RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 A0A087WTM6 91 aa4.47□□□□□ -1.69
VCP-205ENST00000479300 H7C423 109 aa4.47□□□□□ -1.69
VCP-205ENST00000479300 J3QQQ9 107 aa4.47□□□□□ -1.69
VCP-205ENST00000479300 LST1O00453 97 aa4.47□□□□□ -1.69
VCP-205ENST00000479300 IGHV3-30-3P0DP02 117 aa4.47□□□□□ -1.69
VCP-205ENST00000479300 HIST1H4AP62805 103 aaKnown RBP4.47□□□□□ -1.69
VCP-205ENST00000479300 Q1RN00 199 aa4.47□□□□□ -1.69
VCP-205ENST00000479300 LINC01556Q5JQF7 62 aa4.47□□□□□ -1.69
VCP-205ENST00000479300 SDIM1Q6ZPB5 146 aa4.47□□□□□ -1.69
VCP-205ENST00000479300 C5orf38Q86SI9 138 aa4.47□□□□□ -1.69
VCP-205ENST00000479300 RMI2Q96E14 147 aa4.47□□□□□ -1.69
VCP-205ENST00000479300 IGLV5-52A0A0A0MRZ9 124 aa4.46□□□□□ -1.7
VCP-205ENST00000479300 TRAV8-3A0A0A6YYJ7 113 aa4.46□□□□□ -1.7
VCP-205ENST00000479300 IGKV3D-20A0A0C4DH25 116 aa4.46□□□□□ -1.7
VCP-205ENST00000479300 LOC107984640A0A0U1RRK4 108 aa4.46□□□□□ -1.7
VCP-205ENST00000479300 TMEM223A0PJW6 202 aa4.46□□□□□ -1.7
VCP-205ENST00000479300 KRTAP29-1A8MX34 341 aaPredicted RBP4.46□□□□□ -1.7
VCP-205ENST00000479300 IBA57-AS1B1ANH7 110 aa4.46□□□□□ -1.7
VCP-205ENST00000479300 TRIAP1O43715 76 aa4.46□□□□□ -1.7
VCP-205ENST00000479300 RNASE3P12724 160 aaKnown RBP4.46□□□□□ -1.7
VCP-205ENST00000479300 TSPEAR-AS2P59090 65 aa4.46□□□□□ -1.7
VCP-205ENST00000479300 FAM74A4Q5TZK3 123 aa4.46□□□□□ -1.7
VCP-205ENST00000479300 Q6ZSN1 163 aa4.46□□□□□ -1.7
VCP-205ENST00000479300 DPH3P1Q9H4G8 78 aa4.46□□□□□ -1.7
VCP-205ENST00000479300 FAM30AQ9NZY2 134 aa4.46□□□□□ -1.7
VCP-205ENST00000479300 FAT3Q8TDW7 4589 aa4.45□□□□□ -1.7
VCP-205ENST00000479300 TRACP01848 142 aa4.45□□□□□ -1.7
VCP-205ENST00000479300 RPL36AP83881 106 aaKnown RBP4.45□□□□□ -1.7
VCP-205ENST00000479300 SPANXN1Q5VSR9 72 aa4.45□□□□□ -1.7
VCP-205ENST00000479300 DAND5Q8N907 189 aa4.45□□□□□ -1.7
VCP-205ENST00000479300 RPL36ALQ969Q0 106 aaKnown RBP4.45□□□□□ -1.7
VCP-205ENST00000479300 C2orf48Q96LS8 159 aa4.45□□□□□ -1.7
VCP-205ENST00000479300 TRAV26-2A0A0B4J265 109 aa4.44□□□□□ -1.7
VCP-205ENST00000479300 IGIPA6NJ69 53 aa4.44□□□□□ -1.7
VCP-205ENST00000479300 NDUFC2-KCTD14E9PQ53 114 aa4.44□□□□□ -1.7
VCP-205ENST00000479300 PLA2G1BP04054 148 aaKnown RBP4.44□□□□□ -1.7
VCP-205ENST00000479300 MUSTN1Q8IVN3 82 aa4.44□□□□□ -1.7
VCP-205ENST00000479300 A0A087WWL8 130 aa4.43□□□□□ -1.7
VCP-205ENST00000479300 TRBV10-1A0A0K0K1A3 114 aa4.43□□□□□ -1.7
VCP-205ENST00000479300 F5H697 171 aa4.43□□□□□ -1.7
VCP-205ENST00000479300 TSHBP01222 138 aa4.43□□□□□ -1.7
VCP-205ENST00000479300 C14orf178Q8N769 122 aaPredicted RBP4.43□□□□□ -1.7
VCP-205ENST00000479300 DPH3Q96FX2 82 aa4.43□□□□□ -1.7
VCP-205ENST00000479300 JPT2Q9H910 190 aa4.43□□□□□ -1.7
VCP-205ENST00000479300 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.43□□□□□ -1.7
VCP-205ENST00000479300 RNF213Q63HN8 5207 aa4.42□□□□□ -1.7
VCP-205ENST00000479300 A0A0J9YXY3 114 aa4.42□□□□□ -1.7
VCP-205ENST00000479300 LRCOL1A6NCL2 159 aa4.42□□□□□ -1.7
VCP-205ENST00000479300 F8WDY8 70 aa4.42□□□□□ -1.7
VCP-205ENST00000479300 H7C2G1 150 aa4.42□□□□□ -1.7
VCP-205ENST00000479300 TIMM17BO60830 172 aa4.42□□□□□ -1.7
VCP-205ENST00000479300 CRPP02741 224 aa4.42□□□□□ -1.7
VCP-205ENST00000479300 KRTAP10-4P60372 401 aaPredicted RBP4.42□□□□□ -1.7
VCP-205ENST00000479300 Q8N814 137 aa4.42□□□□□ -1.7
VCP-205ENST00000479300 CHCHD7Q9BUK0 85 aa4.42□□□□□ -1.7
VCP-205ENST00000479300 IGKV2D-24A0A075B6R9 120 aa4.41□□□□□ -1.7
VCP-205ENST00000479300 TRBV6-5A0A0K0K1A5 114 aa4.41□□□□□ -1.7
VCP-205ENST00000479300 VCYO14598 125 aa4.41□□□□□ -1.7
VCP-205ENST00000479300 ZNF22P17026 224 aaPredicted RBP4.41□□□□□ -1.7
VCP-205ENST00000479300 POLR2KP53803 58 aaKnown RBP4.41□□□□□ -1.7
VCP-205ENST00000479300 RPL18AQ02543 176 aaKnown RBP4.41□□□□□ -1.7
VCP-205ENST00000479300 MIAQ16674 131 aa4.41□□□□□ -1.7
VCP-205ENST00000479300 DAZ4Q86SG3 579 aaKnown RBP4.41□□□□□ -1.7
VCP-205ENST00000479300 SERP2Q8N6R1 65 aa4.41□□□□□ -1.7
VCP-205ENST00000479300 SMCR5Q8TEV8 140 aa4.41□□□□□ -1.7
VCP-205ENST00000479300 RPL39LQ96EH5 51 aaKnown RBP4.41□□□□□ -1.7
VCP-205ENST00000479300 DAZ3Q9NR90 486 aaKnown RBP4.41□□□□□ -1.7
VCP-205ENST00000479300 hADV29S1A0JD25 119 aa4.4□□□□□ -1.71
VCP-205ENST00000479300 I3L3M4 83 aa4.4□□□□□ -1.71
VCP-205ENST00000479300 MGPP08493 103 aa4.4□□□□□ -1.71
VCP-205ENST00000479300 MALP21145 153 aa4.4□□□□□ -1.71
VCP-205ENST00000479300 C14orf177Q52M58 125 aa4.4□□□□□ -1.71
VCP-205ENST00000479300 SERTAD4-AS1Q5TG53 156 aa4.4□□□□□ -1.71
VCP-205ENST00000479300 Q5XG85 94 aa4.4□□□□□ -1.71
VCP-205ENST00000479300 Q6JHZ5 121 aa4.4□□□□□ -1.71
VCP-205ENST00000479300 LITAFQ99732 161 aa4.4□□□□□ -1.71
VCP-205ENST00000479300 TIMM21Q9BVV7 248 aa4.4□□□□□ -1.71
VCP-205ENST00000479300 C1orf43Q9BWL3 253 aa4.4□□□□□ -1.71
VCP-205ENST00000479300 KLK12Q9UKR0 248 aa4.4□□□□□ -1.71
VCP-205ENST00000479300 PKHD1L1Q86WI1 4243 aa4.4□□□□□ -1.71
VCP-205ENST00000479300 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.39□□□□□ -1.71
VCP-205ENST00000479300 TRBV6-8A0A0A6YYG3 113 aa4.39□□□□□ -1.71
VCP-205ENST00000479300 TRBV27A0A0K0K1C4 114 aa4.39□□□□□ -1.71
VCP-205ENST00000479300 COX7A2LO14548 114 aa4.39□□□□□ -1.71
VCP-205ENST00000479300 LECT2O14960 151 aa4.39□□□□□ -1.71
VCP-205ENST00000479300 NDUFC2O95298 119 aa4.39□□□□□ -1.71
VCP-205ENST00000479300 ANGP03950 147 aaKnown RBP4.39□□□□□ -1.71
VCP-205ENST00000479300 Q6ZSA8 131 aa4.39□□□□□ -1.71
VCP-205ENST00000479300 COPS9Q8WXC6 57 aa4.39□□□□□ -1.71
VCP-205ENST00000479300 CLEC2BQ92478 149 aa4.39□□□□□ -1.71
VCP-205ENST00000479300 PRO0628Q9UI54 55 aa4.39□□□□□ -1.71
VCP-205ENST00000479300 TRAV13-1A0A0B4J241 112 aa4.38□□□□□ -1.71
VCP-205ENST00000479300 KIF25-AS1Q9Y6Z4 181 aa4.38□□□□□ -1.71
VCP-205ENST00000479300 OXTP01178 125 aa4.37□□□□□ -1.71
VCP-205ENST00000479300 HRCT1Q6UXD1 115 aa4.37□□□□□ -1.71
VCP-205ENST00000479300 Q8N3U1 123 aa4.37□□□□□ -1.71
VCP-205ENST00000479300 DEFB104AQ8WTQ1 72 aa4.37□□□□□ -1.71
VCP-205ENST00000479300 Q9UF83 564 aa4.37□□□□□ -1.71
VCP-205ENST00000479300 PYGO1Q9Y3Y4 419 aa4.37□□□□□ -1.71
VCP-205ENST00000479300 LRP2P98164 4655 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms