RNA–Protein interactions for RNA: ENST00000479853.1

SDHAF3-203, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

TSL 2

Gene SDHAF3, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-203ENST00000479853 QSER1Q2KHR3 1735 aa0.74□□□□□ -2.29
SDHAF3-203ENST00000479853 BDP1A6H8Y1 2624 aa0.74□□□□□ -2.29
SDHAF3-203ENST00000479853 POLQO75417 2590 aa0.74□□□□□ -2.29
SDHAF3-203ENST00000479853 MAGI3Q5TCQ9 1506 aa0.74□□□□□ -2.29
SDHAF3-203ENST00000479853 IQGAP3Q86VI3 1631 aa0.73□□□□□ -2.29
SDHAF3-203ENST00000479853 ABCA12Q86UK0 2595 aa0.73□□□□□ -2.29
SDHAF3-203ENST00000479853 POLR1AO95602 1720 aaPredicted RBP0.72□□□□□ -2.29
SDHAF3-203ENST00000479853 DNMBPQ6XZF7 1577 aa0.72□□□□□ -2.29
SDHAF3-203ENST00000479853 FXYD6-FXYD2A0A087WZ82 144 aa0.72□□□□□ -2.29
SDHAF3-203ENST00000479853 TRAV21A0A0B4J279 112 aa0.72□□□□□ -2.29
SDHAF3-203ENST00000479853 Q5VSD8 79 aa0.72□□□□□ -2.29
SDHAF3-203ENST00000479853 CRIPTQ9P021 101 aa0.72□□□□□ -2.29
SDHAF3-203ENST00000479853 TENM3Q9P273 2699 aa0.72□□□□□ -2.29
SDHAF3-203ENST00000479853 CD163L1Q9NR16 1453 aa0.72□□□□□ -2.29
SDHAF3-203ENST00000479853 RGPD8O14715 1765 aaPredicted RBP0.71□□□□□ -2.3
SDHAF3-203ENST00000479853 RGPD5Q99666 1765 aa0.71□□□□□ -2.3
SDHAF3-203ENST00000479853 MYO5CQ9NQX4 1742 aa0.71□□□□□ -2.3
SDHAF3-203ENST00000479853 CCDC141Q6ZP82 1450 aa0.71□□□□□ -2.3
SDHAF3-203ENST00000479853 FMN2Q9NZ56 1722 aa0.7□□□□□ -2.3
SDHAF3-203ENST00000479853 SPINK1P00995 79 aa0.7□□□□□ -2.3
SDHAF3-203ENST00000479853 COX6B1P14854 86 aa0.7□□□□□ -2.3
SDHAF3-203ENST00000479853 COX7BP24311 80 aa0.7□□□□□ -2.3
SDHAF3-203ENST00000479853 KIF20BQ96Q89 1820 aa0.7□□□□□ -2.3
SDHAF3-203ENST00000479853 TPRP12270 2363 aaKnown RBP0.7□□□□□ -2.3
SDHAF3-203ENST00000479853 UGGT2Q9NYU1 1516 aa0.69□□□□□ -2.3
SDHAF3-203ENST00000479853 CFDP00746 253 aaPredicted RBP0.69□□□□□ -2.3
SDHAF3-203ENST00000479853 SPRR1AP35321 89 aa0.69□□□□□ -2.3
SDHAF3-203ENST00000479853 ATP5EP2Q5VTU8 51 aa0.69□□□□□ -2.3
SDHAF3-203ENST00000479853 USMG5Q96IX5 58 aa0.69□□□□□ -2.3
SDHAF3-203ENST00000479853 GAFA1Q96PS6 74 aa0.69□□□□□ -2.3
SDHAF3-203ENST00000479853 SCN11AQ9UI33 1791 aa0.68□□□□□ -2.3
SDHAF3-203ENST00000479853 GOLGA4Q13439 2230 aaKnown RBP0.68□□□□□ -2.3
SDHAF3-203ENST00000479853 DOT1LQ8TEK3 1739 aa0.68□□□□□ -2.3
SDHAF3-203ENST00000479853 PIEZO1Q92508 2521 aa0.68□□□□□ -2.3
SDHAF3-203ENST00000479853 C2CD3Q4AC94 2353 aa0.67□□□□□ -2.3
SDHAF3-203ENST00000479853 SPRR1BP22528 89 aa0.67□□□□□ -2.3
SDHAF3-203ENST00000479853 PIEZO2Q9H5I5 2752 aa0.66□□□□□ -2.3
SDHAF3-203ENST00000479853 ARFGEF2Q9Y6D5 1785 aa0.66□□□□□ -2.3
SDHAF3-203ENST00000479853 SPTBN2O15020 2390 aa0.66□□□□□ -2.3
SDHAF3-203ENST00000479853 SPTY2D1-AS1A0A0U1RR47 76 aa0.66□□□□□ -2.3
SDHAF3-203ENST00000479853 IFI6P09912 130 aa0.66□□□□□ -2.3
SDHAF3-203ENST00000479853 SMIM13P0DJ93 91 aa0.66□□□□□ -2.3
SDHAF3-203ENST00000479853 WFDC9Q8NEX5 89 aa0.66□□□□□ -2.3
SDHAF3-203ENST00000479853 SMCO4Q9NRQ5 59 aa0.66□□□□□ -2.3
SDHAF3-203ENST00000479853 CELSR2Q9HCU4 2923 aa0.66□□□□□ -2.3
SDHAF3-203ENST00000479853 F8P00451 2351 aa0.65□□□□□ -2.3
SDHAF3-203ENST00000479853 PREX1Q8TCU6 1659 aa0.65□□□□□ -2.3
SDHAF3-203ENST00000479853 LCE6AA0A183 80 aa0.65□□□□□ -2.31
SDHAF3-203ENST00000479853 NDUFB1O75438 58 aa0.65□□□□□ -2.31
SDHAF3-203ENST00000479853 HMGA1P17096 107 aaKnown RBP0.65□□□□□ -2.31
SDHAF3-203ENST00000479853 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.31
SDHAF3-203ENST00000479853 ADAMTS12P58397 1594 aa0.65□□□□□ -2.31
SDHAF3-203ENST00000479853 AHNAKQ09666 5890 aaKnown RBP0.64□□□□□ -2.31
SDHAF3-203ENST00000479853 CSMD3Q7Z407 3707 aa0.64□□□□□ -2.31
SDHAF3-203ENST00000479853 CPSF4LA6NMK7 179 aaKnown RBP0.64□□□□□ -2.31
SDHAF3-203ENST00000479853 COX8AP10176 69 aa0.64□□□□□ -2.31
SDHAF3-203ENST00000479853 IFI27P40305 119 aaPredicted RBP0.64□□□□□ -2.31
SDHAF3-203ENST00000479853 MRPL34Q9BQ48 92 aaKnown RBP0.64□□□□□ -2.31
SDHAF3-203ENST00000479853 PLCE1Q9P212 2302 aa0.64□□□□□ -2.31
SDHAF3-203ENST00000479853 USF3Q68DE3 2245 aa0.64□□□□□ -2.31
SDHAF3-203ENST00000479853 TSC2P49815 1807 aa0.64□□□□□ -2.31
SDHAF3-203ENST00000479853 URB1O60287 2271 aaKnown RBP0.63□□□□□ -2.31
SDHAF3-203ENST00000479853 COL14A1Q05707 1796 aaKnown RBP0.63□□□□□ -2.31
SDHAF3-203ENST00000479853 CFAP43Q8NDM7 1665 aa0.63□□□□□ -2.31
SDHAF3-203ENST00000479853 I3L3M4 83 aa0.63□□□□□ -2.31
SDHAF3-203ENST00000479853 EIF2AK4Q9P2K8 1649 aaKnown RBP0.63□□□□□ -2.31
SDHAF3-203ENST00000479853 TIAM2Q8IVF5 1701 aa0.62□□□□□ -2.31
SDHAF3-203ENST00000479853 NWD1Q149M9 1564 aa0.62□□□□□ -2.31
SDHAF3-203ENST00000479853 MUC5BQ9HC84 5762 aaPredicted RBP0.61□□□□□ -2.31
SDHAF3-203ENST00000479853 BCORQ6W2J9 1755 aa0.61□□□□□ -2.31
SDHAF3-203ENST00000479853 A0A087WXM4 84 aa0.61□□□□□ -2.31
SDHAF3-203ENST00000479853 UMAD1C9J7I0 102 aa0.61□□□□□ -2.31
SDHAF3-203ENST00000479853 DEFA5Q01523 94 aa0.61□□□□□ -2.31
SDHAF3-203ENST00000479853 UBR3Q6ZT12 1888 aa0.61□□□□□ -2.31
SDHAF3-203ENST00000479853 CHD9Q3L8U1 2897 aa0.6□□□□□ -2.31
SDHAF3-203ENST00000479853 DUOX2Q9NRD8 1548 aa0.6□□□□□ -2.31
SDHAF3-203ENST00000479853 ZC3H13Q5T200 1668 aaKnown RBP0.6□□□□□ -2.31
SDHAF3-203ENST00000479853 PDCD5O14737 125 aa0.6□□□□□ -2.31
SDHAF3-203ENST00000479853 NREPQ16612 68 aa0.6□□□□□ -2.31
SDHAF3-203ENST00000479853 DEFB105AQ8NG35 78 aa0.6□□□□□ -2.31
SDHAF3-203ENST00000479853 CLIP1P30622 1438 aa0.6□□□□□ -2.31
SDHAF3-203ENST00000479853 PARP4Q9UKK3 1724 aaKnown RBP0.6□□□□□ -2.31
SDHAF3-203ENST00000479853 ITSN1Q15811 1721 aa0.59□□□□□ -2.31
SDHAF3-203ENST00000479853 CDC42BPGQ6DT37 1551 aa0.59□□□□□ -2.31
SDHAF3-203ENST00000479853 LELP1Q5T871 98 aa0.59□□□□□ -2.31
SDHAF3-203ENST00000479853 U3KQA8 63 aa0.59□□□□□ -2.31
SDHAF3-203ENST00000479853 ZNF292O60281 2723 aa0.59□□□□□ -2.32
SDHAF3-203ENST00000479853 CICQ96RK0 1608 aaPredicted RBP0.59□□□□□ -2.32
SDHAF3-203ENST00000479853 PTPRZ1P23471 2315 aaPredicted RBP0.59□□□□□ -2.32
SDHAF3-203ENST00000479853 ANKRD50Q9ULJ7 1429 aa0.58□□□□□ -2.32
SDHAF3-203ENST00000479853 NESP48681 1621 aa0.58□□□□□ -2.32
SDHAF3-203ENST00000479853 DEFB109BQ30KR1 87 aa0.58□□□□□ -2.32
SDHAF3-203ENST00000479853 HEPN1Q6WQI6 88 aa0.58□□□□□ -2.32
SDHAF3-203ENST00000479853 RICTORQ6R327 1708 aa0.58□□□□□ -2.32
SDHAF3-203ENST00000479853 ABCA9Q8IUA7 1624 aa0.57□□□□□ -2.32
SDHAF3-203ENST00000479853 MADDQ8WXG6 1647 aa0.57□□□□□ -2.32
SDHAF3-203ENST00000479853 SYNE1Q8NF91 8797 aaKnown RBP0.57□□□□□ -2.32
SDHAF3-203ENST00000479853 PLCH1Q4KWH8 1693 aa0.57□□□□□ -2.32
SDHAF3-203ENST00000479853 TNRC6CQ9HCJ0 1690 aaKnown RBP0.57□□□□□ -2.32
SDHAF3-203ENST00000479853 KLK9Q2XQG4 91 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms