RNA–Protein interactions for RNA: ENST00000479896.1

PTPRE-208, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 5,736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-208ENST00000479896 CACNA1AO00555 2505 aa8.51□□□□□ -1.05
PTPRE-208ENST00000479896 BCE1O60756 84 aa8.5□□□□□ -1.05
PTPRE-208ENST00000479896 LINC00476Q8WZB0 136 aa8.5□□□□□ -1.05
PTPRE-208ENST00000479896 Q8NAQ8 132 aa8.49□□□□□ -1.05
PTPRE-208ENST00000479896 Q96NJ1 140 aa8.49□□□□□ -1.05
PTPRE-208ENST00000479896 CPAMD8Q8IZJ3 1885 aa8.49□□□□□ -1.05
PTPRE-208ENST00000479896 GVQW2A0A096LPI5 108 aaPredicted RBP8.49□□□□□ -1.05
PTPRE-208ENST00000479896 Q9UF83 564 aa8.49□□□□□ -1.05
PTPRE-208ENST00000479896 ARHGAP32A7KAX9 2087 aa8.49□□□□□ -1.05
PTPRE-208ENST00000479896 TET2Q6N021 2002 aaPredicted RBP8.47□□□□□ -1.05
PTPRE-208ENST00000479896 IGLV5-45A0A087WSX0 123 aa8.47□□□□□ -1.05
PTPRE-208ENST00000479896 H3BPC8 53 aa8.47□□□□□ -1.05
PTPRE-208ENST00000479896 COX6B2Q6YFQ2 88 aa8.47□□□□□ -1.05
PTPRE-208ENST00000479896 PLXNB1O43157 2135 aa8.45□□□□□ -1.06
PTPRE-208ENST00000479896 C8orf87E5RJ46 101 aa8.45□□□□□ -1.06
PTPRE-208ENST00000479896 CCDC168Q8NDH2 2452 aa8.44□□□□□ -1.06
PTPRE-208ENST00000479896 COL4A2P08572 1712 aa8.44□□□□□ -1.06
PTPRE-208ENST00000479896 DNAH10OSP0CZ25 163 aa8.43□□□□□ -1.06
PTPRE-208ENST00000479896 EML5Q05BV3 1969 aa8.43□□□□□ -1.06
PTPRE-208ENST00000479896 TRAV22A0A0B4J277 110 aa8.43□□□□□ -1.06
PTPRE-208ENST00000479896 ST20-AS1Q8NBB2 130 aa8.42□□□□□ -1.06
PTPRE-208ENST00000479896 LOC110117498A0A087WWA1 95 aa8.41□□□□□ -1.06
PTPRE-208ENST00000479896 SPAG11AQ6PDA7 123 aa8.41□□□□□ -1.06
PTPRE-208ENST00000479896 NCOR2Q9Y618 2525 aa8.41□□□□□ -1.06
PTPRE-208ENST00000479896 AGRNO00468 2067 aa8.4□□□□□ -1.06
PTPRE-208ENST00000479896 Q6ZQT0 140 aa8.4□□□□□ -1.06
PTPRE-208ENST00000479896 LOC101927531A0A1B0GV80 90 aa8.39□□□□□ -1.07
PTPRE-208ENST00000479896 ABCA2Q9BZC7 2435 aa8.38□□□□□ -1.07
PTPRE-208ENST00000479896 FAM218AQ96MZ4 157 aa8.37□□□□□ -1.07
PTPRE-208ENST00000479896 TRBV7-4A0A0J9YYF1 115 aa8.36□□□□□ -1.07
PTPRE-208ENST00000479896 LINC00304Q8N9R0 145 aa8.35□□□□□ -1.07
PTPRE-208ENST00000479896 IGF2RP11717 2491 aa8.35□□□□□ -1.07
PTPRE-208ENST00000479896 A8MWP4 228 aa8.35□□□□□ -1.07
PTPRE-208ENST00000479896 EP400Q96L91 3159 aa8.34□□□□□ -1.07
PTPRE-208ENST00000479896 K7EIL1 84 aa8.34□□□□□ -1.07
PTPRE-208ENST00000479896 FAM168BA1KXE4 195 aa8.34□□□□□ -1.07
PTPRE-208ENST00000479896 MRPL34Q9BQ48 92 aaKnown RBP8.33□□□□□ -1.08
PTPRE-208ENST00000479896 CDIP1Q9H305 208 aa8.33□□□□□ -1.08
PTPRE-208ENST00000479896 VPREB1P12018 145 aa8.32□□□□□ -1.08
PTPRE-208ENST00000479896 PIEZO1Q92508 2521 aa8.32□□□□□ -1.08
PTPRE-208ENST00000479896 MYO18BQ8IUG5 2567 aa8.32□□□□□ -1.08
PTPRE-208ENST00000479896 KRTAP10-11P60412 298 aa8.32□□□□□ -1.08
PTPRE-208ENST00000479896 IGLV1-50A0A075B6I6 118 aa8.32□□□□□ -1.08
PTPRE-208ENST00000479896 IGLV8-61A0A075B6I0 122 aa8.31□□□□□ -1.08
PTPRE-208ENST00000479896 IGLV6-57P01721 117 aa8.3□□□□□ -1.08
PTPRE-208ENST00000479896 LINC00336Q6ZUF6 198 aa8.3□□□□□ -1.08
PTPRE-208ENST00000479896 SERTAD4-AS1Q5TG53 156 aa8.29□□□□□ -1.08
PTPRE-208ENST00000479896 C19orf73Q9NVV2 129 aa8.28□□□□□ -1.08
PTPRE-208ENST00000479896 KLK9Q2XQG4 91 aa8.28□□□□□ -1.08
PTPRE-208ENST00000479896 SSBP3-AS1Q7Z2R9 100 aa8.28□□□□□ -1.08
PTPRE-208ENST00000479896 PTPRBP23467 1997 aa8.28□□□□□ -1.08
PTPRE-208ENST00000479896 ZNF861PO60384 105 aa8.27□□□□□ -1.09
PTPRE-208ENST00000479896 DSCR10P59022 87 aa8.27□□□□□ -1.09
PTPRE-208ENST00000479896 KCNQ1DNQ9H478 68 aa8.27□□□□□ -1.09
PTPRE-208ENST00000479896 A0A087WTM6 91 aa8.26□□□□□ -1.09
PTPRE-208ENST00000479896 SPINT4Q6UDR6 99 aa8.26□□□□□ -1.09
PTPRE-208ENST00000479896 C9orf92A6NGG3 77 aa8.25□□□□□ -1.09
PTPRE-208ENST00000479896 CSNK1G2-AS1Q8NCQ2 148 aa8.25□□□□□ -1.09
PTPRE-208ENST00000479896 COL27A1Q8IZC6 1860 aaPredicted RBP8.25□□□□□ -1.09
PTPRE-208ENST00000479896 C2CD3Q4AC94 2353 aa8.24□□□□□ -1.09
PTPRE-208ENST00000479896 RBM12B-AS1Q9P1G2 102 aa8.24□□□□□ -1.09
PTPRE-208ENST00000479896 OBSCN-AS1Q96MR7 158 aa8.24□□□□□ -1.09
PTPRE-208ENST00000479896 SMCPP49901 116 aaPredicted RBP8.23□□□□□ -1.09
PTPRE-208ENST00000479896 TM2D3Q9BRN9 247 aa8.23□□□□□ -1.09
PTPRE-208ENST00000479896 DOPEY1Q5JWR5 2465 aa8.23□□□□□ -1.09
PTPRE-208ENST00000479896 K7EQZ3 153 aa8.23□□□□□ -1.09
PTPRE-208ENST00000479896 SMR3BP02814 79 aaPredicted RBP8.23□□□□□ -1.09
PTPRE-208ENST00000479896 LINC01600Q96MT4 127 aa8.23□□□□□ -1.09
PTPRE-208ENST00000479896 PRO0628Q9UI54 55 aa8.22□□□□□ -1.09
PTPRE-208ENST00000479896 APLNQ9ULZ1 77 aa8.22□□□□□ -1.09
PTPRE-208ENST00000479896 C8orf17Q9NRJ1 99 aa8.22□□□□□ -1.09
PTPRE-208ENST00000479896 PIEZO2Q9H5I5 2752 aa8.22□□□□□ -1.09
PTPRE-208ENST00000479896 IGFL1Q6UW32 110 aa8.21□□□□□ -1.09
PTPRE-208ENST00000479896 IGLV5-37A0A075B6J1 123 aa8.2□□□□□ -1.1
PTPRE-208ENST00000479896 C15orf56Q8N910 161 aa8.2□□□□□ -1.1
PTPRE-208ENST00000479896 A0A1B0GVX0 72 aa8.19□□□□□ -1.1
PTPRE-208ENST00000479896 LRRK2Q5S007 2527 aa8.19□□□□□ -1.1
PTPRE-208ENST00000479896 COA5Q86WW8 74 aa8.19□□□□□ -1.1
PTPRE-208ENST00000479896 LINC00528Q8N1L1 170 aa8.19□□□□□ -1.1
PTPRE-208ENST00000479896 PRR34Q9NV39 138 aa8.19□□□□□ -1.1
PTPRE-208ENST00000479896 IGLV7-43P04211 117 aa8.18□□□□□ -1.1
PTPRE-208ENST00000479896 LITAFQ99732 161 aa8.18□□□□□ -1.1
PTPRE-208ENST00000479896 C9orf163Q8N9P6 203 aa8.17□□□□□ -1.1
PTPRE-208ENST00000479896 PRO0461Q9UI25 63 aa8.17□□□□□ -1.1
PTPRE-208ENST00000479896 PLA2G2DQ9UNK4 145 aa8.17□□□□□ -1.1
PTPRE-208ENST00000479896 CRIPTQ9P021 101 aa8.17□□□□□ -1.1
PTPRE-208ENST00000479896 UQCR11O14957 56 aa8.16□□□□□ -1.1
PTPRE-208ENST00000479896 KRTAP10-3P60369 221 aa8.16□□□□□ -1.1
PTPRE-208ENST00000479896 PRR15Q8IV56 129 aa8.16□□□□□ -1.1
PTPRE-208ENST00000479896 ERC2-IT1O76042 136 aa8.16□□□□□ -1.1
PTPRE-208ENST00000479896 TLX1NBP0CAT3 122 aa8.16□□□□□ -1.1
PTPRE-208ENST00000479896 C9orf129Q5T035 196 aaKnown RBP8.15□□□□□ -1.1
PTPRE-208ENST00000479896 JMJD1CQ15652 2540 aa8.15□□□□□ -1.1
PTPRE-208ENST00000479896 RPS28P62857 69 aaKnown RBP8.14□□□□□ -1.11
PTPRE-208ENST00000479896 A0A096LNT2 108 aa8.12□□□□□ -1.11
PTPRE-208ENST00000479896 LINC00612Q8N6U2 182 aa8.12□□□□□ -1.11
PTPRE-208ENST00000479896 ZNF575Q86XF7 245 aa8.11□□□□□ -1.11
PTPRE-208ENST00000479896 CYP4F30PQ9H0H9 118 aa8.11□□□□□ -1.11
PTPRE-208ENST00000479896 PSORS1C2Q9UIG4 136 aa8.11□□□□□ -1.11
PTPRE-208ENST00000479896 C4orf26Q17RF5 130 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms