RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 C12orf73Q69YU5 71 aa2.57□□□□□ -2
RFC4-212ENST00000479307 Q6ZQT7 251 aa2.57□□□□□ -2
RFC4-212ENST00000479307 KRTAP5-5Q701N2 237 aaPredicted RBP2.57□□□□□ -2
RFC4-212ENST00000479307 SERP2Q8N6R1 65 aa2.57□□□□□ -2
RFC4-212ENST00000479307 TSKUQ8WUA8 353 aa2.57□□□□□ -2
RFC4-212ENST00000479307 ODF3Q96PU9 254 aa2.57□□□□□ -2
RFC4-212ENST00000479307 TRGV9Q99603 122 aa2.57□□□□□ -2
RFC4-212ENST00000479307 UPK3BQ9BT76 320 aa2.57□□□□□ -2
RFC4-212ENST00000479307 FAM103A1Q9BTL3 118 aaKnown RBP2.57□□□□□ -2
RFC4-212ENST00000479307 ARL2-SNX15V9GYD0 113 aa2.57□□□□□ -2
RFC4-212ENST00000479307 IGKV1-6A0A0C4DH72 117 aa2.56□□□□□ -2
RFC4-212ENST00000479307 hADV29S1A0JD25 119 aa2.56□□□□□ -2
RFC4-212ENST00000479307 F2Z2F3 143 aa2.56□□□□□ -2
RFC4-212ENST00000479307 H3BP45 60 aa2.56□□□□□ -2
RFC4-212ENST00000479307 H3BUA1 57 aa2.56□□□□□ -2
RFC4-212ENST00000479307 M0R378 163 aa2.56□□□□□ -2
RFC4-212ENST00000479307 IGKV1-39P01597 117 aa2.56□□□□□ -2
RFC4-212ENST00000479307 IGKV1D-39P04432 117 aa2.56□□□□□ -2
RFC4-212ENST00000479307 FUSP35637 526 aaKnown RBP eCLIP2.56□□□□□ -2
RFC4-212ENST00000479307 RPS27P42677 84 aaKnown RBP2.56□□□□□ -2
RFC4-212ENST00000479307 KRTAP10-4P60372 401 aaPredicted RBP2.56□□□□□ -2
RFC4-212ENST00000479307 SNRPD3P62318 126 aaKnown RBP2.56□□□□□ -2
RFC4-212ENST00000479307 EBLN2Q6P2I7 272 aa2.56□□□□□ -2
RFC4-212ENST00000479307 CLEC19AQ6UXS0 136 aa2.56□□□□□ -2
RFC4-212ENST00000479307 LCA10Q71F78 164 aa2.56□□□□□ -2
RFC4-212ENST00000479307 FP248Q71RG6 208 aaPredicted RBP2.56□□□□□ -2
RFC4-212ENST00000479307 PHF5AQ7RTV0 110 aaKnown RBP2.56□□□□□ -2
RFC4-212ENST00000479307 C5orf38Q86SI9 138 aa2.56□□□□□ -2
RFC4-212ENST00000479307 PDPNQ86YL7 162 aa2.56□□□□□ -2
RFC4-212ENST00000479307 DCANP1Q8TF63 244 aa2.56□□□□□ -2
RFC4-212ENST00000479307 LEAP2Q969E1 77 aa2.56□□□□□ -2
RFC4-212ENST00000479307 TOMM6Q96B49 74 aa2.56□□□□□ -2
RFC4-212ENST00000479307 SMIM7Q9BQ49 75 aa2.56□□□□□ -2
RFC4-212ENST00000479307 TRAV8-3A0A0A6YYJ7 113 aa2.55□□□□□ -2
RFC4-212ENST00000479307 FFAR1O14842 300 aa2.55□□□□□ -2
RFC4-212ENST00000479307 ZNF73O43830 326 aaPredicted RBP2.55□□□□□ -2
RFC4-212ENST00000479307 NDUFA3O95167 84 aa2.55□□□□□ -2
RFC4-212ENST00000479307 CGB3P0DN86 165 aa2.55□□□□□ -2
RFC4-212ENST00000479307 CGB7P0DN87 165 aa2.55□□□□□ -2
RFC4-212ENST00000479307 MIFP14174 115 aa2.55□□□□□ -2
RFC4-212ENST00000479307 ZNF137PP52743 207 aa2.55□□□□□ -2
RFC4-212ENST00000479307 C6orf201Q7Z4U5 140 aa2.55□□□□□ -2
RFC4-212ENST00000479307 C1orf64Q8NEQ6 169 aa2.55□□□□□ -2
RFC4-212ENST00000479307 OR8A1Q8NGG7 326 aa2.55□□□□□ -2
RFC4-212ENST00000479307 OR5C1Q8NGR4 320 aa2.55□□□□□ -2
RFC4-212ENST00000479307 CHCHD1Q96BP2 118 aaKnown RBP2.55□□□□□ -2
RFC4-212ENST00000479307 NXT2Q9NPJ8 142 aaKnown RBP2.55□□□□□ -2
RFC4-212ENST00000479307 A8MUN3 132 aa2.54□□□□□ -2
RFC4-212ENST00000479307 LST1O00453 97 aa2.54□□□□□ -2
RFC4-212ENST00000479307 GCHFRP30047 84 aa2.54□□□□□ -2
RFC4-212ENST00000479307 FXYD6P3P58550 94 aa2.54□□□□□ -2
RFC4-212ENST00000479307 UBE2D3P61077 147 aa2.54□□□□□ -2
RFC4-212ENST00000479307 UBE2D2P62837 147 aa2.54□□□□□ -2
RFC4-212ENST00000479307 RPL30P62888 115 aaKnown RBP2.54□□□□□ -2
RFC4-212ENST00000479307 HBBP68871 147 aa2.54□□□□□ -2
RFC4-212ENST00000479307 LINC00643Q86TS7 51 aa2.54□□□□□ -2
RFC4-212ENST00000479307 TMEM75Q8N9X5 138 aa2.54□□□□□ -2
RFC4-212ENST00000479307 TXNDC17Q9BRA2 123 aa2.54□□□□□ -2
RFC4-212ENST00000479307 IL36BQ9NZH7 164 aa2.54□□□□□ -2
RFC4-212ENST00000479307 TRBV20OR9-2A0A075B6H5 130 aa2.53□□□□□ -2
RFC4-212ENST00000479307 M0R381 172 aa2.53□□□□□ -2
RFC4-212ENST00000479307 NDUFC1O43677 76 aa2.53□□□□□ -2
RFC4-212ENST00000479307 BCE1O60756 84 aa2.53□□□□□ -2
RFC4-212ENST00000479307 NPYP01303 97 aa2.53□□□□□ -2
RFC4-212ENST00000479307 HBDP02042 147 aa2.53□□□□□ -2
RFC4-212ENST00000479307 MP68P56378 58 aa2.53□□□□□ -2
RFC4-212ENST00000479307 MIC13Q5XKP0 118 aa2.53□□□□□ -2
RFC4-212ENST00000479307 SDIM1Q6ZPB5 146 aa2.53□□□□□ -2
RFC4-212ENST00000479307 Q6ZRN7 208 aaPredicted RBP2.53□□□□□ -2
RFC4-212ENST00000479307 FXYD5Q96DB9 178 aa2.53□□□□□ -2
RFC4-212ENST00000479307 ABHD14BQ96IU4 210 aa2.53□□□□□ -2
RFC4-212ENST00000479307 USMG5Q96IX5 58 aa2.53□□□□□ -2
RFC4-212ENST00000479307 SND1-IT1Q9HBX3 110 aa2.53□□□□□ -2
RFC4-212ENST00000479307 ZNF492Q9P255 531 aa2.53□□□□□ -2
RFC4-212ENST00000479307 EPDR1Q9UM22 224 aa2.53□□□□□ -2
RFC4-212ENST00000479307 LY96Q9Y6Y9 160 aa2.53□□□□□ -2
RFC4-212ENST00000479307 MYMXA0A1B0GTQ4 84 aa2.52□□□□□ -2.01
RFC4-212ENST00000479307 LOC389332A0A1B0GUA5 103 aa2.52□□□□□ -2.01
RFC4-212ENST00000479307 A6NIN4 97 aa2.52□□□□□ -2.01
RFC4-212ENST00000479307 IBA57-AS1B1ANH7 110 aa2.52□□□□□ -2.01
RFC4-212ENST00000479307 TMEM256-PLSCR3K7ERE1 68 aa2.52□□□□□ -2.01
RFC4-212ENST00000479307 TIMM17BO60830 172 aa2.52□□□□□ -2.01
RFC4-212ENST00000479307 IGLV3-1P01715 115 aa2.52□□□□□ -2.01
RFC4-212ENST00000479307 FXYD2P54710 66 aa2.52□□□□□ -2.01
RFC4-212ENST00000479307 SMIM11AP58511 58 aa2.52□□□□□ -2.01
RFC4-212ENST00000479307 UBE2BP63146 152 aa2.52□□□□□ -2.01
RFC4-212ENST00000479307 CCL20P78556 96 aa2.52□□□□□ -2.01
RFC4-212ENST00000479307 FAM19A3Q7Z5A8 133 aa2.52□□□□□ -2.01
RFC4-212ENST00000479307 Q8IYB0 196 aa2.52□□□□□ -2.01
RFC4-212ENST00000479307 LINC00337Q8N6G1 96 aa2.52□□□□□ -2.01
RFC4-212ENST00000479307 Q8N8P6 123 aa2.52□□□□□ -2.01
RFC4-212ENST00000479307 LINC00304Q8N9R0 145 aa2.52□□□□□ -2.01
RFC4-212ENST00000479307 LINC00588Q9Y4M8 146 aa2.52□□□□□ -2.01
RFC4-212ENST00000479307 H3BMM0 161 aa2.51□□□□□ -2.01
RFC4-212ENST00000479307 COX7A2LO14548 114 aa2.51□□□□□ -2.01
RFC4-212ENST00000479307 SLC25A20O43772 301 aa2.51□□□□□ -2.01
RFC4-212ENST00000479307 LEPROTL1O95214 131 aa2.51□□□□□ -2.01
RFC4-212ENST00000479307 ZNF80P51504 273 aaPredicted RBP2.51□□□□□ -2.01
RFC4-212ENST00000479307 SERF2P84101 59 aa2.51□□□□□ -2.01
RFC4-212ENST00000479307 GPHB5Q86YW7 130 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms