RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 LECT2O14960 151 aa3.35□□□□□ -1.87
VPS45-207ENST00000477558 FUSP35637 526 aaKnown RBP eCLIP3.35□□□□□ -1.87
VPS45-207ENST00000477558 SMAGPQ0VAQ4 97 aa3.35□□□□□ -1.87
VPS45-207ENST00000477558 AMMECR1LQ6DCA0 310 aa3.35□□□□□ -1.87
VPS45-207ENST00000477558 LINC00173Q6ZV60 143 aa3.35□□□□□ -1.87
VPS45-207ENST00000477558 FAM19A3Q7Z5A8 133 aa3.35□□□□□ -1.87
VPS45-207ENST00000477558 CHCHD10Q8WYQ3 142 aaPredicted RBP3.35□□□□□ -1.87
VPS45-207ENST00000477558 AMELXQ99217 191 aa3.35□□□□□ -1.87
VPS45-207ENST00000477558 UQCR10Q9UDW1 63 aa3.35□□□□□ -1.87
VPS45-207ENST00000477558 SRRM2Q9UQ35 2752 aaKnown RBP3.34□□□□□ -1.87
VPS45-207ENST00000477558 HERC1Q15751 4861 aa3.34□□□□□ -1.87
VPS45-207ENST00000477558 A0A096LNJ9 63 aa3.34□□□□□ -1.88
VPS45-207ENST00000477558 IGHV3OR16-9A0A0B4J2B5 98 aa3.34□□□□□ -1.88
VPS45-207ENST00000477558 A0A1B0GV72 72 aa3.34□□□□□ -1.88
VPS45-207ENST00000477558 IFI27P40305 119 aaPredicted RBP3.34□□□□□ -1.88
VPS45-207ENST00000477558 HNRNPA3P51991 378 aaKnown RBP3.34□□□□□ -1.88
VPS45-207ENST00000477558 ORMDL2Q53FV1 153 aa3.34□□□□□ -1.88
VPS45-207ENST00000477558 C2orf66Q6UXQ4 117 aa3.34□□□□□ -1.88
VPS45-207ENST00000477558 C18orf32Q8TCD1 76 aa3.34□□□□□ -1.88
VPS45-207ENST00000477558 TOMM6Q96B49 74 aa3.34□□□□□ -1.88
VPS45-207ENST00000477558 TMEM101Q96IK0 257 aa3.34□□□□□ -1.88
VPS45-207ENST00000477558 TIMM17AQ99595 171 aa3.34□□□□□ -1.88
VPS45-207ENST00000477558 OCR1Q9BZK8 76 aa3.34□□□□□ -1.88
VPS45-207ENST00000477558 LOC389332A0A1B0GUA5 103 aa3.33□□□□□ -1.88
VPS45-207ENST00000477558 CIRBPQ14011 172 aaKnown RBP3.33□□□□□ -1.88
VPS45-207ENST00000477558 REG3GQ6UW15 175 aa3.33□□□□□ -1.88
VPS45-207ENST00000477558 C9orf163Q8N9P6 203 aa3.33□□□□□ -1.88
VPS45-207ENST00000477558 CYSLTR1Q9Y271 337 aa3.33□□□□□ -1.88
VPS45-207ENST00000477558 LRP1Q07954 4544 aaKnown RBP3.33□□□□□ -1.88
VPS45-207ENST00000477558 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.32□□□□□ -1.88
VPS45-207ENST00000477558 LINC01549A6NIU2 74 aa3.32□□□□□ -1.88
VPS45-207ENST00000477558 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
VPS45-207ENST00000477558 IGLC3P0DOY3 106 aa3.32□□□□□ -1.88
VPS45-207ENST00000477558 XCL1P47992 114 aa3.32□□□□□ -1.88
VPS45-207ENST00000477558 UBE2D1P51668 147 aa3.32□□□□□ -1.88
VPS45-207ENST00000477558 SS18Q15532 418 aa3.32□□□□□ -1.88
VPS45-207ENST00000477558 SPATA45Q537H7 98 aa3.32□□□□□ -1.88
VPS45-207ENST00000477558 RNASE13Q5GAN3 156 aaKnown RBP3.32□□□□□ -1.88
VPS45-207ENST00000477558 LINC00242Q5T6M2 205 aa3.32□□□□□ -1.88
VPS45-207ENST00000477558 Q6ZN92 141 aa3.32□□□□□ -1.88
VPS45-207ENST00000477558 TMEM141Q96I45 108 aa3.32□□□□□ -1.88
VPS45-207ENST00000477558 TRAPPC1Q9Y5R8 145 aa3.32□□□□□ -1.88
VPS45-207ENST00000477558 IGHV1-58A0A0C4DH39 117 aa3.31□□□□□ -1.88
VPS45-207ENST00000477558 SDIM1Q6ZPB5 146 aa3.31□□□□□ -1.88
VPS45-207ENST00000477558 LINC01561Q8N1V8 128 aa3.31□□□□□ -1.88
VPS45-207ENST00000477558 TRAV13-1A0A0B4J241 112 aa3.3□□□□□ -1.88
VPS45-207ENST00000477558 IGKV3OR2-268A0A0C4DH90 116 aa3.3□□□□□ -1.88
VPS45-207ENST00000477558 PANO1I0J062 215 aa3.3□□□□□ -1.88
VPS45-207ENST00000477558 COX7A2LO14548 114 aa3.3□□□□□ -1.88
VPS45-207ENST00000477558 HINT1P49773 126 aaPredicted RBP3.3□□□□□ -1.88
VPS45-207ENST00000477558 IGHV3-64A0A075B6Q5 118 aa3.29□□□□□ -1.88
VPS45-207ENST00000477558 TAX1BP3O14907 124 aa3.29□□□□□ -1.88
VPS45-207ENST00000477558 NUPR1O60356 82 aa3.29□□□□□ -1.88
VPS45-207ENST00000477558 HBDP02042 147 aa3.29□□□□□ -1.88
VPS45-207ENST00000477558 KRTAP10-4P60372 401 aaPredicted RBP3.29□□□□□ -1.88
VPS45-207ENST00000477558 COX6A2Q02221 97 aa3.29□□□□□ -1.88
VPS45-207ENST00000477558 KIAA0087Q14695 138 aa3.29□□□□□ -1.88
VPS45-207ENST00000477558 TAL2Q16559 108 aa3.29□□□□□ -1.88
VPS45-207ENST00000477558 HIGD2BQ4VC39 106 aa3.29□□□□□ -1.88
VPS45-207ENST00000477558 Q6ZVH6 145 aa3.29□□□□□ -1.88
VPS45-207ENST00000477558 FA2HQ7L5A8 372 aa3.29□□□□□ -1.88
VPS45-207ENST00000477558 SCXQ7RTU7 201 aa3.29□□□□□ -1.88
VPS45-207ENST00000477558 MTURNQ8N3F0 131 aa3.29□□□□□ -1.88
VPS45-207ENST00000477558 SPACA4Q8TDM5 124 aa3.29□□□□□ -1.88
VPS45-207ENST00000477558 CHCHD1Q96BP2 118 aaKnown RBP3.29□□□□□ -1.88
VPS45-207ENST00000477558 CHAC1Q9BUX1 264 aa3.29□□□□□ -1.88
VPS45-207ENST00000477558 IGLV4-69A0A075B6H9 119 aa3.28□□□□□ -1.88
VPS45-207ENST00000477558 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.28□□□□□ -1.88
VPS45-207ENST00000477558 SEC11AP67812 179 aa3.28□□□□□ -1.88
VPS45-207ENST00000477558 PMCHL1Q16048 86 aa3.28□□□□□ -1.88
VPS45-207ENST00000477558 CIRBP-AS1Q8TBR5 109 aa3.28□□□□□ -1.88
VPS45-207ENST00000477558 SIGMAR1Q99720 223 aa3.28□□□□□ -1.88
VPS45-207ENST00000477558 TINCRA0A1B0GVN0 87 aa3.27□□□□□ -1.89
VPS45-207ENST00000477558 SERF1AO75920 110 aa3.27□□□□□ -1.89
VPS45-207ENST00000477558 APOMO95445 188 aa3.27□□□□□ -1.89
VPS45-207ENST00000477558 TLX1NBP0CAT3 122 aa3.27□□□□□ -1.89
VPS45-207ENST00000477558 KRTDAPP60985 99 aa3.27□□□□□ -1.89
VPS45-207ENST00000477558 CKS1BP61024 79 aa3.27□□□□□ -1.89
VPS45-207ENST00000477558 HERVK_113P63121 156 aa3.27□□□□□ -1.89
VPS45-207ENST00000477558 SPAG11BQ08648 103 aa3.27□□□□□ -1.89
VPS45-207ENST00000477558 PMVKQ15126 192 aa3.27□□□□□ -1.89
VPS45-207ENST00000477558 Q6ZRU5 148 aa3.27□□□□□ -1.89
VPS45-207ENST00000477558 GTF2H5Q6ZYL4 71 aa3.27□□□□□ -1.89
VPS45-207ENST00000477558 C5orf38Q86SI9 138 aa3.27□□□□□ -1.89
VPS45-207ENST00000477558 CARD19Q96LW7 228 aa3.27□□□□□ -1.89
VPS45-207ENST00000477558 SCGB3A1Q96QR1 104 aa3.27□□□□□ -1.89
VPS45-207ENST00000477558 MRPL35Q9NZE8 188 aaKnown RBP3.27□□□□□ -1.89
VPS45-207ENST00000477558 PLAC8Q9NZF1 115 aa3.27□□□□□ -1.89
VPS45-207ENST00000477558 HMCN2Q8NDA2 5059 aa3.27□□□□□ -1.89
VPS45-207ENST00000477558 FLG2Q5D862 2391 aaPredicted RBP3.27□□□□□ -1.89
VPS45-207ENST00000477558 A0A0J9YXV3 536 aa3.27□□□□□ -1.89
VPS45-207ENST00000477558 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.27□□□□□ -1.89
VPS45-207ENST00000477558 HAMPP81172 84 aa3.27□□□□□ -1.89
VPS45-207ENST00000477558 SYCNQ0VAF6 134 aa3.27□□□□□ -1.89
VPS45-207ENST00000477558 BAGE3Q86Y29 109 aa3.27□□□□□ -1.89
VPS45-207ENST00000477558 LINC00526Q96FQ7 95 aa3.27□□□□□ -1.89
VPS45-207ENST00000477558 CDKN2A-AS1Q9UH64 79 aa3.27□□□□□ -1.89
VPS45-207ENST00000477558 A0A096LNI7 61 aa3.26□□□□□ -1.89
VPS45-207ENST00000477558 TRAV12-1A0A0B4J245 112 aa3.26□□□□□ -1.89
VPS45-207ENST00000477558 CHTF8P0CG12 524 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms