RNA–Protein interactions for RNA: ENST00000476961.5

CNTNAP3B-205, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 2,643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-205ENST00000476961 C18orf65Q6ZTR6 163 aa5.74□□□□□ -1.49
CNTNAP3B-205ENST00000476961 CDC42SE1Q9NRR8 79 aa5.74□□□□□ -1.49
CNTNAP3B-205ENST00000476961 TRBV10-1A0A0K0K1A3 114 aa5.74□□□□□ -1.49
CNTNAP3B-205ENST00000476961 SLPIP03973 132 aa5.74□□□□□ -1.49
CNTNAP3B-205ENST00000476961 LINC00315P59091 139 aa5.74□□□□□ -1.49
CNTNAP3B-205ENST00000476961 MUC4Q99102 2169 aa5.73□□□□□ -1.49
CNTNAP3B-205ENST00000476961 PRAC2D3DTV9 90 aa5.73□□□□□ -1.49
CNTNAP3B-205ENST00000476961 MOBPQ13875 183 aa5.73□□□□□ -1.49
CNTNAP3B-205ENST00000476961 LIMD2Q9BT23 127 aa5.73□□□□□ -1.49
CNTNAP3B-205ENST00000476961 NSD1Q96L73 2696 aaPredicted RBP5.73□□□□□ -1.49
CNTNAP3B-205ENST00000476961 IGHV3-35A0A0C4DH35 117 aa5.73□□□□□ -1.49
CNTNAP3B-205ENST00000476961 RPL11P62913 178 aaKnown RBP5.73□□□□□ -1.49
CNTNAP3B-205ENST00000476961 C20orf203Q8NBC4 194 aa5.73□□□□□ -1.49
CNTNAP3B-205ENST00000476961 SMIM11BQ8TCY0 68 aa5.73□□□□□ -1.49
CNTNAP3B-205ENST00000476961 IGHV3-11P01762 117 aa5.72□□□□□ -1.49
CNTNAP3B-205ENST00000476961 CRPP02741 224 aa5.72□□□□□ -1.49
CNTNAP3B-205ENST00000476961 Q75L30 129 aa5.72□□□□□ -1.49
CNTNAP3B-205ENST00000476961 USMG5Q96IX5 58 aa5.72□□□□□ -1.49
CNTNAP3B-205ENST00000476961 TRBV6-5A0A0K0K1A5 114 aa5.72□□□□□ -1.49
CNTNAP3B-205ENST00000476961 INAFM1C9JVW0 142 aa5.71□□□□□ -1.5
CNTNAP3B-205ENST00000476961 C9orf116Q5BN46 136 aaPredicted RBP5.71□□□□□ -1.5
CNTNAP3B-205ENST00000476961 FAM104AQ969W3 186 aa5.71□□□□□ -1.5
CNTNAP3B-205ENST00000476961 LINC00167Q96N53 147 aa5.71□□□□□ -1.5
CNTNAP3B-205ENST00000476961 SORL1Q92673 2214 aa5.71□□□□□ -1.5
CNTNAP3B-205ENST00000476961 IGHV3-38A0A0C4DH36 116 aa5.71□□□□□ -1.5
CNTNAP3B-205ENST00000476961 RNASE1P07998 156 aaKnown RBP5.71□□□□□ -1.5
CNTNAP3B-205ENST00000476961 RPL36AP83881 106 aaKnown RBP5.71□□□□□ -1.5
CNTNAP3B-205ENST00000476961 SUMO4Q6EEV6 95 aa5.71□□□□□ -1.5
CNTNAP3B-205ENST00000476961 RPL36ALQ969Q0 106 aaKnown RBP5.71□□□□□ -1.5
CNTNAP3B-205ENST00000476961 PRAC1Q96KF2 57 aa5.71□□□□□ -1.5
CNTNAP3B-205ENST00000476961 A6NED7 52 aa5.7□□□□□ -1.5
CNTNAP3B-205ENST00000476961 CYSRT1A8MQ03 144 aa5.7□□□□□ -1.5
CNTNAP3B-205ENST00000476961 Q6ZQT0 140 aa5.7□□□□□ -1.5
CNTNAP3B-205ENST00000476961 Q8N9P0 234 aaPredicted RBP5.7□□□□□ -1.5
CNTNAP3B-205ENST00000476961 CDC42SE2Q9NRR3 84 aa5.7□□□□□ -1.5
CNTNAP3B-205ENST00000476961 FN1P02751 2386 aaKnown RBP5.7□□□□□ -1.5
CNTNAP3B-205ENST00000476961 CLPSL1A2RUU4 121 aa5.7□□□□□ -1.5
CNTNAP3B-205ENST00000476961 PRM2P04554 102 aa5.69□□□□□ -1.5
CNTNAP3B-205ENST00000476961 ZNF706Q9Y5V0 76 aaPredicted RBP5.69□□□□□ -1.5
CNTNAP3B-205ENST00000476961 C3orf84H3BNL1 204 aa5.69□□□□□ -1.5
CNTNAP3B-205ENST00000476961 PRR15LQ9BU68 103 aa5.69□□□□□ -1.5
CNTNAP3B-205ENST00000476961 IGKV2-28A0A075B6P5 120 aa5.68□□□□□ -1.5
CNTNAP3B-205ENST00000476961 IGKV2D-28P01615 120 aa5.68□□□□□ -1.5
CNTNAP3B-205ENST00000476961 SETD2Q9BYW2 2564 aaPredicted RBP5.68□□□□□ -1.5
CNTNAP3B-205ENST00000476961 F8P00451 2351 aa5.68□□□□□ -1.5
CNTNAP3B-205ENST00000476961 IGHV3OR16-13A0A075B7E8 117 aa5.68□□□□□ -1.5
CNTNAP3B-205ENST00000476961 LOC110117498A0A087WWA1 95 aa5.68□□□□□ -1.5
CNTNAP3B-205ENST00000476961 IGHV3-74A0A0B4J1X5 117 aa5.68□□□□□ -1.5
CNTNAP3B-205ENST00000476961 IGHV3-66A0A0C4DH42 116 aa5.68□□□□□ -1.5
CNTNAP3B-205ENST00000476961 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.67□□□□□ -1.5
CNTNAP3B-205ENST00000476961 LCE6AA0A183 80 aa5.67□□□□□ -1.5
CNTNAP3B-205ENST00000476961 NDUFA4O00483 81 aa5.67□□□□□ -1.5
CNTNAP3B-205ENST00000476961 IGHV3-49A0A0A0MS15 119 aa5.67□□□□□ -1.5
CNTNAP3B-205ENST00000476961 C6orf99Q4VX62 202 aa5.67□□□□□ -1.5
CNTNAP3B-205ENST00000476961 LINC01006Q8NI28 216 aa5.67□□□□□ -1.5
CNTNAP3B-205ENST00000476961 LOC101927531A0A1B0GV80 90 aa5.66□□□□□ -1.5
CNTNAP3B-205ENST00000476961 M0R2N4 97 aa5.66□□□□□ -1.5
CNTNAP3B-205ENST00000476961 PRR9Q5T870 116 aa5.66□□□□□ -1.5
CNTNAP3B-205ENST00000476961 NANOS2P60321 138 aaKnown RBP5.66□□□□□ -1.5
CNTNAP3B-205ENST00000476961 ZCCHC13Q8WW36 166 aaKnown RBP5.66□□□□□ -1.5
CNTNAP3B-205ENST00000476961 NIPBLQ6KC79 2804 aaeCLIP5.66□□□□□ -1.5
CNTNAP3B-205ENST00000476961 IGLV5-45A0A087WSX0 123 aa5.65□□□□□ -1.5
CNTNAP3B-205ENST00000476961 IGLV5-39A0A0G2JS06 123 aa5.65□□□□□ -1.5
CNTNAP3B-205ENST00000476961 CDKN2A-AS1Q9UH64 79 aa5.65□□□□□ -1.51
CNTNAP3B-205ENST00000476961 RNASE3P12724 160 aaKnown RBP5.64□□□□□ -1.51
CNTNAP3B-205ENST00000476961 DEFB136Q30KP8 78 aa5.64□□□□□ -1.51
CNTNAP3B-205ENST00000476961 SCXQ7RTU7 201 aa5.64□□□□□ -1.51
CNTNAP3B-205ENST00000476961 C4orf3Q8WVX3 66 aa5.64□□□□□ -1.51
CNTNAP3B-205ENST00000476961 C2CD3Q4AC94 2353 aa5.63□□□□□ -1.51
CNTNAP3B-205ENST00000476961 F5H697 171 aa5.63□□□□□ -1.51
CNTNAP3B-205ENST00000476961 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.63□□□□□ -1.51
CNTNAP3B-205ENST00000476961 PLA2G1BP04054 148 aaKnown RBP5.63□□□□□ -1.51
CNTNAP3B-205ENST00000476961 PROK1P58294 105 aa5.63□□□□□ -1.51
CNTNAP3B-205ENST00000476961 SND1-IT1Q9HBX3 110 aa5.63□□□□□ -1.51
CNTNAP3B-205ENST00000476961 TEP1Q99973 2627 aaKnown RBP5.63□□□□□ -1.51
CNTNAP3B-205ENST00000476961 SLURP1P55000 103 aa5.62□□□□□ -1.51
CNTNAP3B-205ENST00000476961 PRR3P79522 188 aaKnown RBP5.62□□□□□ -1.51
CNTNAP3B-205ENST00000476961 Q8N814 137 aa5.62□□□□□ -1.51
CNTNAP3B-205ENST00000476961 RHPN1-AS1Q9BWJ2 59 aa5.62□□□□□ -1.51
CNTNAP3B-205ENST00000476961 M0QY20 66 aa5.62□□□□□ -1.51
CNTNAP3B-205ENST00000476961 LENEPQ9Y5L5 61 aa5.62□□□□□ -1.51
CNTNAP3B-205ENST00000476961 JMJD1CQ15652 2540 aa5.62□□□□□ -1.51
CNTNAP3B-205ENST00000476961 MAST4O15021 2626 aa5.61□□□□□ -1.51
CNTNAP3B-205ENST00000476961 NTM-AS1Q6ZSK4 140 aa5.61□□□□□ -1.51
CNTNAP3B-205ENST00000476961 ADM2Q7Z4H4 148 aa5.61□□□□□ -1.51
CNTNAP3B-205ENST00000476961 KRTAP10-3P60369 221 aa5.61□□□□□ -1.51
CNTNAP3B-205ENST00000476961 C9orf66Q5T8R8 295 aa5.61□□□□□ -1.51
CNTNAP3B-205ENST00000476961 IGKV4-1P06312 121 aa5.61□□□□□ -1.51
CNTNAP3B-205ENST00000476961 DEFB1P60022 68 aa5.61□□□□□ -1.51
CNTNAP3B-205ENST00000476961 PRR4Q16378 134 aa5.6□□□□□ -1.51
CNTNAP3B-205ENST00000476961 ZFAND2AQ8N6M9 145 aa5.6□□□□□ -1.51
CNTNAP3B-205ENST00000476961 IGHV6-1A0A0B4J1U7 121 aa5.6□□□□□ -1.51
CNTNAP3B-205ENST00000476961 PDE6GP18545 87 aa5.6□□□□□ -1.51
CNTNAP3B-205ENST00000476961 RETNLBQ9BQ08 111 aa5.6□□□□□ -1.51
CNTNAP3B-205ENST00000476961 TENM1Q9UKZ4 2725 aa5.6□□□□□ -1.51
CNTNAP3B-205ENST00000476961 IGKV3-7A0A075B6H7 116 aa5.59□□□□□ -1.51
CNTNAP3B-205ENST00000476961 ELOF1P60002 83 aaKnown RBP5.59□□□□□ -1.51
CNTNAP3B-205ENST00000476961 CELA1Q9UNI1 258 aa5.59□□□□□ -1.52
CNTNAP3B-205ENST00000476961 PRB2P02812 416 aaPredicted RBP5.58□□□□□ -1.52
CNTNAP3B-205ENST00000476961 ASB16-AS1Q495Z4 193 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms