RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 CICQ96RK0 1608 aaPredicted RBP-1.02□□□□□ -2.57
KDM1A-204ENST00000481879 DNAH14Q0VDD8 3507 aa-1.03□□□□□ -2.57
KDM1A-204ENST00000481879 PRDM2Q13029 1718 aa-1.03□□□□□ -2.57
KDM1A-204ENST00000481879 ARHGEF12Q9NZN5 1544 aa-1.03□□□□□ -2.57
KDM1A-204ENST00000481879 FAM25AB3EWG3 89 aa-1.03□□□□□ -2.57
KDM1A-204ENST00000481879 FAM25CB3EWG5 89 aa-1.03□□□□□ -2.57
KDM1A-204ENST00000481879 FAM25GB3EWG6 89 aa-1.03□□□□□ -2.57
KDM1A-204ENST00000481879 GNG7O60262 68 aa-1.03□□□□□ -2.57
KDM1A-204ENST00000481879 MGPP08493 103 aa-1.03□□□□□ -2.57
KDM1A-204ENST00000481879 SPRR4Q96PI1 79 aa-1.03□□□□□ -2.57
KDM1A-204ENST00000481879 NXT2Q9NPJ8 142 aaKnown RBP-1.03□□□□□ -2.57
KDM1A-204ENST00000481879 FRYLO94915 3013 aa-1.03□□□□□ -2.57
KDM1A-204ENST00000481879 SZT2Q5T011 3432 aa-1.03□□□□□ -2.58
KDM1A-204ENST00000481879 SETBP1Q9Y6X0 1596 aa-1.04□□□□□ -2.58
KDM1A-204ENST00000481879 TULP4Q9NRJ4 1543 aa-1.04□□□□□ -2.58
KDM1A-204ENST00000481879 CFTRP13569 1480 aa-1.04□□□□□ -2.58
KDM1A-204ENST00000481879 MIF4GDA9UHW6 222 aaKnown RBP-1.04□□□□□ -2.58
KDM1A-204ENST00000481879 FGF7P21781 194 aa-1.04□□□□□ -2.58
KDM1A-204ENST00000481879 SELENOWP63302 87 aa-1.04□□□□□ -2.58
KDM1A-204ENST00000481879 Q56UQ5 140 aa-1.04□□□□□ -2.58
KDM1A-204ENST00000481879 LINC01600Q96MT4 127 aa-1.04□□□□□ -2.58
KDM1A-204ENST00000481879 MUC3AQ02505 3323 aa-1.04□□□□□ -2.58
KDM1A-204ENST00000481879 DCHS1Q96JQ0 3298 aa-1.04□□□□□ -2.58
KDM1A-204ENST00000481879 CEP250Q9BV73 2442 aa-1.05□□□□□ -2.58
KDM1A-204ENST00000481879 MYH6P13533 1939 aa-1.05□□□□□ -2.58
KDM1A-204ENST00000481879 ARAP2Q8WZ64 1704 aa-1.05□□□□□ -2.58
KDM1A-204ENST00000481879 TRAV30A0A087WSZ9 112 aa-1.05□□□□□ -2.58
KDM1A-204ENST00000481879 CATR1Q13166 79 aa-1.05□□□□□ -2.58
KDM1A-204ENST00000481879 HEPN1Q6WQI6 88 aa-1.05□□□□□ -2.58
KDM1A-204ENST00000481879 WFDC13Q8IUB5 93 aa-1.05□□□□□ -2.58
KDM1A-204ENST00000481879 LINC00470Q9BZP3 86 aa-1.05□□□□□ -2.58
KDM1A-204ENST00000481879 CDC42SE2Q9NRR3 84 aa-1.05□□□□□ -2.58
KDM1A-204ENST00000481879 FAIMQ9NVQ4 179 aa-1.05□□□□□ -2.58
KDM1A-204ENST00000481879 ARL2-SNX15V9GYD0 113 aa-1.05□□□□□ -2.58
KDM1A-204ENST00000481879 KIF21AQ7Z4S6 1674 aa-1.05□□□□□ -2.58
KDM1A-204ENST00000481879 BTAF1O14981 1849 aa-1.05□□□□□ -2.58
KDM1A-204ENST00000481879 MARF1Q9Y4F3 1742 aaKnown RBP-1.06□□□□□ -2.58
KDM1A-204ENST00000481879 H7BZZ5 65 aa-1.06□□□□□ -2.58
KDM1A-204ENST00000481879 I3L3M4 83 aa-1.06□□□□□ -2.58
KDM1A-204ENST00000481879 RPS29P62273 56 aaKnown RBP-1.06□□□□□ -2.58
KDM1A-204ENST00000481879 LELP1Q5T871 98 aa-1.06□□□□□ -2.58
KDM1A-204ENST00000481879 COMMD6Q7Z4G1 85 aa-1.06□□□□□ -2.58
KDM1A-204ENST00000481879 C5orf38Q86SI9 138 aa-1.06□□□□□ -2.58
KDM1A-204ENST00000481879 ARL11Q969Q4 196 aa-1.06□□□□□ -2.58
KDM1A-204ENST00000481879 MRPL34Q9BQ48 92 aaKnown RBP-1.06□□□□□ -2.58
KDM1A-204ENST00000481879 CRIPTQ9P021 101 aa-1.06□□□□□ -2.58
KDM1A-204ENST00000481879 DOCK2Q92608 1830 aa-1.06□□□□□ -2.58
KDM1A-204ENST00000481879 MKI67P46013 3256 aaKnown RBP-1.06□□□□□ -2.58
KDM1A-204ENST00000481879 GRIN2AQ12879 1464 aa-1.06□□□□□ -2.58
KDM1A-204ENST00000481879 ANKRD36A6QL64 1941 aa-1.07□□□□□ -2.58
KDM1A-204ENST00000481879 LOC100130705A0A1B0GUX0 176 aa-1.07□□□□□ -2.58
KDM1A-204ENST00000481879 APOC2P02655 101 aa-1.07□□□□□ -2.58
KDM1A-204ENST00000481879 FAM223AQ8IWN6 122 aa-1.07□□□□□ -2.58
KDM1A-204ENST00000481879 C8orf59Q8N0T1 100 aaPredicted RBP-1.07□□□□□ -2.58
KDM1A-204ENST00000481879 MYOZ3Q8TDC0 251 aa-1.07□□□□□ -2.58
KDM1A-204ENST00000481879 LCN9Q8WX39 176 aa-1.07□□□□□ -2.58
KDM1A-204ENST00000481879 LINC00846Q9NV44 126 aa-1.07□□□□□ -2.58
KDM1A-204ENST00000481879 CDKN2A-AS1Q9UH64 79 aa-1.07□□□□□ -2.58
KDM1A-204ENST00000481879 LOC400499M0QZD8 3231 aa-1.07□□□□□ -2.58
KDM1A-204ENST00000481879 NKTRP30414 1462 aaKnown RBP-1.07□□□□□ -2.58
KDM1A-204ENST00000481879 CCDC141Q6ZP82 1450 aa-1.07□□□□□ -2.58
KDM1A-204ENST00000481879 PCNTO95613 3336 aa-1.07□□□□□ -2.58
KDM1A-204ENST00000481879 CPSF1Q10570 1443 aaKnown RBP-1.07□□□□□ -2.58
KDM1A-204ENST00000481879 ALKQ9UM73 1620 aa-1.07□□□□□ -2.58
KDM1A-204ENST00000481879 ARHGEF5Q12774 1597 aa-1.08□□□□□ -2.58
KDM1A-204ENST00000481879 NWD2Q9ULI1 1742 aa-1.08□□□□□ -2.58
KDM1A-204ENST00000481879 CCL22O00626 93 aa-1.08□□□□□ -2.58
KDM1A-204ENST00000481879 BTG2P78543 158 aa-1.08□□□□□ -2.58
KDM1A-204ENST00000481879 PRLHP81277 87 aa-1.08□□□□□ -2.58
KDM1A-204ENST00000481879 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.08□□□□□ -2.58
KDM1A-204ENST00000481879 PAIP2BQ9ULR5 123 aaKnown RBP-1.08□□□□□ -2.58
KDM1A-204ENST00000481879 FYCO1Q9BQS8 1478 aa-1.09□□□□□ -2.58
KDM1A-204ENST00000481879 WHAMMP3Q1A5X7 153 aa-1.09□□□□□ -2.58
KDM1A-204ENST00000481879 HIGD1BQ9P298 99 aa-1.09□□□□□ -2.58
KDM1A-204ENST00000481879 UQCR10Q9UDW1 63 aa-1.09□□□□□ -2.58
KDM1A-204ENST00000481879 RAPGEF6Q8TEU7 1601 aa-1.09□□□□□ -2.58
KDM1A-204ENST00000481879 RGPD2P0DJD1 1756 aa-1.09□□□□□ -2.58
KDM1A-204ENST00000481879 A0A0G2JMZ2 1700 aa-1.09□□□□□ -2.58
KDM1A-204ENST00000481879 RIMS1Q86UR5 1692 aaKnown RBP-1.1□□□□□ -2.58
KDM1A-204ENST00000481879 MAGI2Q86UL8 1455 aa-1.1□□□□□ -2.59
KDM1A-204ENST00000481879 OOSP1A8MZH6 123 aa-1.1□□□□□ -2.59
KDM1A-204ENST00000481879 TNP1P09430 55 aa-1.1□□□□□ -2.59
KDM1A-204ENST00000481879 SFTA2Q6UW10 78 aa-1.1□□□□□ -2.59
KDM1A-204ENST00000481879 USP34Q70CQ2 3546 aa-1.1□□□□□ -2.59
KDM1A-204ENST00000481879 PDCD11Q14690 1871 aaKnown RBP-1.11□□□□□ -2.59
KDM1A-204ENST00000481879 CDC42BPAQ5VT25 1732 aa-1.11□□□□□ -2.59
KDM1A-204ENST00000481879 FAM223BA6NKX1 122 aa-1.11□□□□□ -2.59
KDM1A-204ENST00000481879 NDUFA2O43678 99 aa-1.11□□□□□ -2.59
KDM1A-204ENST00000481879 PP6455Q8WZ26 134 aa-1.11□□□□□ -2.59
KDM1A-204ENST00000481879 QRICH2Q9H0J4 1663 aa-1.11□□□□□ -2.59
KDM1A-204ENST00000481879 PSME4Q14997 1843 aa-1.12□□□□□ -2.59
KDM1A-204ENST00000481879 NCOA3Q9Y6Q9 1424 aa-1.12□□□□□ -2.59
KDM1A-204ENST00000481879 GNG11P61952 73 aa-1.12□□□□□ -2.59
KDM1A-204ENST00000481879 SEC11AP67812 179 aa-1.12□□□□□ -2.59
KDM1A-204ENST00000481879 FAM167A-AS1Q96KT0 104 aa-1.12□□□□□ -2.59
KDM1A-204ENST00000481879 PRO1933Q9H354 126 aa-1.12□□□□□ -2.59
KDM1A-204ENST00000481879 XRN1Q8IZH2 1706 aaKnown RBP-1.12□□□□□ -2.59
KDM1A-204ENST00000481879 ABCC10Q5T3U5 1492 aa-1.12□□□□□ -2.59
KDM1A-204ENST00000481879 TCHHQ07283 1943 aa-1.13□□□□□ -2.59
KDM1A-204ENST00000481879 MMP24-AS1A0A0U1RRL7 71 aa-1.13□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms