RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.25□□□□□ -1.73
PRPF4B-205ENST00000480058 FAM218AQ96MZ4 157 aa4.25□□□□□ -1.73
PRPF4B-205ENST00000480058 WDR87Q6ZQQ6 2873 aa4.25□□□□□ -1.73
PRPF4B-205ENST00000480058 Q6ZTC4 211 aa4.25□□□□□ -1.73
PRPF4B-205ENST00000480058 WIPF1O43516 503 aa4.25□□□□□ -1.73
PRPF4B-205ENST00000480058 STAB1Q9NY15 2570 aa4.25□□□□□ -1.73
PRPF4B-205ENST00000480058 IGLV6-57P01721 117 aa4.24□□□□□ -1.73
PRPF4B-205ENST00000480058 EML5Q05BV3 1969 aa4.24□□□□□ -1.73
PRPF4B-205ENST00000480058 C22orf24Q9Y442 160 aa4.24□□□□□ -1.73
PRPF4B-205ENST00000480058 SMCR5Q8TEV8 140 aa4.24□□□□□ -1.73
PRPF4B-205ENST00000480058 KIF26AQ9ULI4 1882 aaPredicted RBP4.24□□□□□ -1.73
PRPF4B-205ENST00000480058 KIAA0087Q14695 138 aa4.23□□□□□ -1.73
PRPF4B-205ENST00000480058 FAM229AH3BQW9 127 aa4.23□□□□□ -1.73
PRPF4B-205ENST00000480058 PRM2P04554 102 aa4.23□□□□□ -1.73
PRPF4B-205ENST00000480058 ATP11AUNQ6ZP68 121 aa4.23□□□□□ -1.73
PRPF4B-205ENST00000480058 C18orf65Q6ZTR6 163 aa4.23□□□□□ -1.73
PRPF4B-205ENST00000480058 INAFM1C9JVW0 142 aa4.23□□□□□ -1.73
PRPF4B-205ENST00000480058 C8orf87E5RJ46 101 aa4.23□□□□□ -1.73
PRPF4B-205ENST00000480058 Q6ZRP5 223 aa4.23□□□□□ -1.73
PRPF4B-205ENST00000480058 C6orf48Q9UBA6 75 aa4.23□□□□□ -1.73
PRPF4B-205ENST00000480058 FSHBP01225 129 aa4.22□□□□□ -1.73
PRPF4B-205ENST00000480058 COL5A1P20908 1838 aaPredicted RBP4.22□□□□□ -1.73
PRPF4B-205ENST00000480058 SMIM29Q86T20 159 aa4.22□□□□□ -1.73
PRPF4B-205ENST00000480058 LINC00528Q8N1L1 170 aa4.22□□□□□ -1.73
PRPF4B-205ENST00000480058 LRP4O75096 1905 aa4.22□□□□□ -1.73
PRPF4B-205ENST00000480058 IGHV6-1A0A0B4J1U7 121 aa4.22□□□□□ -1.73
PRPF4B-205ENST00000480058 LINC00167Q96N53 147 aa4.22□□□□□ -1.73
PRPF4B-205ENST00000480058 RETNQ9HD89 108 aa4.22□□□□□ -1.73
PRPF4B-205ENST00000480058 CD164Q04900 197 aa4.22□□□□□ -1.73
PRPF4B-205ENST00000480058 KCNQ1DNQ9H478 68 aa4.22□□□□□ -1.73
PRPF4B-205ENST00000480058 A0A1B0GU69 56 aa4.21□□□□□ -1.74
PRPF4B-205ENST00000480058 IGLV9-49A0A0B4J1Y8 123 aa4.21□□□□□ -1.74
PRPF4B-205ENST00000480058 CDSNQ15517 529 aa4.21□□□□□ -1.74
PRPF4B-205ENST00000480058 SPANXA2-OT1Q8N9U9 137 aa4.21□□□□□ -1.74
PRPF4B-205ENST00000480058 PCOTHQ58A44 107 aa4.2□□□□□ -1.74
PRPF4B-205ENST00000480058 X6R8D5 127 aa4.2□□□□□ -1.74
PRPF4B-205ENST00000480058 KIAA1549LQ6ZVL6 1849 aa4.2□□□□□ -1.74
PRPF4B-205ENST00000480058 PRR34Q9NV39 138 aa4.2□□□□□ -1.74
PRPF4B-205ENST00000480058 NANOS2P60321 138 aaKnown RBP4.2□□□□□ -1.74
PRPF4B-205ENST00000480058 LRCOL1A6NCL2 159 aa4.2□□□□□ -1.74
PRPF4B-205ENST00000480058 H7BZZ5 65 aa4.2□□□□□ -1.74
PRPF4B-205ENST00000480058 EDN2P20800 178 aa4.2□□□□□ -1.74
PRPF4B-205ENST00000480058 TM2D3Q9BRN9 247 aa4.2□□□□□ -1.74
PRPF4B-205ENST00000480058 RETNLBQ9BQ08 111 aa4.19□□□□□ -1.74
PRPF4B-205ENST00000480058 ADAMTS20P59510 1910 aa4.19□□□□□ -1.74
PRPF4B-205ENST00000480058 LINC00612Q8N6U2 182 aa4.19□□□□□ -1.74
PRPF4B-205ENST00000480058 A8MWP4 228 aa4.19□□□□□ -1.74
PRPF4B-205ENST00000480058 C4orf26Q17RF5 130 aa4.19□□□□□ -1.74
PRPF4B-205ENST00000480058 LINC00476Q8WZB0 136 aa4.19□□□□□ -1.74
PRPF4B-205ENST00000480058 ANKRD17O75179 2603 aaKnown RBP4.18□□□□□ -1.74
PRPF4B-205ENST00000480058 SPAG11AQ6PDA7 123 aa4.18□□□□□ -1.74
PRPF4B-205ENST00000480058 OBSCN-AS1Q96MR7 158 aa4.18□□□□□ -1.74
PRPF4B-205ENST00000480058 PLA2G2DQ9UNK4 145 aa4.18□□□□□ -1.74
PRPF4B-205ENST00000480058 UQCR11O14957 56 aa4.18□□□□□ -1.74
PRPF4B-205ENST00000480058 OXLD1Q5BKU9 147 aa4.17□□□□□ -1.74
PRPF4B-205ENST00000480058 HECTD1Q9ULT8 2610 aa4.17□□□□□ -1.74
PRPF4B-205ENST00000480058 CPAMD8Q8IZJ3 1885 aa4.17□□□□□ -1.74
PRPF4B-205ENST00000480058 C16orf90A8MZG2 172 aa4.17□□□□□ -1.74
PRPF4B-205ENST00000480058 SSBP3-AS1Q7Z2R9 100 aa4.17□□□□□ -1.74
PRPF4B-205ENST00000480058 TLX1NBP0CAT3 122 aa4.16□□□□□ -1.74
PRPF4B-205ENST00000480058 DNAH10OSP0CZ25 163 aa4.16□□□□□ -1.74
PRPF4B-205ENST00000480058 PRR15Q8IV56 129 aa4.16□□□□□ -1.74
PRPF4B-205ENST00000480058 PRLHP81277 87 aa4.16□□□□□ -1.74
PRPF4B-205ENST00000480058 IGLV5-48A0A075B6I7 105 aa4.15□□□□□ -1.75
PRPF4B-205ENST00000480058 MRPL34Q9BQ48 92 aaKnown RBP4.14□□□□□ -1.75
PRPF4B-205ENST00000480058 LINC00336Q6ZUF6 198 aa4.14□□□□□ -1.75
PRPF4B-205ENST00000480058 CIRBP-AS1Q8TBR5 109 aa4.14□□□□□ -1.75
PRPF4B-205ENST00000480058 C7orf65Q6ZTY9 151 aa4.14□□□□□ -1.75
PRPF4B-205ENST00000480058 Q8NAQ8 132 aa4.14□□□□□ -1.75
PRPF4B-205ENST00000480058 IGLV5-52A0A0A0MRZ9 124 aa4.13□□□□□ -1.75
PRPF4B-205ENST00000480058 A8MUN3 132 aa4.13□□□□□ -1.75
PRPF4B-205ENST00000480058 PLA2G2AP14555 144 aa4.13□□□□□ -1.75
PRPF4B-205ENST00000480058 C1orf134Q5TEV5 83 aa4.13□□□□□ -1.75
PRPF4B-205ENST00000480058 Q9UF83 564 aa4.13□□□□□ -1.75
PRPF4B-205ENST00000480058 IGLV1-50A0A075B6I6 118 aa4.13□□□□□ -1.75
PRPF4B-205ENST00000480058 KRTAP10-9P60411 292 aa4.12□□□□□ -1.75
PRPF4B-205ENST00000480058 SERTAD4-AS1Q5TG53 156 aa4.12□□□□□ -1.75
PRPF4B-205ENST00000480058 LCA10Q71F78 164 aa4.12□□□□□ -1.75
PRPF4B-205ENST00000480058 NBEAL1Q6ZS30 2694 aa4.12□□□□□ -1.75
PRPF4B-205ENST00000480058 COA5Q86WW8 74 aa4.12□□□□□ -1.75
PRPF4B-205ENST00000480058 KTN1-AS1Q86SY8 53 aa4.11□□□□□ -1.75
PRPF4B-205ENST00000480058 CSNK1G2-AS1Q8NCQ2 148 aa4.11□□□□□ -1.75
PRPF4B-205ENST00000480058 EPM2AB3EWF7 344 aa4.1□□□□□ -1.75
PRPF4B-205ENST00000480058 EIF4EBP3O60516 100 aaPredicted RBP4.1□□□□□ -1.75
PRPF4B-205ENST00000480058 IGLV5-37A0A075B6J1 123 aa4.1□□□□□ -1.75
PRPF4B-205ENST00000480058 IGKV2D-30A0A075B6S6 120 aa4.1□□□□□ -1.75
PRPF4B-205ENST00000480058 IGKV2-30P06310 120 aa4.1□□□□□ -1.75
PRPF4B-205ENST00000480058 PTPRSQ13332 1948 aa4.09□□□□□ -1.75
PRPF4B-205ENST00000480058 Q1T7F1 81 aa4.09□□□□□ -1.75
PRPF4B-205ENST00000480058 C8orf17Q9NRJ1 99 aa4.09□□□□□ -1.75
PRPF4B-205ENST00000480058 K7EQZ3 153 aa4.09□□□□□ -1.75
PRPF4B-205ENST00000480058 DEFB116Q30KQ4 102 aa4.09□□□□□ -1.75
PRPF4B-205ENST00000480058 TET2Q6N021 2002 aaPredicted RBP4.09□□□□□ -1.75
PRPF4B-205ENST00000480058 LINC00313P59037 77 aa4.09□□□□□ -1.76
PRPF4B-205ENST00000480058 OCR1Q9BZK8 76 aa4.09□□□□□ -1.76
PRPF4B-205ENST00000480058 CDC42SE1Q9NRR8 79 aa4.09□□□□□ -1.76
PRPF4B-205ENST00000480058 Q8N377 158 aa4.08□□□□□ -1.76
PRPF4B-205ENST00000480058 ST20-AS1Q8NBB2 130 aa4.08□□□□□ -1.76
PRPF4B-205ENST00000480058 CEP192Q8TEP8 1941 aa4.08□□□□□ -1.76
PRPF4B-205ENST00000480058 C19orf73Q9NVV2 129 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms