RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 RPL39P62891 51 aaKnown RBP7.86□□□□□ -1.15
HPS4-212ENST00000481910 LCE6AA0A183 80 aa7.85□□□□□ -1.15
HPS4-212ENST00000481910 TEX49A0A1B0GTD5 131 aa7.85□□□□□ -1.15
HPS4-212ENST00000481910 C2orf66Q6UXQ4 117 aa7.85□□□□□ -1.15
HPS4-212ENST00000481910 KTN1-AS1Q86SY8 53 aa7.85□□□□□ -1.15
HPS4-212ENST00000481910 CYSTM1Q9H1C7 97 aa7.85□□□□□ -1.15
HPS4-212ENST00000481910 A0A1B0GUV1 79 aa7.84□□□□□ -1.15
HPS4-212ENST00000481910 M0R2N4 97 aa7.84□□□□□ -1.16
HPS4-212ENST00000481910 ANGP03950 147 aaKnown RBP7.84□□□□□ -1.16
HPS4-212ENST00000481910 UBE2D4Q9Y2X8 147 aa7.84□□□□□ -1.16
HPS4-212ENST00000481910 IGLV4-60A0A075B6I1 120 aa7.83□□□□□ -1.16
HPS4-212ENST00000481910 IGKV2D-26A0A0A0MRZ7 120 aa7.83□□□□□ -1.16
HPS4-212ENST00000481910 NBDYA0A0U1RRE5 68 aa7.83□□□□□ -1.16
HPS4-212ENST00000481910 KLK12Q9UKR0 248 aa7.83□□□□□ -1.16
HPS4-212ENST00000481910 NDUFC1O43677 76 aa7.82□□□□□ -1.16
HPS4-212ENST00000481910 SCGB1D4Q6XE38 83 aa7.82□□□□□ -1.16
HPS4-212ENST00000481910 TOMM6Q96B49 74 aa7.82□□□□□ -1.16
HPS4-212ENST00000481910 PRO1854Q9UHT4 67 aa7.82□□□□□ -1.16
HPS4-212ENST00000481910 TIMM21Q9BVV7 248 aa7.82□□□□□ -1.16
HPS4-212ENST00000481910 DYNC2H1Q8NCM8 4307 aaKnown RBP7.81□□□□□ -1.16
HPS4-212ENST00000481910 C2orf82Q6UX34 121 aa7.81□□□□□ -1.16
HPS4-212ENST00000481910 LINC00269Q8N2A0 174 aa7.81□□□□□ -1.16
HPS4-212ENST00000481910 KRTAP1-5Q9BYS1 174 aa7.81□□□□□ -1.16
HPS4-212ENST00000481910 A0A096LNJ9 63 aa7.8□□□□□ -1.16
HPS4-212ENST00000481910 IBA57-AS1B1ANH7 110 aa7.8□□□□□ -1.16
HPS4-212ENST00000481910 TIMM17BO60830 172 aa7.8□□□□□ -1.16
HPS4-212ENST00000481910 SCGB3A1Q96QR1 104 aa7.8□□□□□ -1.16
HPS4-212ENST00000481910 OPRPNQ99935 248 aaPredicted RBP7.8□□□□□ -1.16
HPS4-212ENST00000481910 CDC42SE2Q9NRR3 84 aa7.8□□□□□ -1.16
HPS4-212ENST00000481910 PLA2G2DQ9UNK4 145 aa7.8□□□□□ -1.16
HPS4-212ENST00000481910 C8orf87E5RJ46 101 aa7.8□□□□□ -1.16
HPS4-212ENST00000481910 CCKP06307 115 aa7.8□□□□□ -1.16
HPS4-212ENST00000481910 CLPSL2Q6UWE3 100 aa7.8□□□□□ -1.16
HPS4-212ENST00000481910 IGKV3OR2-268A0A0C4DH90 116 aa7.79□□□□□ -1.16
HPS4-212ENST00000481910 IGIPA6NJ69 53 aa7.79□□□□□ -1.16
HPS4-212ENST00000481910 CRPP02741 224 aa7.79□□□□□ -1.16
HPS4-212ENST00000481910 REG3AQ06141 175 aa7.79□□□□□ -1.16
HPS4-212ENST00000481910 RNASE13Q5GAN3 156 aaKnown RBP7.79□□□□□ -1.16
HPS4-212ENST00000481910 Q6ZR54 194 aa7.79□□□□□ -1.16
HPS4-212ENST00000481910 PLECQ15149 4684 aaKnown RBP7.79□□□□□ -1.16
HPS4-212ENST00000481910 ENHOQ6UWT2 76 aa7.78□□□□□ -1.16
HPS4-212ENST00000481910 Q9HAA7 133 aa7.78□□□□□ -1.16
HPS4-212ENST00000481910 TRAV8-3A0A0A6YYJ7 113 aa7.78□□□□□ -1.16
HPS4-212ENST00000481910 LOC100996750A0A140TA64 210 aa7.78□□□□□ -1.16
HPS4-212ENST00000481910 PLNP26678 52 aa7.78□□□□□ -1.16
HPS4-212ENST00000481910 DAND5Q8N907 189 aa7.78□□□□□ -1.16
HPS4-212ENST00000481910 FAM104AQ969W3 186 aa7.78□□□□□ -1.16
HPS4-212ENST00000481910 TMEM141Q96I45 108 aa7.78□□□□□ -1.16
HPS4-212ENST00000481910 TIMM17AQ99595 171 aa7.78□□□□□ -1.16
HPS4-212ENST00000481910 KRTAP4-6Q9BYQ5 205 aa7.78□□□□□ -1.16
HPS4-212ENST00000481910 PRR34Q9NV39 138 aa7.78□□□□□ -1.16
HPS4-212ENST00000481910 IGLV4-3A0A075B6K6 122 aa7.77□□□□□ -1.17
HPS4-212ENST00000481910 PAPPA-AS1Q5QFB9 102 aa7.77□□□□□ -1.17
HPS4-212ENST00000481910 MAPKAPK5-AS1Q8N8E1 139 aa7.77□□□□□ -1.17
HPS4-212ENST00000481910 TRBV30A0A0K0K1B3 111 aa7.76□□□□□ -1.17
HPS4-212ENST00000481910 ZNF22P17026 224 aaPredicted RBP7.76□□□□□ -1.17
HPS4-212ENST00000481910 MIAQ16674 131 aa7.76□□□□□ -1.17
HPS4-212ENST00000481910 LYSTQ99698 3801 aa7.76□□□□□ -1.17
HPS4-212ENST00000481910 IGLV10-54A0A075B6I4 117 aa7.75□□□□□ -1.17
HPS4-212ENST00000481910 C1orf134Q5TEV5 83 aa7.75□□□□□ -1.17
HPS4-212ENST00000481910 C6orf223Q8N319 242 aa7.75□□□□□ -1.17
HPS4-212ENST00000481910 IGKV2D-24A0A075B6R9 120 aa7.74□□□□□ -1.17
HPS4-212ENST00000481910 LINC00959A0A1B0GUT2 108 aa7.74□□□□□ -1.17
HPS4-212ENST00000481910 CFC1BP0CG36 223 aa7.74□□□□□ -1.17
HPS4-212ENST00000481910 CFC1P0CG37 223 aa7.74□□□□□ -1.17
HPS4-212ENST00000481910 PHF5AQ7RTV0 110 aaKnown RBP7.74□□□□□ -1.17
HPS4-212ENST00000481910 H7BZZ5 65 aa7.74□□□□□ -1.17
HPS4-212ENST00000481910 M0R378 163 aa7.74□□□□□ -1.17
HPS4-212ENST00000481910 KLKP1Q107X0 134 aa7.74□□□□□ -1.17
HPS4-212ENST00000481910 SS18Q15532 418 aa7.74□□□□□ -1.17
HPS4-212ENST00000481910 RMI2Q96E14 147 aa7.74□□□□□ -1.17
HPS4-212ENST00000481910 AMELXQ99217 191 aa7.74□□□□□ -1.17
HPS4-212ENST00000481910 PRSS1P07477 247 aa7.73□□□□□ -1.17
HPS4-212ENST00000481910 XCL1P47992 114 aa7.73□□□□□ -1.17
HPS4-212ENST00000481910 Q6JHZ5 121 aa7.73□□□□□ -1.17
HPS4-212ENST00000481910 PSCAO43653 123 aa7.72□□□□□ -1.17
HPS4-212ENST00000481910 COX6CP09669 75 aa7.72□□□□□ -1.17
HPS4-212ENST00000481910 CHCHD10Q8WYQ3 142 aaPredicted RBP7.72□□□□□ -1.17
HPS4-212ENST00000481910 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.71□□□□□ -1.18
HPS4-212ENST00000481910 TRIAP1O43715 76 aa7.7□□□□□ -1.18
HPS4-212ENST00000481910 TTTY13Q9BZ97 58 aa7.7□□□□□ -1.18
HPS4-212ENST00000481910 RBM3P98179 157 aaKnown RBP7.7□□□□□ -1.18
HPS4-212ENST00000481910 Q6ZRN7 208 aaPredicted RBP7.7□□□□□ -1.18
HPS4-212ENST00000481910 SMCR5Q8TEV8 140 aa7.7□□□□□ -1.18
HPS4-212ENST00000481910 INAFM2P0DMQ5 153 aa7.69□□□□□ -1.18
HPS4-212ENST00000481910 LINC00242Q5T6M2 205 aa7.69□□□□□ -1.18
HPS4-212ENST00000481910 KRTAP26-1Q6PEX3 210 aa7.69□□□□□ -1.18
HPS4-212ENST00000481910 VPS13DQ5THJ4 4388 aa7.68□□□□□ -1.18
HPS4-212ENST00000481910 TRAV13-2A0A0B4J235 113 aa7.68□□□□□ -1.18
HPS4-212ENST00000481910 TRAV12-1A0A0B4J245 112 aa7.68□□□□□ -1.18
HPS4-212ENST00000481910 ALMS1Q8TCU4 4167 aa7.68□□□□□ -1.18
HPS4-212ENST00000481910 A0A0J9YXV3 536 aa7.68□□□□□ -1.18
HPS4-212ENST00000481910 RTL8CO15255 209 aa7.68□□□□□ -1.18
HPS4-212ENST00000481910 Q6ZVQ6 151 aa7.68□□□□□ -1.18
HPS4-212ENST00000481910 MRPL35Q9NZE8 188 aaKnown RBP7.68□□□□□ -1.18
HPS4-212ENST00000481910 A0A0A0MQY5 61 aa7.67□□□□□ -1.18
HPS4-212ENST00000481910 COX6A2Q02221 97 aa7.67□□□□□ -1.18
HPS4-212ENST00000481910 FAM19A3Q7Z5A8 133 aa7.67□□□□□ -1.18
HPS4-212ENST00000481910 LINC00474Q9P2X8 69 aa7.67□□□□□ -1.18
HPS4-212ENST00000481910 DNAH1Q9P2D7 4330 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms