RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 KRTAP1-4P0C5Y4 121 aa9.49□□□□□ -0.89
GARNL3-215ENST00000478702 HIST1H2BOP23527 126 aa9.49□□□□□ -0.89
GARNL3-215ENST00000478702 PLNP26678 52 aa9.49□□□□□ -0.89
GARNL3-215ENST00000478702 HIST1H2BBP33778 126 aa9.49□□□□□ -0.89
GARNL3-215ENST00000478702 HIST1H2BDP58876 126 aa9.49□□□□□ -0.89
GARNL3-215ENST00000478702 HIST1H2BCP62807 126 aa9.49□□□□□ -0.89
GARNL3-215ENST00000478702 HIST2H2BEQ16778 126 aa9.49□□□□□ -0.89
GARNL3-215ENST00000478702 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.49□□□□□ -0.89
GARNL3-215ENST00000478702 HIST1H2BHQ93079 126 aa9.49□□□□□ -0.89
GARNL3-215ENST00000478702 HIST1H2BNQ99877 126 aa9.49□□□□□ -0.89
GARNL3-215ENST00000478702 HIST1H2BMQ99879 126 aa9.49□□□□□ -0.89
GARNL3-215ENST00000478702 BCE1O60756 84 aa9.48□□□□□ -0.89
GARNL3-215ENST00000478702 Q8NDZ9 215 aa9.47□□□□□ -0.89
GARNL3-215ENST00000478702 DPM2O94777 84 aa9.46□□□□□ -0.9
GARNL3-215ENST00000478702 LINC00158P58513 81 aa9.46□□□□□ -0.9
GARNL3-215ENST00000478702 TSPEAR-AS2P59090 65 aa9.46□□□□□ -0.9
GARNL3-215ENST00000478702 HERV-K104P63124 156 aa9.46□□□□□ -0.9
GARNL3-215ENST00000478702 RPL24P83731 157 aaKnown RBP9.46□□□□□ -0.9
GARNL3-215ENST00000478702 PMCHL2Q9BQD1 86 aa9.46□□□□□ -0.9
GARNL3-215ENST00000478702 MAP1LC3CQ9BXW4 147 aa9.46□□□□□ -0.9
GARNL3-215ENST00000478702 NDUFA12Q9UI09 145 aa9.46□□□□□ -0.9
GARNL3-215ENST00000478702 IGKV2-28A0A075B6P5 120 aa9.45□□□□□ -0.9
GARNL3-215ENST00000478702 IGKV2D-28P01615 120 aa9.45□□□□□ -0.9
GARNL3-215ENST00000478702 RPL28P46779 137 aaKnown RBP9.45□□□□□ -0.9
GARNL3-215ENST00000478702 IGLV1-50A0A075B6I6 118 aa9.44□□□□□ -0.9
GARNL3-215ENST00000478702 A0A0U1RRA0 63 aa9.44□□□□□ -0.9
GARNL3-215ENST00000478702 LEPROTO15243 131 aa9.44□□□□□ -0.9
GARNL3-215ENST00000478702 ATP6V1G1O75348 118 aa9.44□□□□□ -0.9
GARNL3-215ENST00000478702 IGKCP01834 107 aa9.44□□□□□ -0.9
GARNL3-215ENST00000478702 SMIM13P0DJ93 91 aa9.44□□□□□ -0.9
GARNL3-215ENST00000478702 HERVK_113P61574 105 aa9.44□□□□□ -0.9
GARNL3-215ENST00000478702 MEIG1Q5JSS6 88 aa9.44□□□□□ -0.9
GARNL3-215ENST00000478702 KRTAP13-1Q8IUC0 172 aa9.44□□□□□ -0.9
GARNL3-215ENST00000478702 PRR26Q8N8Z3 221 aa9.44□□□□□ -0.9
GARNL3-215ENST00000478702 MUC2Q02817 5179 aa9.44□□□□□ -0.9
GARNL3-215ENST00000478702 MYMXA0A1B0GTQ4 84 aa9.43□□□□□ -0.9
GARNL3-215ENST00000478702 PLEKHB2Q96CS7 222 aa9.43□□□□□ -0.9
GARNL3-215ENST00000478702 LINC00587B1AMM8 73 aa9.42□□□□□ -0.9
GARNL3-215ENST00000478702 MIR7-3HGQ8N6C7 128 aa9.41□□□□□ -0.9
GARNL3-215ENST00000478702 J3QQQ9 107 aa9.4□□□□□ -0.9
GARNL3-215ENST00000478702 UBE2AP49459 152 aa9.4□□□□□ -0.9
GARNL3-215ENST00000478702 TMEM126AQ9H061 195 aa9.4□□□□□ -0.9
GARNL3-215ENST00000478702 TMEM238C9JI98 176 aa9.39□□□□□ -0.91
GARNL3-215ENST00000478702 SYS1-DBNDD2H3BUS1 97 aa9.39□□□□□ -0.91
GARNL3-215ENST00000478702 RPL13AP40429 203 aaKnown RBP9.39□□□□□ -0.91
GARNL3-215ENST00000478702 NMUP48645 174 aa9.39□□□□□ -0.91
GARNL3-215ENST00000478702 M0R378 163 aa9.38□□□□□ -0.91
GARNL3-215ENST00000478702 LGALS3P17931 250 aaKnown RBP9.38□□□□□ -0.91
GARNL3-215ENST00000478702 COA6Q5JTJ3 125 aaKnown RBP9.38□□□□□ -0.91
GARNL3-215ENST00000478702 BOD1L2Q8IYS8 172 aa9.38□□□□□ -0.91
GARNL3-215ENST00000478702 E9PLD3 99 aa9.36□□□□□ -0.91
GARNL3-215ENST00000478702 PRLHP81277 87 aa9.36□□□□□ -0.91
GARNL3-215ENST00000478702 LINC01545Q5VT33 79 aa9.36□□□□□ -0.91
GARNL3-215ENST00000478702 KRTAP9-2Q9BYQ4 174 aa9.36□□□□□ -0.91
GARNL3-215ENST00000478702 NCR3O14931 201 aa9.35□□□□□ -0.91
GARNL3-215ENST00000478702 S100A1P23297 94 aa9.35□□□□□ -0.91
GARNL3-215ENST00000478702 PET117Q6UWS5 81 aa9.35□□□□□ -0.91
GARNL3-215ENST00000478702 FAM19A1Q7Z5A9 133 aa9.35□□□□□ -0.91
GARNL3-215ENST00000478702 IGKV2D-26A0A0A0MRZ7 120 aa9.34□□□□□ -0.91
GARNL3-215ENST00000478702 LOC107984156A0A0G2JMH3 177 aa9.34□□□□□ -0.91
GARNL3-215ENST00000478702 ARL17AQ8IVW1 177 aa9.34□□□□□ -0.91
GARNL3-215ENST00000478702 DAND5Q8N907 189 aa9.34□□□□□ -0.91
GARNL3-215ENST00000478702 A0A087X002 238 aa9.33□□□□□ -0.92
GARNL3-215ENST00000478702 PRYO14603 147 aa9.33□□□□□ -0.92
GARNL3-215ENST00000478702 C3orf79P0CE67 100 aa9.32□□□□□ -0.92
GARNL3-215ENST00000478702 A0A0J9YXY3 114 aa9.3□□□□□ -0.92
GARNL3-215ENST00000478702 CRYGAP11844 174 aa9.3□□□□□ -0.92
GARNL3-215ENST00000478702 KRTDAPP60985 99 aa9.3□□□□□ -0.92
GARNL3-215ENST00000478702 PRR4Q16378 134 aa9.3□□□□□ -0.92
GARNL3-215ENST00000478702 MIEN1Q9BRT3 115 aa9.3□□□□□ -0.92
GARNL3-215ENST00000478702 KCNQ1DNQ9H478 68 aa9.3□□□□□ -0.92
GARNL3-215ENST00000478702 TRBV10-3A0A0K0K1G6 114 aa9.29□□□□□ -0.92
GARNL3-215ENST00000478702 SPRR1AP35321 89 aa9.29□□□□□ -0.92
GARNL3-215ENST00000478702 FAM229BQ4G0N7 80 aa9.29□□□□□ -0.92
GARNL3-215ENST00000478702 TRBV10-2A0A0K0K1G8 114 aa9.28□□□□□ -0.92
GARNL3-215ENST00000478702 C20orf202A1L168 122 aa9.28□□□□□ -0.92
GARNL3-215ENST00000478702 LINC00337Q8N6G1 96 aa9.28□□□□□ -0.92
GARNL3-215ENST00000478702 SPANXB1Q9NS25 103 aaPredicted RBP9.28□□□□□ -0.92
GARNL3-215ENST00000478702 ANAPC11Q9NYG5 84 aa9.28□□□□□ -0.92
GARNL3-215ENST00000478702 KRTAP4-16G5E9R7 235 aaPredicted RBP9.27□□□□□ -0.93
GARNL3-215ENST00000478702 KRTAP13-2Q52LG2 175 aa9.27□□□□□ -0.93
GARNL3-215ENST00000478702 SOSTDC1Q6X4U4 206 aa9.27□□□□□ -0.93
GARNL3-215ENST00000478702 NDUFC2O95298 119 aa9.26□□□□□ -0.93
GARNL3-215ENST00000478702 S100A12P80511 92 aa9.26□□□□□ -0.93
GARNL3-215ENST00000478702 ADAMTSL4-AS1Q5T5F5 129 aa9.26□□□□□ -0.93
GARNL3-215ENST00000478702 TYMSOSQ8TAI1 123 aa9.26□□□□□ -0.93
GARNL3-215ENST00000478702 LITAFQ99732 161 aa9.26□□□□□ -0.93
GARNL3-215ENST00000478702 HIGD2AQ9BW72 106 aa9.26□□□□□ -0.93
GARNL3-215ENST00000478702 EIF4EBP3O60516 100 aaPredicted RBP9.25□□□□□ -0.93
GARNL3-215ENST00000478702 LCE2AQ5TA79 106 aaPredicted RBP9.25□□□□□ -0.93
GARNL3-215ENST00000478702 ZNF815PA8K554 130 aa9.24□□□□□ -0.93
GARNL3-215ENST00000478702 TIMM17BO60830 172 aa9.24□□□□□ -0.93
GARNL3-215ENST00000478702 DDTP30046 118 aa9.24□□□□□ -0.93
GARNL3-215ENST00000478702 NPC2P61916 151 aa9.24□□□□□ -0.93
GARNL3-215ENST00000478702 FAT4Q6V0I7 4981 aa9.23□□□□□ -0.93
GARNL3-215ENST00000478702 ETDCA0A1B0GVM5 59 aa9.23□□□□□ -0.93
GARNL3-215ENST00000478702 TTTY13Q9BZ97 58 aa9.23□□□□□ -0.93
GARNL3-215ENST00000478702 A0A0U1RQV1 116 aa9.22□□□□□ -0.93
GARNL3-215ENST00000478702 IGLV6-57P01721 117 aa9.22□□□□□ -0.93
GARNL3-215ENST00000478702 AKR1D1P51857 326 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms