RNA–Protein interactions for RNA: ENST00000478238.1

SYCP3-205, Transcript of synaptonemal complex protein 3, humanhuman

TSL 3

Gene SYCP3, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-205ENST00000478238 IER3IP1Q9Y5U9 82 aa-0.58□□□□□ -2.5
SYCP3-205ENST00000478238 EDC4Q6P2E9 1401 aaKnown RBP-0.58□□□□□ -2.5
SYCP3-205ENST00000478238 C5P01031 1676 aa-0.59□□□□□ -2.5
SYCP3-205ENST00000478238 KNL1Q8NG31 2342 aa-0.59□□□□□ -2.5
SYCP3-205ENST00000478238 SONP18583 2426 aaKnown RBP-0.59□□□□□ -2.5
SYCP3-205ENST00000478238 A0A1B0GV90 55 aa-0.59□□□□□ -2.5
SYCP3-205ENST00000478238 ASIPP42127 132 aa-0.59□□□□□ -2.5
SYCP3-205ENST00000478238 GNG4P50150 75 aa-0.59□□□□□ -2.5
SYCP3-205ENST00000478238 RPL13AP3Q6NVV1 102 aa-0.59□□□□□ -2.5
SYCP3-205ENST00000478238 HEPN1Q6WQI6 88 aa-0.59□□□□□ -2.5
SYCP3-205ENST00000478238 MRPL34Q9BQ48 92 aaKnown RBP-0.59□□□□□ -2.5
SYCP3-205ENST00000478238 ADAMTS12P58397 1594 aa-0.59□□□□□ -2.5
SYCP3-205ENST00000478238 EPG5Q9HCE0 2579 aa-0.59□□□□□ -2.5
SYCP3-205ENST00000478238 PTPN23Q9H3S7 1636 aa-0.6□□□□□ -2.5
SYCP3-205ENST00000478238 SPG11Q96JI7 2443 aa-0.6□□□□□ -2.51
SYCP3-205ENST00000478238 A0A0G2JND7 137 aa-0.6□□□□□ -2.51
SYCP3-205ENST00000478238 hADV29S1A0JD25 119 aa-0.6□□□□□ -2.51
SYCP3-205ENST00000478238 TMEM262E9PQX1 116 aa-0.6□□□□□ -2.51
SYCP3-205ENST00000478238 H0Y9P7 68 aa-0.6□□□□□ -2.51
SYCP3-205ENST00000478238 H3BQF6 201 aa-0.6□□□□□ -2.51
SYCP3-205ENST00000478238 CORTO00230 105 aa-0.6□□□□□ -2.51
SYCP3-205ENST00000478238 DLEU1O43261 78 aa-0.6□□□□□ -2.51
SYCP3-205ENST00000478238 S100A1P23297 94 aa-0.6□□□□□ -2.51
SYCP3-205ENST00000478238 GNGT1P63211 74 aa-0.6□□□□□ -2.51
SYCP3-205ENST00000478238 CGREF1Q99674 301 aa-0.6□□□□□ -2.51
SYCP3-205ENST00000478238 VAMP8Q9BV40 100 aa-0.6□□□□□ -2.51
SYCP3-205ENST00000478238 CUX1P39880 1505 aa-0.6□□□□□ -2.51
SYCP3-205ENST00000478238 DMXL1Q9Y485 3027 aa-0.6□□□□□ -2.51
SYCP3-205ENST00000478238 PKD1P98161 4303 aa-0.6□□□□□ -2.51
SYCP3-205ENST00000478238 PZPP20742 1482 aa-0.61□□□□□ -2.51
SYCP3-205ENST00000478238 EIF4G3O43432 1585 aaKnown RBP-0.61□□□□□ -2.51
SYCP3-205ENST00000478238 LAMA1P25391 3075 aa-0.61□□□□□ -2.51
SYCP3-205ENST00000478238 TRAV30A0A087WSZ9 112 aa-0.61□□□□□ -2.51
SYCP3-205ENST00000478238 ARMS2P0C7Q2 107 aa-0.61□□□□□ -2.51
SYCP3-205ENST00000478238 KRTDAPP60985 99 aa-0.61□□□□□ -2.51
SYCP3-205ENST00000478238 MAPKBP1O60336 1514 aa-0.61□□□□□ -2.51
SYCP3-205ENST00000478238 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.61□□□□□ -2.51
SYCP3-205ENST00000478238 KALRNO60229 2985 aa-0.61□□□□□ -2.51
SYCP3-205ENST00000478238 NCOA3Q9Y6Q9 1424 aa-0.62□□□□□ -2.51
SYCP3-205ENST00000478238 UBR3Q6ZT12 1888 aa-0.62□□□□□ -2.51
SYCP3-205ENST00000478238 H0YGG7 62 aa-0.62□□□□□ -2.51
SYCP3-205ENST00000478238 H3BQ15 152 aa-0.62□□□□□ -2.51
SYCP3-205ENST00000478238 WFDC13Q8IUB5 93 aa-0.62□□□□□ -2.51
SYCP3-205ENST00000478238 CACFD1Q9UGQ2 172 aa-0.62□□□□□ -2.51
SYCP3-205ENST00000478238 QSER1Q2KHR3 1735 aa-0.62□□□□□ -2.51
SYCP3-205ENST00000478238 PKD1L3Q7Z443 1732 aa-0.62□□□□□ -2.51
SYCP3-205ENST00000478238 VPS13BQ7Z7G8 4022 aa-0.62□□□□□ -2.51
SYCP3-205ENST00000478238 CRYBG1Q9Y4K1 1723 aa-0.62□□□□□ -2.51
SYCP3-205ENST00000478238 MYH4Q9Y623 1939 aa-0.62□□□□□ -2.51
SYCP3-205ENST00000478238 DNAH3Q8TD57 4116 aa-0.62□□□□□ -2.51
SYCP3-205ENST00000478238 VPS13DQ5THJ4 4388 aa-0.63□□□□□ -2.51
SYCP3-205ENST00000478238 USP9YO00507 2555 aaPredicted RBP-0.63□□□□□ -2.51
SYCP3-205ENST00000478238 ITPR3Q14573 2671 aa-0.63□□□□□ -2.51
SYCP3-205ENST00000478238 SPTY2D1-AS1A0A0U1RR47 76 aa-0.63□□□□□ -2.51
SYCP3-205ENST00000478238 CCL22O00626 93 aa-0.63□□□□□ -2.51
SYCP3-205ENST00000478238 PSMG4Q5JS54 123 aa-0.63□□□□□ -2.51
SYCP3-205ENST00000478238 SPRR2FQ96RM1 72 aa-0.63□□□□□ -2.51
SYCP3-205ENST00000478238 CDKN2A-AS1Q9UH64 79 aa-0.63□□□□□ -2.51
SYCP3-205ENST00000478238 GNG8Q9UK08 70 aa-0.63□□□□□ -2.51
SYCP3-205ENST00000478238 ABCC5O15440 1437 aa-0.64□□□□□ -2.51
SYCP3-205ENST00000478238 CICQ96RK0 1608 aaPredicted RBP-0.64□□□□□ -2.51
SYCP3-205ENST00000478238 C4AP0C0L4 1744 aa-0.64□□□□□ -2.51
SYCP3-205ENST00000478238 C4BP0C0L5 1744 aa-0.64□□□□□ -2.51
SYCP3-205ENST00000478238 MLH3Q9UHC1 1453 aa-0.64□□□□□ -2.51
SYCP3-205ENST00000478238 TRBV25-1A0A075B6N4 114 aa-0.64□□□□□ -2.51
SYCP3-205ENST00000478238 TRBV7-7A0A0K0K1E9 115 aa-0.64□□□□□ -2.51
SYCP3-205ENST00000478238 PMCHL1Q16048 86 aa-0.64□□□□□ -2.51
SYCP3-205ENST00000478238 GTF2H5Q6ZYL4 71 aa-0.64□□□□□ -2.51
SYCP3-205ENST00000478238 HIGD1BQ9P298 99 aa-0.64□□□□□ -2.51
SYCP3-205ENST00000478238 TEP1Q99973 2627 aaKnown RBP-0.64□□□□□ -2.51
SYCP3-205ENST00000478238 HECTD1Q9ULT8 2610 aa-0.64□□□□□ -2.51
SYCP3-205ENST00000478238 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.64□□□□□ -2.51
SYCP3-205ENST00000478238 RYR2Q92736 4967 aa-0.64□□□□□ -2.51
SYCP3-205ENST00000478238 CLIP1P30622 1438 aa-0.64□□□□□ -2.51
SYCP3-205ENST00000478238 TROQ12816 1431 aaPredicted RBP-0.64□□□□□ -2.51
SYCP3-205ENST00000478238 DNAH9Q9NYC9 4486 aa-0.65□□□□□ -2.51
SYCP3-205ENST00000478238 PDE4DIPQ5VU43 2346 aa-0.65□□□□□ -2.51
SYCP3-205ENST00000478238 SAMD9Q5K651 1589 aa-0.65□□□□□ -2.51
SYCP3-205ENST00000478238 EFCAB10A6NFE3 127 aa-0.65□□□□□ -2.51
SYCP3-205ENST00000478238 GNGT2O14610 69 aa-0.65□□□□□ -2.51
SYCP3-205ENST00000478238 TMEM203Q969S6 136 aa-0.65□□□□□ -2.51
SYCP3-205ENST00000478238 TRGV9Q99603 122 aa-0.65□□□□□ -2.51
SYCP3-205ENST00000478238 PKHD1L1Q86WI1 4243 aa-0.65□□□□□ -2.51
SYCP3-205ENST00000478238 H7BZZ5 65 aa-0.66□□□□□ -2.52
SYCP3-205ENST00000478238 NDUFC1O43677 76 aa-0.66□□□□□ -2.52
SYCP3-205ENST00000478238 MT1AP04731 61 aa-0.66□□□□□ -2.52
SYCP3-205ENST00000478238 UQCRHP07919 91 aa-0.66□□□□□ -2.52
SYCP3-205ENST00000478238 FASNP49327 2511 aaKnown RBP-0.66□□□□□ -2.52
SYCP3-205ENST00000478238 PREX1Q8TCU6 1659 aa-0.66□□□□□ -2.52
SYCP3-205ENST00000478238 ANKRD11Q6UB99 2663 aaPredicted RBP-0.66□□□□□ -2.52
SYCP3-205ENST00000478238 MUC17Q685J3 4493 aa-0.67□□□□□ -2.52
SYCP3-205ENST00000478238 CLTCQ00610 1675 aaKnown RBP-0.67□□□□□ -2.52
SYCP3-205ENST00000478238 TMEM218A2RU14 115 aa-0.67□□□□□ -2.52
SYCP3-205ENST00000478238 LINC00587B1AMM8 73 aa-0.67□□□□□ -2.52
SYCP3-205ENST00000478238 H3BNG1 76 aa-0.67□□□□□ -2.52
SYCP3-205ENST00000478238 MRPS10P82664 201 aaKnown RBP-0.67□□□□□ -2.52
SYCP3-205ENST00000478238 C2orf88Q9BSF0 95 aa-0.67□□□□□ -2.52
SYCP3-205ENST00000478238 AP4S1Q9Y587 144 aa-0.67□□□□□ -2.52
SYCP3-205ENST00000478238 A0A0C4DFX4 3053 aa-0.67□□□□□ -2.52
SYCP3-205ENST00000478238 MYO18BQ8IUG5 2567 aa-0.67□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms