RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 SNX29P2Q8IUI4 249 aa-0.05□□□□□ -2.42
CCDC58-204ENST00000479414 CNFNQ9BYD5 112 aa-0.05□□□□□ -2.42
CCDC58-204ENST00000479414 CYP4F30PQ9H0H9 118 aa-0.05□□□□□ -2.42
CCDC58-204ENST00000479414 NPVFQ9HCQ7 196 aa-0.05□□□□□ -2.42
CCDC58-204ENST00000479414 RPRMQ9NS64 109 aa-0.05□□□□□ -2.42
CCDC58-204ENST00000479414 GINS2Q9Y248 185 aa-0.05□□□□□ -2.42
CCDC58-204ENST00000479414 ANKRD36CQ5JPF3 1778 aa-0.05□□□□□ -2.42
CCDC58-204ENST00000479414 MYH13Q9UKX3 1938 aa-0.05□□□□□ -2.42
CCDC58-204ENST00000479414 H0YJX3 145 aa-0.06□□□□□ -2.42
CCDC58-204ENST00000479414 MT2AP02795 61 aa-0.06□□□□□ -2.42
CCDC58-204ENST00000479414 NBEAP1P0C6P0 100 aa-0.06□□□□□ -2.42
CCDC58-204ENST00000479414 PIPP12273 146 aaPredicted RBP-0.06□□□□□ -2.42
CCDC58-204ENST00000479414 COX6B1P14854 86 aa-0.06□□□□□ -2.42
CCDC58-204ENST00000479414 DCDP81605 110 aaKnown RBP-0.06□□□□□ -2.42
CCDC58-204ENST00000479414 KRTAP6-1Q3LI64 71 aa-0.06□□□□□ -2.42
CCDC58-204ENST00000479414 ATP11AUNQ6ZP68 121 aa-0.06□□□□□ -2.42
CCDC58-204ENST00000479414 Q6ZRX8 168 aa-0.06□□□□□ -2.42
CCDC58-204ENST00000479414 KRTAP8-1Q8IUC2 63 aa-0.06□□□□□ -2.42
CCDC58-204ENST00000479414 PSMG3Q9BT73 122 aaPredicted RBP-0.06□□□□□ -2.42
CCDC58-204ENST00000479414 DOCK1Q14185 1865 aa-0.06□□□□□ -2.42
CCDC58-204ENST00000479414 DAPK1P53355 1430 aa-0.06□□□□□ -2.42
CCDC58-204ENST00000479414 SCAPERQ9BY12 1400 aa-0.06□□□□□ -2.42
CCDC58-204ENST00000479414 GVQW2A0A096LPI5 108 aaPredicted RBP-0.07□□□□□ -2.42
CCDC58-204ENST00000479414 TRBV10-3A0A0K0K1G6 114 aa-0.07□□□□□ -2.42
CCDC58-204ENST00000479414 LYNX1G3V0Z9 82 aa-0.07□□□□□ -2.42
CCDC58-204ENST00000479414 M0R2T5 61 aa-0.07□□□□□ -2.42
CCDC58-204ENST00000479414 TNFSF15O95150 251 aa-0.07□□□□□ -2.42
CCDC58-204ENST00000479414 HLA-DRB4P13762 266 aa-0.07□□□□□ -2.42
CCDC58-204ENST00000479414 HAMPP81172 84 aa-0.07□□□□□ -2.42
CCDC58-204ENST00000479414 WFDC2Q14508 124 aa-0.07□□□□□ -2.42
CCDC58-204ENST00000479414 SPANXN1Q5VSR9 72 aa-0.07□□□□□ -2.42
CCDC58-204ENST00000479414 SCIMPQ6UWF3 145 aa-0.07□□□□□ -2.42
CCDC58-204ENST00000479414 Q8IZM0 81 aa-0.07□□□□□ -2.42
CCDC58-204ENST00000479414 C20orf197Q8N268 126 aa-0.07□□□□□ -2.42
CCDC58-204ENST00000479414 MAFIPQ8WZ33 124 aa-0.07□□□□□ -2.42
CCDC58-204ENST00000479414 BANF2Q9H503 90 aa-0.07□□□□□ -2.42
CCDC58-204ENST00000479414 PRO0255Q9UI72 69 aa-0.07□□□□□ -2.42
CCDC58-204ENST00000479414 HLA-DRB4X5D2U9 266 aa-0.07□□□□□ -2.42
CCDC58-204ENST00000479414 CPSF1Q10570 1443 aaKnown RBP-0.07□□□□□ -2.42
CCDC58-204ENST00000479414 PPLO60437 1756 aa-0.07□□□□□ -2.42
CCDC58-204ENST00000479414 MYO7BQ6PIF6 2116 aa-0.07□□□□□ -2.42
CCDC58-204ENST00000479414 FOCADQ5VW36 1801 aa-0.08□□□□□ -2.42
CCDC58-204ENST00000479414 ZNF815PA8K554 130 aa-0.08□□□□□ -2.42
CCDC58-204ENST00000479414 SLC25A6P12236 298 aa-0.08□□□□□ -2.42
CCDC58-204ENST00000479414 CCDC153Q494R4 210 aa-0.08□□□□□ -2.42
CCDC58-204ENST00000479414 DEFB104AQ8WTQ1 72 aa-0.08□□□□□ -2.42
CCDC58-204ENST00000479414 SMIM4Q8WVI0 70 aa-0.08□□□□□ -2.42
CCDC58-204ENST00000479414 IFI27L1Q96BM0 104 aa-0.08□□□□□ -2.42
CCDC58-204ENST00000479414 CD163L1Q9NR16 1453 aa-0.09□□□□□ -2.42
CCDC58-204ENST00000479414 PDCD11Q14690 1871 aaKnown RBP-0.09□□□□□ -2.42
CCDC58-204ENST00000479414 M0R2P5 195 aa-0.09□□□□□ -2.42
CCDC58-204ENST00000479414 SNCGO76070 127 aa-0.09□□□□□ -2.42
CCDC58-204ENST00000479414 MT1BP07438 61 aa-0.09□□□□□ -2.42
CCDC58-204ENST00000479414 CCL3L1P16619 93 aa-0.09□□□□□ -2.42
CCDC58-204ENST00000479414 KRTAP6-2Q3LI66 62 aa-0.09□□□□□ -2.42
CCDC58-204ENST00000479414 CLLU1Q5K131 121 aa-0.09□□□□□ -2.42
CCDC58-204ENST00000479414 OR2T2Q6IF00 324 aa-0.09□□□□□ -2.42
CCDC58-204ENST00000479414 SSBP3-AS1Q7Z2R9 100 aa-0.09□□□□□ -2.42
CCDC58-204ENST00000479414 TAC4Q86UU9 113 aa-0.09□□□□□ -2.42
CCDC58-204ENST00000479414 BAGE3Q86Y29 109 aa-0.09□□□□□ -2.42
CCDC58-204ENST00000479414 AIF1LQ9BQI0 150 aa-0.09□□□□□ -2.42
CCDC58-204ENST00000479414 GSKIPQ9P0R6 139 aa-0.09□□□□□ -2.42
CCDC58-204ENST00000479414 R4GMQ9 66 aa-0.09□□□□□ -2.42
CCDC58-204ENST00000479414 PSME4Q14997 1843 aa-0.09□□□□□ -2.42
CCDC58-204ENST00000479414 MYH8P13535 1937 aa-0.09□□□□□ -2.42
CCDC58-204ENST00000479414 EDC4Q6P2E9 1401 aaKnown RBP-0.1□□□□□ -2.43
CCDC58-204ENST00000479414 GCC2Q8IWJ2 1684 aa-0.1□□□□□ -2.43
CCDC58-204ENST00000479414 TRAV12-3A0A0B4J271 114 aa-0.1□□□□□ -2.43
CCDC58-204ENST00000479414 A0A1B0GX51 115 aa-0.1□□□□□ -2.43
CCDC58-204ENST00000479414 GNG14A0A1W2PPG7 69 aa-0.1□□□□□ -2.43
CCDC58-204ENST00000479414 PIGYQ3MUY2 71 aa-0.1□□□□□ -2.43
CCDC58-204ENST00000479414 DEFB121Q5J5C9 76 aa-0.1□□□□□ -2.43
CCDC58-204ENST00000479414 HIGD1AQ9Y241 93 aa-0.1□□□□□ -2.43
CCDC58-204ENST00000479414 CCDC141Q6ZP82 1450 aa-0.1□□□□□ -2.43
CCDC58-204ENST00000479414 SPEF2Q9C093 1822 aa-0.1□□□□□ -2.43
CCDC58-204ENST00000479414 FXYD6-FXYD2A0A087WZ82 144 aa-0.11□□□□□ -2.43
CCDC58-204ENST00000479414 TRGV1A0A0A0MS02 117 aa-0.11□□□□□ -2.43
CCDC58-204ENST00000479414 SCTP09683 121 aa-0.11□□□□□ -2.43
CCDC58-204ENST00000479414 EDDM3BP56851 147 aa-0.11□□□□□ -2.43
CCDC58-204ENST00000479414 RRAS2P62070 204 aaPredicted RBP-0.11□□□□□ -2.43
CCDC58-204ENST00000479414 LZICQ8WZA0 190 aa-0.11□□□□□ -2.43
CCDC58-204ENST00000479414 IBTKQ9P2D0 1353 aaPredicted RBP-0.11□□□□□ -2.43
CCDC58-204ENST00000479414 CEP162Q5TB80 1403 aa-0.12□□□□□ -2.43
CCDC58-204ENST00000479414 SPINK4O60575 86 aa-0.12□□□□□ -2.43
CCDC58-204ENST00000479414 KRTAP19-7Q3SYF9 63 aa-0.12□□□□□ -2.43
CCDC58-204ENST00000479414 MT1MQ8N339 61 aa-0.12□□□□□ -2.43
CCDC58-204ENST00000479414 VSTM2AQ8TAG5 236 aa-0.12□□□□□ -2.43
CCDC58-204ENST00000479414 COPS9Q8WXC6 57 aa-0.12□□□□□ -2.43
CCDC58-204ENST00000479414 AQP10Q96PS8 301 aa-0.12□□□□□ -2.43
CCDC58-204ENST00000479414 MRPL40Q9NQ50 206 aaKnown RBP-0.12□□□□□ -2.43
CCDC58-204ENST00000479414 SCN3BQ9NY72 215 aa-0.12□□□□□ -2.43
CCDC58-204ENST00000479414 DOCK11Q5JSL3 2073 aa-0.12□□□□□ -2.43
CCDC58-204ENST00000479414 ANKRD36BQ8N2N9 1353 aa-0.13□□□□□ -2.43
CCDC58-204ENST00000479414 TRBV20-1A0A075B6N2 111 aa-0.13□□□□□ -2.43
CCDC58-204ENST00000479414 TRAV1-2A0A0B4J238 106 aa-0.13□□□□□ -2.43
CCDC58-204ENST00000479414 M0R2Z0 102 aa-0.13□□□□□ -2.43
CCDC58-204ENST00000479414 B2MP61769 119 aa-0.13□□□□□ -2.43
CCDC58-204ENST00000479414 SPAG11BQ08648 103 aa-0.13□□□□□ -2.43
CCDC58-204ENST00000479414 C9orf116Q5BN46 136 aaPredicted RBP-0.13□□□□□ -2.43
CCDC58-204ENST00000479414 ZNF818PQ6ZRF7 136 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms