RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM5-210	ENST00000480956	FREM1	Q5H8C1	2179 aa		4.21	□□□□□ -1.74
LSM5-210	ENST00000480956	PKD1L2	Q7Z442	2459 aa		4.21	□□□□□ -1.74
LSM5-210	ENST00000480956	ALPK2	Q86TB3	2170 aa		4.21	□□□□□ -1.74
LSM5-210	ENST00000480956	TPR	P12270	2363 aa	Known RBP	4.21	□□□□□ -1.74
LSM5-210	ENST00000480956		J3QRE1	110 aa		4.21	□□□□□ -1.74
LSM5-210	ENST00000480956	TMEM170B	Q5T4T1	132 aa		4.21	□□□□□ -1.74
LSM5-210	ENST00000480956	ACACB	O00763	2458 aa		4.2	□□□□□ -1.74
LSM5-210	ENST00000480956	USP24	Q9UPU5	2620 aa		4.2	□□□□□ -1.74
LSM5-210	ENST00000480956	TLN1	Q9Y490	2541 aa	Known RBP	4.2	□□□□□ -1.74
LSM5-210	ENST00000480956	TRBV6-5	A0A0K0K1A5	114 aa		4.2	□□□□□ -1.74
LSM5-210	ENST00000480956	LINC00304	Q8N9R0	145 aa		4.2	□□□□□ -1.74
LSM5-210	ENST00000480956	SMIM4	Q8WVI0	70 aa		4.2	□□□□□ -1.74
LSM5-210	ENST00000480956	ZNF815P	A8K554	130 aa		4.19	□□□□□ -1.74
LSM5-210	ENST00000480956	SNRPGP15	A8MWD9	76 aa		4.19	□□□□□ -1.74
LSM5-210	ENST00000480956	FXYD6P3	P58550	94 aa		4.19	□□□□□ -1.74
LSM5-210	ENST00000480956	RPL37A	P61513	92 aa	Known RBP	4.19	□□□□□ -1.74
LSM5-210	ENST00000480956	FAM74A4	Q5TZK3	123 aa		4.19	□□□□□ -1.74
LSM5-210	ENST00000480956	TTTY10	Q9BZA0	68 aa		4.19	□□□□□ -1.74
LSM5-210	ENST00000480956	TMEM14B	Q9NUH8	114 aa		4.19	□□□□□ -1.74
LSM5-210	ENST00000480956	KALRN	O60229	2985 aa		4.19	□□□□□ -1.74
LSM5-210	ENST00000480956	RP1L1	Q8IWN7	2480 aa	Predicted RBP	4.18	□□□□□ -1.74
LSM5-210	ENST00000480956	IGKV3D-7	A0A0C4DH55	119 aa		4.18	□□□□□ -1.74
LSM5-210	ENST00000480956	IGKV3OR2-268	A0A0C4DH90	116 aa		4.18	□□□□□ -1.74
LSM5-210	ENST00000480956	HCP5	Q6MZN7	132 aa		4.18	□□□□□ -1.74
LSM5-210	ENST00000480956	LINC00322	Q6ZN03	302 aa	Predicted RBP	4.18	□□□□□ -1.74
LSM5-210	ENST00000480956	TOMM5	Q8N4H5	51 aa		4.18	□□□□□ -1.74
LSM5-210	ENST00000480956	DOCK11	Q5JSL3	2073 aa		4.18	□□□□□ -1.74
LSM5-210	ENST00000480956	ZFYVE26	Q68DK2	2539 aa		4.18	□□□□□ -1.74
LSM5-210	ENST00000480956	COL6A6	A6NMZ7	2263 aa		4.18	□□□□□ -1.74
LSM5-210	ENST00000480956	IGSF10	Q6WRI0	2623 aa		4.17	□□□□□ -1.74
LSM5-210	ENST00000480956	TRAV1-2	A0A0B4J238	106 aa		4.17	□□□□□ -1.74
LSM5-210	ENST00000480956	PSMG4	Q5JS54	123 aa		4.17	□□□□□ -1.74
LSM5-210	ENST00000480956		Q86TA4	180 aa		4.17	□□□□□ -1.74
LSM5-210	ENST00000480956	SPTA1	P02549	2419 aa		4.17	□□□□□ -1.74
LSM5-210	ENST00000480956	INE1	O15225	51 aa		4.16	□□□□□ -1.74
LSM5-210	ENST00000480956	SAA2	P0DJI9	122 aa	Predicted RBP	4.16	□□□□□ -1.74
LSM5-210	ENST00000480956	RPS27	P42677	84 aa	Known RBP	4.16	□□□□□ -1.74
LSM5-210	ENST00000480956	PPP1R1C	Q8WVI7	109 aa		4.16	□□□□□ -1.74
LSM5-210	ENST00000480956	ABRACL	Q9P1F3	81 aa		4.16	□□□□□ -1.74
LSM5-210	ENST00000480956	ARL2-SNX15	V9GYD0	113 aa		4.16	□□□□□ -1.74
LSM5-210	ENST00000480956	EPG5	Q9HCE0	2579 aa		4.16	□□□□□ -1.74
LSM5-210	ENST00000480956	NBAS	A2RRP1	2371 aa		4.16	□□□□□ -1.74
LSM5-210	ENST00000480956		F8WEM9	126 aa		4.15	□□□□□ -1.74
LSM5-210	ENST00000480956	IGKV1-17	P01599	117 aa		4.15	□□□□□ -1.74
LSM5-210	ENST00000480956	FN1	P02751	2386 aa	Known RBP	4.15	□□□□□ -1.75
LSM5-210	ENST00000480956		H3BSH0	61 aa		4.15	□□□□□ -1.75
LSM5-210	ENST00000480956	CACNA1B	Q00975	2339 aa		4.15	□□□□□ -1.75
LSM5-210	ENST00000480956		R4GMQ9	66 aa		4.15	□□□□□ -1.75
LSM5-210	ENST00000480956	CFAP46	Q8IYW2	2715 aa		4.14	□□□□□ -1.75
LSM5-210	ENST00000480956	ABCA4	P78363	2273 aa		4.14	□□□□□ -1.75
LSM5-210	ENST00000480956	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.14	□□□□□ -1.75
LSM5-210	ENST00000480956	FXYD6-FXYD2	A0A087WZ82	144 aa		4.14	□□□□□ -1.75
LSM5-210	ENST00000480956	NBDY	A0A0U1RRE5	68 aa		4.14	□□□□□ -1.75
LSM5-210	ENST00000480956	IGKV2D-40	P01614	121 aa	Predicted RBP	4.14	□□□□□ -1.75
LSM5-210	ENST00000480956	PRB1	P04280	392 aa		4.14	□□□□□ -1.75
LSM5-210	ENST00000480956	FXYD6	Q9H0Q3	95 aa		4.14	□□□□□ -1.75
LSM5-210	ENST00000480956	CACNA1C	Q13936	2221 aa		4.14	□□□□□ -1.75
LSM5-210	ENST00000480956	INTS1	Q8N201	2190 aa	Known RBP	4.13	□□□□□ -1.75
LSM5-210	ENST00000480956		M0R2N4	97 aa		4.13	□□□□□ -1.75
LSM5-210	ENST00000480956	CMC2	Q9NRP2	79 aa		4.13	□□□□□ -1.75
LSM5-210	ENST00000480956	COL12A1	Q99715	3063 aa		4.13	□□□□□ -1.75
LSM5-210	ENST00000480956	PCNX1	Q96RV3	2341 aa		4.13	□□□□□ -1.75
LSM5-210	ENST00000480956	SMIM13	P0DJ93	91 aa		4.12	□□□□□ -1.75
LSM5-210	ENST00000480956	FXYD3	Q14802	87 aa		4.12	□□□□□ -1.75
LSM5-210	ENST00000480956		V9GYV3	84 aa		4.12	□□□□□ -1.75
LSM5-210	ENST00000480956	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.12	□□□□□ -1.75
LSM5-210	ENST00000480956		Q6ZRN7	208 aa	Predicted RBP	4.12	□□□□□ -1.75
LSM5-210	ENST00000480956	AMELX	Q99217	191 aa		4.12	□□□□□ -1.75
LSM5-210	ENST00000480956	UTP20	O75691	2785 aa	Known RBP	4.12	□□□□□ -1.75
LSM5-210	ENST00000480956	MYO7B	Q6PIF6	2116 aa		4.11	□□□□□ -1.75
LSM5-210	ENST00000480956	ADGRG4	Q8IZF6	3080 aa		4.11	□□□□□ -1.75
LSM5-210	ENST00000480956	FXYD4	P59646	89 aa		4.11	□□□□□ -1.75
LSM5-210	ENST00000480956	KRTAP10-7	P60409	375 aa	Predicted RBP	4.11	□□□□□ -1.75
LSM5-210	ENST00000480956	ZNF625	Q96I27	306 aa	Predicted RBP	4.11	□□□□□ -1.75
LSM5-210	ENST00000480956	NCOA6	Q14686	2063 aa	Predicted RBP	4.11	□□□□□ -1.75
LSM5-210	ENST00000480956	LOC110117498	A0A087WWA1	95 aa		4.1	□□□□□ -1.75
LSM5-210	ENST00000480956	PIN1P1	O15428	100 aa		4.1	□□□□□ -1.75
LSM5-210	ENST00000480956	MRPL33	O75394	65 aa	Known RBP	4.1	□□□□□ -1.75
LSM5-210	ENST00000480956	LINC01590	Q5TEZ4	76 aa		4.1	□□□□□ -1.75
LSM5-210	ENST00000480956	IQCF6	A8MYZ5	107 aa		4.09	□□□□□ -1.75
LSM5-210	ENST00000480956	CCL18	P55774	89 aa		4.09	□□□□□ -1.75
LSM5-210	ENST00000480956	PSENEN	Q9NZ42	101 aa		4.09	□□□□□ -1.75
LSM5-210	ENST00000480956	FLNC	Q14315	2725 aa		4.09	□□□□□ -1.75
LSM5-210	ENST00000480956	CHD6	Q8TD26	2715 aa		4.09	□□□□□ -1.76
LSM5-210	ENST00000480956	FAM223B	A6NKX1	122 aa		4.09	□□□□□ -1.76
LSM5-210	ENST00000480956		F8VRH5	84 aa		4.09	□□□□□ -1.76
LSM5-210	ENST00000480956	SNURF	Q9Y675	71 aa		4.09	□□□□□ -1.76
LSM5-210	ENST00000480956	ZNF462	Q96JM2	2506 aa		4.09	□□□□□ -1.76
LSM5-210	ENST00000480956	HIVEP3	Q5T1R4	2406 aa		4.08	□□□□□ -1.76
LSM5-210	ENST00000480956	C5orf56	Q8N8D9	126 aa		4.08	□□□□□ -1.76
LSM5-210	ENST00000480956	KMT2B	Q9UMN6	2715 aa	Predicted RBP	4.08	□□□□□ -1.76
LSM5-210	ENST00000480956	LRBA	P50851	2863 aa		4.07	□□□□□ -1.76
LSM5-210	ENST00000480956	MYO18B	Q8IUG5	2567 aa		4.07	□□□□□ -1.76
LSM5-210	ENST00000480956	SFTA3	P0C7M3	94 aa		4.07	□□□□□ -1.76
LSM5-210	ENST00000480956	MYMX	A0A1B0GTQ4	84 aa		4.07	□□□□□ -1.76
LSM5-210	ENST00000480956	HRNR	Q86YZ3	2850 aa	Predicted RBP	4.06	□□□□□ -1.76
LSM5-210	ENST00000480956	KRTAP5-11	Q6L8G4	156 aa		4.06	□□□□□ -1.76
LSM5-210	ENST00000480956	SPTBN1	Q01082	2364 aa	Known RBP	4.06	□□□□□ -1.76
LSM5-210	ENST00000480956	TENM4	Q6N022	2769 aa		4.05	□□□□□ -1.76
LSM5-210	ENST00000480956	C7orf77	A4D0Y5	90 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms