RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 A0A1B0GU69 56 aa1.15□□□□□ -2.23
SMARCA1-204ENST00000478420 ANGP03950 147 aaKnown RBP1.15□□□□□ -2.23
SMARCA1-204ENST00000478420 IFI27P40305 119 aaPredicted RBP1.15□□□□□ -2.23
SMARCA1-204ENST00000478420 UBE2DNLQ8IWF7 75 aa1.15□□□□□ -2.23
SMARCA1-204ENST00000478420 LAMC1P11047 1609 aa1.15□□□□□ -2.23
SMARCA1-204ENST00000478420 USP32Q8NFA0 1604 aa1.15□□□□□ -2.23
SMARCA1-204ENST00000478420 EFCAB5A4FU69 1503 aa1.15□□□□□ -2.23
SMARCA1-204ENST00000478420 ASXL1Q8IXJ9 1541 aa1.15□□□□□ -2.23
SMARCA1-204ENST00000478420 USP24Q9UPU5 2620 aa1.14□□□□□ -2.23
SMARCA1-204ENST00000478420 A0A087WXM4 84 aa1.14□□□□□ -2.23
SMARCA1-204ENST00000478420 LINC00959A0A1B0GUT2 108 aa1.14□□□□□ -2.23
SMARCA1-204ENST00000478420 SSBP3-AS1Q7Z2R9 100 aa1.14□□□□□ -2.23
SMARCA1-204ENST00000478420 HILPDAQ9Y5L2 63 aa1.14□□□□□ -2.23
SMARCA1-204ENST00000478420 NAV2Q8IVL1 2488 aa1.14□□□□□ -2.23
SMARCA1-204ENST00000478420 SLIT1O75093 1534 aa1.14□□□□□ -2.23
SMARCA1-204ENST00000478420 ROS1P08922 2347 aa1.14□□□□□ -2.23
SMARCA1-204ENST00000478420 CFAP43Q8NDM7 1665 aa1.13□□□□□ -2.23
SMARCA1-204ENST00000478420 TENM1Q9UKZ4 2725 aa1.13□□□□□ -2.23
SMARCA1-204ENST00000478420 UTRNP46939 3433 aa1.13□□□□□ -2.23
SMARCA1-204ENST00000478420 RGPD1P0DJD0 1748 aa1.13□□□□□ -2.23
SMARCA1-204ENST00000478420 A0A087WWC5 75 aa1.13□□□□□ -2.23
SMARCA1-204ENST00000478420 TRAV21A0A0B4J279 112 aa1.13□□□□□ -2.23
SMARCA1-204ENST00000478420 FXYD6P3P58550 94 aa1.13□□□□□ -2.23
SMARCA1-204ENST00000478420 UBR3Q6ZT12 1888 aa1.13□□□□□ -2.23
SMARCA1-204ENST00000478420 LRRC7Q96NW7 1537 aa1.13□□□□□ -2.23
SMARCA1-204ENST00000478420 SPTBN4Q9H254 2564 aa1.12□□□□□ -2.23
SMARCA1-204ENST00000478420 ITSN1Q15811 1721 aa1.12□□□□□ -2.23
SMARCA1-204ENST00000478420 LAMA2P24043 3122 aaKnown RBP1.12□□□□□ -2.23
SMARCA1-204ENST00000478420 FASNP49327 2511 aaKnown RBP1.12□□□□□ -2.23
SMARCA1-204ENST00000478420 TULP4Q9NRJ4 1543 aa1.12□□□□□ -2.23
SMARCA1-204ENST00000478420 IFI6P09912 130 aa1.12□□□□□ -2.23
SMARCA1-204ENST00000478420 COX8AP10176 69 aa1.12□□□□□ -2.23
SMARCA1-204ENST00000478420 HMGA1P17096 107 aaKnown RBP1.12□□□□□ -2.23
SMARCA1-204ENST00000478420 KRTAP10-4P60372 401 aaPredicted RBP1.12□□□□□ -2.23
SMARCA1-204ENST00000478420 DEFB112Q30KQ8 113 aa1.12□□□□□ -2.23
SMARCA1-204ENST00000478420 ASH1LQ9NR48 2969 aaKnown RBP1.12□□□□□ -2.23
SMARCA1-204ENST00000478420 HFM1A2PYH4 1435 aa1.12□□□□□ -2.23
SMARCA1-204ENST00000478420 PLXNB2O15031 1838 aa1.12□□□□□ -2.23
SMARCA1-204ENST00000478420 SZT2Q5T011 3432 aa1.12□□□□□ -2.23
SMARCA1-204ENST00000478420 CNOT1A5YKK6 2376 aaKnown RBP1.12□□□□□ -2.23
SMARCA1-204ENST00000478420 C10orf95Q9H7T3 257 aa1.11□□□□□ -2.23
SMARCA1-204ENST00000478420 FAM208BQ5VWN6 2430 aa1.11□□□□□ -2.23
SMARCA1-204ENST00000478420 ABCA12Q86UK0 2595 aa1.11□□□□□ -2.23
SMARCA1-204ENST00000478420 EPG5Q9HCE0 2579 aa1.11□□□□□ -2.23
SMARCA1-204ENST00000478420 CDC42BPGQ6DT37 1551 aa1.11□□□□□ -2.23
SMARCA1-204ENST00000478420 PKD1L3Q7Z443 1732 aa1.11□□□□□ -2.23
SMARCA1-204ENST00000478420 ABCA9Q8IUA7 1624 aa1.11□□□□□ -2.23
SMARCA1-204ENST00000478420 TEP1Q99973 2627 aaKnown RBP1.1□□□□□ -2.23
SMARCA1-204ENST00000478420 COL6A3P12111 3177 aa1.1□□□□□ -2.23
SMARCA1-204ENST00000478420 H3BVH4 76 aa1.1□□□□□ -2.23
SMARCA1-204ENST00000478420 MYO18BQ8IUG5 2567 aa1.1□□□□□ -2.23
SMARCA1-204ENST00000478420 ABCA2Q9BZC7 2435 aa1.1□□□□□ -2.23
SMARCA1-204ENST00000478420 KIAA0556O60303 1618 aa1.1□□□□□ -2.23
SMARCA1-204ENST00000478420 TNRC18O15417 2968 aaPredicted RBP1.1□□□□□ -2.23
SMARCA1-204ENST00000478420 GCN1Q92616 2671 aaKnown RBP1.1□□□□□ -2.23
SMARCA1-204ENST00000478420 ZNF292O60281 2723 aa1.09□□□□□ -2.23
SMARCA1-204ENST00000478420 A0A0G2JMZ2 1700 aa1.09□□□□□ -2.23
SMARCA1-204ENST00000478420 NWD1Q149M9 1564 aa1.09□□□□□ -2.23
SMARCA1-204ENST00000478420 DOPEY1Q5JWR5 2465 aa1.09□□□□□ -2.23
SMARCA1-204ENST00000478420 ZFHX4Q86UP3 3567 aa1.09□□□□□ -2.23
SMARCA1-204ENST00000478420 NDUFB1O75438 58 aa1.09□□□□□ -2.23
SMARCA1-204ENST00000478420 SPINK9Q5DT21 86 aa1.09□□□□□ -2.23
SMARCA1-204ENST00000478420 WFDC9Q8NEX5 89 aa1.09□□□□□ -2.23
SMARCA1-204ENST00000478420 GAFA1Q96PS6 74 aa1.09□□□□□ -2.23
SMARCA1-204ENST00000478420 EEA1Q15075 1411 aa1.08□□□□□ -2.24
SMARCA1-204ENST00000478420 ITPR3Q14573 2671 aa1.08□□□□□ -2.24
SMARCA1-204ENST00000478420 I3L2K1 104 aa1.08□□□□□ -2.24
SMARCA1-204ENST00000478420 CLASP1Q7Z460 1538 aa1.08□□□□□ -2.24
SMARCA1-204ENST00000478420 DIP2AQ14689 1571 aa1.08□□□□□ -2.24
SMARCA1-204ENST00000478420 TTC28Q96AY4 2481 aa1.08□□□□□ -2.24
SMARCA1-204ENST00000478420 TSC2P49815 1807 aa1.08□□□□□ -2.24
SMARCA1-204ENST00000478420 VCANP13611 3396 aa1.07□□□□□ -2.24
SMARCA1-204ENST00000478420 UNC80Q8N2C7 3258 aa1.07□□□□□ -2.24
SMARCA1-204ENST00000478420 CPS1P31327 1500 aa1.07□□□□□ -2.24
SMARCA1-204ENST00000478420 LMTK2Q8IWU2 1503 aa1.07□□□□□ -2.24
SMARCA1-204ENST00000478420 A0A0D9SG42 100 aa1.07□□□□□ -2.24
SMARCA1-204ENST00000478420 LCE6AA0A183 80 aa1.07□□□□□ -2.24
SMARCA1-204ENST00000478420 NREPQ16612 68 aa1.07□□□□□ -2.24
SMARCA1-204ENST00000478420 SETD2Q9BYW2 2564 aaPredicted RBP1.07□□□□□ -2.24
SMARCA1-204ENST00000478420 C2CD3Q4AC94 2353 aa1.07□□□□□ -2.24
SMARCA1-204ENST00000478420 PAPPAQ13219 1627 aa1.07□□□□□ -2.24
SMARCA1-204ENST00000478420 EP400Q96L91 3159 aa1.06□□□□□ -2.24
SMARCA1-204ENST00000478420 HECTD1Q9ULT8 2610 aa1.06□□□□□ -2.24
SMARCA1-204ENST00000478420 RALGAPBQ86X10 1494 aa1.06□□□□□ -2.24
SMARCA1-204ENST00000478420 COL14A1Q05707 1796 aaKnown RBP1.06□□□□□ -2.24
SMARCA1-204ENST00000478420 BPTFQ12830 3046 aa1.06□□□□□ -2.24
SMARCA1-204ENST00000478420 REV3LO60673 3130 aa1.06□□□□□ -2.24
SMARCA1-204ENST00000478420 FXYD6-FXYD2A0A087WZ82 144 aa1.06□□□□□ -2.24
SMARCA1-204ENST00000478420 SFTA3P0C7M3 94 aa1.06□□□□□ -2.24
SMARCA1-204ENST00000478420 C3orf79P0CE67 100 aa1.06□□□□□ -2.24
SMARCA1-204ENST00000478420 COX7BP24311 80 aa1.06□□□□□ -2.24
SMARCA1-204ENST00000478420 CACNA1EQ15878 2313 aa1.06□□□□□ -2.24
SMARCA1-204ENST00000478420 CFAP47Q6ZTR5 3102 aa1.06□□□□□ -2.24
SMARCA1-204ENST00000478420 ANKRD50Q9ULJ7 1429 aa1.06□□□□□ -2.24
SMARCA1-204ENST00000478420 AHNAK2Q8IVF2 5795 aa1.06□□□□□ -2.24
SMARCA1-204ENST00000478420 UBR4Q5T4S7 5183 aa1.05□□□□□ -2.24
SMARCA1-204ENST00000478420 PTPRZ1P23471 2315 aaPredicted RBP1.05□□□□□ -2.24
SMARCA1-204ENST00000478420 EYSQ5T1H1 3165 aa1.05□□□□□ -2.24
SMARCA1-204ENST00000478420 RANBP2P49792 3224 aaKnown RBP1.05□□□□□ -2.24
SMARCA1-204ENST00000478420 CCDC180Q9P1Z9 1646 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms