HERV-K104P63124 156 aa7.78□□□□□ -1.16
HDAC6-224ENST00000481929 A0A096LNJ9 63 aa7.77□□□□□ -1.17
HDAC6-224ENST00000481929 MAP1LC3CQ9BXW4 147 aa7.77□□□□□ -1.17
HDAC6-224ENST00000481929 TMEM223A0PJW6 202 aa7.76□□□□□ -1.17
HDAC6-224ENST00000481929 CD164Q04900 197 aa7.76□□□□□ -1.17
HDAC6-224ENST00000481929 S100A7L2Q5SY68 101 aa7.76□□□□□ -1.17
HDAC6-224ENST00000481929 C10orf91Q5T1B1 145 aa7.76□□□□□ -1.17
HDAC6-224ENST00000481929 TRAV23DV6A0A075B6W5 121 aa7.75□□□□□ -1.17
HDAC6-224ENST00000481929 H7C2G1 150 aa7.75□□□□□ -1.17
HDAC6-224ENST00000481929 SPRR1BP22528 89 aa7.75□□□□□ -1.17
HDAC6-224ENST00000481929 C1orf195Q5TG92 126 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms