RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 CACNA1BQ00975 2339 aa6.93□□□□□ -1.3
PRPF4B-206ENST00000481109 RHPN1-AS1Q9BWJ2 59 aa6.93□□□□□ -1.3
PRPF4B-206ENST00000481109 ATRXP46100 2492 aa6.92□□□□□ -1.3
PRPF4B-206ENST00000481109 ANKHD1Q8IWZ3 2542 aaKnown RBP6.92□□□□□ -1.3
PRPF4B-206ENST00000481109 H3BPC8 53 aa6.92□□□□□ -1.3
PRPF4B-206ENST00000481109 HIGD2BQ4VC39 106 aa6.92□□□□□ -1.3
PRPF4B-206ENST00000481109 MINOS1-NBL1R4GNA1 71 aa6.91□□□□□ -1.3
PRPF4B-206ENST00000481109 CNBPP62633 177 aaKnown RBP6.91□□□□□ -1.3
PRPF4B-206ENST00000481109 ST20-AS1Q8NBB2 130 aa6.91□□□□□ -1.3
PRPF4B-206ENST00000481109 WFDC10AQ9H1F0 79 aa6.91□□□□□ -1.3
PRPF4B-206ENST00000481109 SORL1Q92673 2214 aa6.91□□□□□ -1.3
PRPF4B-206ENST00000481109 SPINK13Q1W4C9 94 aa6.9□□□□□ -1.31
PRPF4B-206ENST00000481109 G3V318 75 aa6.89□□□□□ -1.31
PRPF4B-206ENST00000481109 FSHBP01225 129 aa6.89□□□□□ -1.31
PRPF4B-206ENST00000481109 PRR3P79522 188 aaKnown RBP6.89□□□□□ -1.31
PRPF4B-206ENST00000481109 Q8IZM0 81 aa6.89□□□□□ -1.31
PRPF4B-206ENST00000481109 AKAP6Q13023 2319 aa6.89□□□□□ -1.31
PRPF4B-206ENST00000481109 VPS13CQ709C8 3753 aa6.89□□□□□ -1.31
PRPF4B-206ENST00000481109 IGF2RP11717 2491 aa6.89□□□□□ -1.31
PRPF4B-206ENST00000481109 SPTBN1Q01082 2364 aaKnown RBP6.89□□□□□ -1.31
PRPF4B-206ENST00000481109 CELSR1Q9NYQ6 3014 aa6.88□□□□□ -1.31
PRPF4B-206ENST00000481109 COL6A6A6NMZ7 2263 aa6.88□□□□□ -1.31
PRPF4B-206ENST00000481109 IGKV3-7A0A075B6H7 116 aa6.87□□□□□ -1.31
PRPF4B-206ENST00000481109 IGLV6-57P01721 117 aa6.87□□□□□ -1.31
PRPF4B-206ENST00000481109 PRB2P02812 416 aaPredicted RBP6.87□□□□□ -1.31
PRPF4B-206ENST00000481109 COL12A1Q99715 3063 aa6.87□□□□□ -1.31
PRPF4B-206ENST00000481109 MAP1AP78559 2803 aaPredicted RBP6.87□□□□□ -1.31
PRPF4B-206ENST00000481109 RETNLBQ9BQ08 111 aa6.87□□□□□ -1.31
PRPF4B-206ENST00000481109 ODF3L2Q3SX64 289 aa6.86□□□□□ -1.31
PRPF4B-206ENST00000481109 COA5Q86WW8 74 aa6.86□□□□□ -1.31
PRPF4B-206ENST00000481109 USMG5Q96IX5 58 aa6.86□□□□□ -1.31
PRPF4B-206ENST00000481109 KLK12Q9UKR0 248 aa6.86□□□□□ -1.31
PRPF4B-206ENST00000481109 SPAG11BQ08648 103 aa6.84□□□□□ -1.31
PRPF4B-206ENST00000481109 Q8NAQ8 132 aa6.84□□□□□ -1.31
PRPF4B-206ENST00000481109 LINC00476Q8WZB0 136 aa6.84□□□□□ -1.31
PRPF4B-206ENST00000481109 ZNF706Q9Y5V0 76 aaPredicted RBP6.84□□□□□ -1.31
PRPF4B-206ENST00000481109 H3BUA1 57 aa6.84□□□□□ -1.31
PRPF4B-206ENST00000481109 IGKV3-20P01619 116 aa6.84□□□□□ -1.31
PRPF4B-206ENST00000481109 SPINK7P58062 85 aa6.84□□□□□ -1.31
PRPF4B-206ENST00000481109 IGHV4-28A0A0C4DH34 117 aa6.83□□□□□ -1.32
PRPF4B-206ENST00000481109 IGHV4-61A0A0C4DH41 118 aa6.83□□□□□ -1.32
PRPF4B-206ENST00000481109 RTL8CO15255 209 aa6.83□□□□□ -1.32
PRPF4B-206ENST00000481109 DSCR9P59020 149 aa6.83□□□□□ -1.32
PRPF4B-206ENST00000481109 B4DSR2 109 aa6.83□□□□□ -1.32
PRPF4B-206ENST00000481109 ADM2Q7Z4H4 148 aa6.83□□□□□ -1.32
PRPF4B-206ENST00000481109 A8MTW9 85 aa6.82□□□□□ -1.32
PRPF4B-206ENST00000481109 IGHV3-11P01762 117 aa6.82□□□□□ -1.32
PRPF4B-206ENST00000481109 SPTAN1Q13813 2472 aaKnown RBP6.82□□□□□ -1.32
PRPF4B-206ENST00000481109 FBXL19-AS1Q494R0 122 aa6.82□□□□□ -1.32
PRPF4B-206ENST00000481109 C9orf163Q8N9P6 203 aa6.82□□□□□ -1.32
PRPF4B-206ENST00000481109 IGLV1-51P01701 117 aa6.81□□□□□ -1.32
PRPF4B-206ENST00000481109 ZFP36P26651 326 aaKnown RBP6.81□□□□□ -1.32
PRPF4B-206ENST00000481109 SPTBN4Q9H254 2564 aa6.81□□□□□ -1.32
PRPF4B-206ENST00000481109 IGHV6-1A0A0B4J1U7 121 aa6.81□□□□□ -1.32
PRPF4B-206ENST00000481109 CHD8Q9HCK8 2581 aa6.8□□□□□ -1.32
PRPF4B-206ENST00000481109 TRGV4A0A0C4DH28 118 aa6.8□□□□□ -1.32
PRPF4B-206ENST00000481109 C5orf56Q8N8D9 126 aa6.8□□□□□ -1.32
PRPF4B-206ENST00000481109 Q8NDZ9 215 aa6.8□□□□□ -1.32
PRPF4B-206ENST00000481109 NCOR2Q9Y618 2525 aa6.8□□□□□ -1.32
PRPF4B-206ENST00000481109 IGLV7-46A0A075B6I9 117 aa6.79□□□□□ -1.32
PRPF4B-206ENST00000481109 A0A1W2PNM2 257 aa6.79□□□□□ -1.32
PRPF4B-206ENST00000481109 DSCR10P59022 87 aa6.79□□□□□ -1.32
PRPF4B-206ENST00000481109 DOPEY2Q9Y3R5 2298 aa6.78□□□□□ -1.32
PRPF4B-206ENST00000481109 HIVEP3Q5T1R4 2406 aa6.78□□□□□ -1.32
PRPF4B-206ENST00000481109 IGLV5-48A0A075B6I7 105 aa6.77□□□□□ -1.32
PRPF4B-206ENST00000481109 HTN1P15515 57 aa6.77□□□□□ -1.32
PRPF4B-206ENST00000481109 LINC00959A0A1B0GUT2 108 aa6.77□□□□□ -1.33
PRPF4B-206ENST00000481109 A0A1W2PPR1 153 aa6.77□□□□□ -1.33
PRPF4B-206ENST00000481109 A0A0A0MQY5 61 aa6.76□□□□□ -1.33
PRPF4B-206ENST00000481109 ZNF702PQ9H963 129 aa6.75□□□□□ -1.33
PRPF4B-206ENST00000481109 K7EQZ3 153 aa6.75□□□□□ -1.33
PRPF4B-206ENST00000481109 C11orf71Q6IPW1 123 aa6.75□□□□□ -1.33
PRPF4B-206ENST00000481109 SPAG11AQ6PDA7 123 aa6.74□□□□□ -1.33
PRPF4B-206ENST00000481109 IGKV2D-24A0A075B6R9 120 aa6.74□□□□□ -1.33
PRPF4B-206ENST00000481109 IGKV3OR2-268A0A0C4DH90 116 aa6.74□□□□□ -1.33
PRPF4B-206ENST00000481109 H0Y9P7 68 aa6.74□□□□□ -1.33
PRPF4B-206ENST00000481109 CELSR2Q9HCU4 2923 aa6.74□□□□□ -1.33
PRPF4B-206ENST00000481109 KPRPQ5T749 579 aaPredicted RBP6.73□□□□□ -1.33
PRPF4B-206ENST00000481109 SPG11Q96JI7 2443 aa6.72□□□□□ -1.33
PRPF4B-206ENST00000481109 DEFB112Q30KQ8 113 aa6.72□□□□□ -1.33
PRPF4B-206ENST00000481109 NOTCH2NLQ7Z3S9 236 aa6.72□□□□□ -1.33
PRPF4B-206ENST00000481109 ITPR1Q14643 2758 aa6.72□□□□□ -1.33
PRPF4B-206ENST00000481109 CRYBG3Q68DQ2 2970 aa6.72□□□□□ -1.33
PRPF4B-206ENST00000481109 SPRR4Q96PI1 79 aa6.72□□□□□ -1.33
PRPF4B-206ENST00000481109 LINC00528Q8N1L1 170 aa6.71□□□□□ -1.34
PRPF4B-206ENST00000481109 IGLV1-40P01703 118 aa6.69□□□□□ -1.34
PRPF4B-206ENST00000481109 C1orf134Q5TEV5 83 aa6.69□□□□□ -1.34
PRPF4B-206ENST00000481109 CSAG1Q6PB30 78 aa6.69□□□□□ -1.34
PRPF4B-206ENST00000481109 Q8NBF4 154 aa6.69□□□□□ -1.34
PRPF4B-206ENST00000481109 CSMD2Q7Z408 3487 aa6.69□□□□□ -1.34
PRPF4B-206ENST00000481109 DNAJC9-AS1A6NH13 148 aa6.68□□□□□ -1.34
PRPF4B-206ENST00000481109 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.68□□□□□ -1.343e-7■■■■■ 29.9
PRPF4B-206ENST00000481109 UTP20O75691 2785 aaKnown RBP6.68□□□□□ -1.34
PRPF4B-206ENST00000481109 A0A0J9YWU9 116 aa6.68□□□□□ -1.34
PRPF4B-206ENST00000481109 INSP01308 110 aa6.68□□□□□ -1.34
PRPF4B-206ENST00000481109 Q6ZR54 194 aa6.68□□□□□ -1.34
PRPF4B-206ENST00000481109 ABCA2Q9BZC7 2435 aa6.68□□□□□ -1.34
PRPF4B-206ENST00000481109 KRTAP29-1A8MX34 341 aaPredicted RBP6.67□□□□□ -1.34
PRPF4B-206ENST00000481109 ROMO1P60602 79 aa6.67□□□□□ -1.34
PRPF4B-206ENST00000481109 X6R8D5 127 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms