RNA–Protein interactions for RNA: ENST00000476930.1

PTPRN-213, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-213ENST00000476930 IGKV2D-28P01615 120 aa6.62□□□□□ -1.35
PTPRN-213ENST00000476930 VPREB1P12018 145 aa6.62□□□□□ -1.35
PTPRN-213ENST00000476930 RPL13AP40429 203 aaKnown RBP6.62□□□□□ -1.35
PTPRN-213ENST00000476930 KRTAP13-1Q8IUC0 172 aa6.62□□□□□ -1.35
PTPRN-213ENST00000476930 Q8NDZ9 215 aa6.62□□□□□ -1.35
PTPRN-213ENST00000476930 CHCHD1Q96BP2 118 aaKnown RBP6.62□□□□□ -1.35
PTPRN-213ENST00000476930 A0A087X002 238 aa6.61□□□□□ -1.35
PTPRN-213ENST00000476930 COX17Q14061 63 aa6.61□□□□□ -1.35
PTPRN-213ENST00000476930 IFI27L1Q96BM0 104 aa6.61□□□□□ -1.35
PTPRN-213ENST00000476930 ANAPC11Q9NYG5 84 aa6.61□□□□□ -1.35
PTPRN-213ENST00000476930 TRAV12-1A0A0B4J245 112 aa6.6□□□□□ -1.35
PTPRN-213ENST00000476930 TMEM223A0PJW6 202 aa6.6□□□□□ -1.35
PTPRN-213ENST00000476930 FAM19A2Q8N3H0 131 aa6.6□□□□□ -1.35
PTPRN-213ENST00000476930 A0A0U1RRA0 63 aa6.59□□□□□ -1.35
PTPRN-213ENST00000476930 TMEM238C9JI98 176 aa6.59□□□□□ -1.35
PTPRN-213ENST00000476930 UBE2AP49459 152 aa6.59□□□□□ -1.35
PTPRN-213ENST00000476930 HSBP1O75506 76 aa6.58□□□□□ -1.36
PTPRN-213ENST00000476930 TRGC2P03986 189 aa6.58□□□□□ -1.36
PTPRN-213ENST00000476930 LINC00158P58513 81 aa6.58□□□□□ -1.36
PTPRN-213ENST00000476930 RPL24P83731 157 aaKnown RBP6.58□□□□□ -1.36
PTPRN-213ENST00000476930 TSPAN13O95857 204 aa6.57□□□□□ -1.36
PTPRN-213ENST00000476930 CRYGAP11844 174 aa6.57□□□□□ -1.36
PTPRN-213ENST00000476930 PRLHP81277 87 aa6.57□□□□□ -1.36
PTPRN-213ENST00000476930 SFTA2Q6UW10 78 aa6.57□□□□□ -1.36
PTPRN-213ENST00000476930 SLC7A5P1Q8MH63 180 aa6.57□□□□□ -1.36
PTPRN-213ENST00000476930 TMEM126AQ9H061 195 aa6.57□□□□□ -1.36
PTPRN-213ENST00000476930 H0Y8G0 127 aa6.56□□□□□ -1.36
PTPRN-213ENST00000476930 M0R378 163 aa6.56□□□□□ -1.36
PTPRN-213ENST00000476930 SMIM13P0DJ93 91 aa6.56□□□□□ -1.36
PTPRN-213ENST00000476930 LINC00310P59036 64 aa6.56□□□□□ -1.36
PTPRN-213ENST00000476930 PRR4Q16378 134 aa6.56□□□□□ -1.36
PTPRN-213ENST00000476930 KRTAP13-2Q52LG2 175 aa6.56□□□□□ -1.36
PTPRN-213ENST00000476930 FAM19A1Q7Z5A9 133 aa6.56□□□□□ -1.36
PTPRN-213ENST00000476930 TYMSOSQ8TAI1 123 aa6.56□□□□□ -1.36
PTPRN-213ENST00000476930 MUC2Q02817 5179 aa6.56□□□□□ -1.36
PTPRN-213ENST00000476930 SERF1AO75920 110 aa6.55□□□□□ -1.36
PTPRN-213ENST00000476930 CDIP1Q9H305 208 aa6.54□□□□□ -1.36
PTPRN-213ENST00000476930 LEPROTL1O95214 131 aa6.53□□□□□ -1.36
PTPRN-213ENST00000476930 MEIG1Q5JSS6 88 aa6.53□□□□□ -1.36
PTPRN-213ENST00000476930 TSPEAR-AS2P59090 65 aa6.52□□□□□ -1.37
PTPRN-213ENST00000476930 FAM229BQ4G0N7 80 aa6.52□□□□□ -1.37
PTPRN-213ENST00000476930 BOD1L2Q8IYS8 172 aa6.52□□□□□ -1.37
PTPRN-213ENST00000476930 MIR7-3HGQ8N6C7 128 aa6.52□□□□□ -1.37
PTPRN-213ENST00000476930 NDUFA12Q9UI09 145 aa6.52□□□□□ -1.37
PTPRN-213ENST00000476930 MUC17Q685J3 4493 aa6.51□□□□□ -1.37
PTPRN-213ENST00000476930 COLCA2A8K830 154 aa6.51□□□□□ -1.37
PTPRN-213ENST00000476930 NCR3O14931 201 aa6.51□□□□□ -1.37
PTPRN-213ENST00000476930 ATP6V1G1O75348 118 aa6.51□□□□□ -1.37
PTPRN-213ENST00000476930 FABP4P15090 132 aa6.51□□□□□ -1.37
PTPRN-213ENST00000476930 HERV-K104P63124 156 aa6.51□□□□□ -1.37
PTPRN-213ENST00000476930 PLEKHB2Q96CS7 222 aa6.51□□□□□ -1.37
PTPRN-213ENST00000476930 PMCHL2Q9BQD1 86 aa6.51□□□□□ -1.37
PTPRN-213ENST00000476930 HIGD2AQ9BW72 106 aa6.5□□□□□ -1.37
PTPRN-213ENST00000476930 IGKV2D-26A0A0A0MRZ7 120 aa6.49□□□□□ -1.37
PTPRN-213ENST00000476930 MYMXA0A1B0GTQ4 84 aa6.49□□□□□ -1.37
PTPRN-213ENST00000476930 LEPROTO15243 131 aa6.49□□□□□ -1.37
PTPRN-213ENST00000476930 DAND5Q8N907 189 aa6.49□□□□□ -1.37
PTPRN-213ENST00000476930 PLNP26678 52 aa6.48□□□□□ -1.37
PTPRN-213ENST00000476930 C3orf22Q8N5N4 141 aa6.48□□□□□ -1.37
PTPRN-213ENST00000476930 LINC00304Q8N9R0 145 aa6.48□□□□□ -1.37
PTPRN-213ENST00000476930 HSPB8Q9UJY1 196 aa6.48□□□□□ -1.37
PTPRN-213ENST00000476930 TRBV10-3A0A0K0K1G6 114 aa6.47□□□□□ -1.37
PTPRN-213ENST00000476930 LINC00587B1AMM8 73 aa6.47□□□□□ -1.37
PTPRN-213ENST00000476930 J3QQQ9 107 aa6.47□□□□□ -1.37
PTPRN-213ENST00000476930 PRYO14603 147 aa6.47□□□□□ -1.37
PTPRN-213ENST00000476930 DPM2O94777 84 aa6.47□□□□□ -1.37
PTPRN-213ENST00000476930 RETNLBQ9BQ08 111 aa6.47□□□□□ -1.37
PTPRN-213ENST00000476930 KCNQ1DNQ9H478 68 aa6.47□□□□□ -1.37
PTPRN-213ENST00000476930 KRTAP4-16G5E9R7 235 aaPredicted RBP6.46□□□□□ -1.38
PTPRN-213ENST00000476930 IGKCP01834 107 aa6.46□□□□□ -1.38
PTPRN-213ENST00000476930 SPRR1AP35321 89 aa6.46□□□□□ -1.38
PTPRN-213ENST00000476930 SPRR4Q96PI1 79 aa6.46□□□□□ -1.38
PTPRN-213ENST00000476930 MAP1LC3CQ9BXW4 147 aa6.46□□□□□ -1.38
PTPRN-213ENST00000476930 LOC107984156A0A0G2JMH3 177 aa6.45□□□□□ -1.38
PTPRN-213ENST00000476930 ARL17AQ8IVW1 177 aa6.45□□□□□ -1.38
PTPRN-213ENST00000476930 LINC00337Q8N6G1 96 aa6.45□□□□□ -1.38
PTPRN-213ENST00000476930 LGALS3P17931 250 aaKnown RBP6.44□□□□□ -1.38
PTPRN-213ENST00000476930 HERVK_113P61574 105 aa6.44□□□□□ -1.38
PTPRN-213ENST00000476930 SMCR5Q8TEV8 140 aa6.44□□□□□ -1.38
PTPRN-213ENST00000476930 ETDCA0A1B0GVM5 59 aa6.43□□□□□ -1.38
PTPRN-213ENST00000476930 NMUP48645 174 aa6.43□□□□□ -1.38
PTPRN-213ENST00000476930 PPDPFQ9H3Y8 114 aa6.43□□□□□ -1.38
PTPRN-213ENST00000476930 FAT4Q6V0I7 4981 aa6.42□□□□□ -1.38
PTPRN-213ENST00000476930 HIST1H2BKO60814 126 aa6.42□□□□□ -1.38
PTPRN-213ENST00000476930 HIST1H2BJP06899 126 aa6.42□□□□□ -1.38
PTPRN-213ENST00000476930 HIST1H2BOP23527 126 aa6.42□□□□□ -1.38
PTPRN-213ENST00000476930 DDTP30046 118 aa6.42□□□□□ -1.38
PTPRN-213ENST00000476930 HIST1H2BBP33778 126 aa6.42□□□□□ -1.38
PTPRN-213ENST00000476930 HIST1H2BDP58876 126 aa6.42□□□□□ -1.38
PTPRN-213ENST00000476930 HIST1H2BCP62807 126 aa6.42□□□□□ -1.38
PTPRN-213ENST00000476930 HIST2H2BEQ16778 126 aa6.42□□□□□ -1.38
PTPRN-213ENST00000476930 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.42□□□□□ -1.38
PTPRN-213ENST00000476930 HIST1H2BHQ93079 126 aa6.42□□□□□ -1.38
PTPRN-213ENST00000476930 HIST1H2BNQ99877 126 aa6.42□□□□□ -1.38
PTPRN-213ENST00000476930 HIST1H2BMQ99879 126 aa6.42□□□□□ -1.38
PTPRN-213ENST00000476930 A0A0J9YXY3 114 aa6.41□□□□□ -1.38
PTPRN-213ENST00000476930 TRBV10-2A0A0K0K1G8 114 aa6.41□□□□□ -1.38
PTPRN-213ENST00000476930 B5MCH6 92 aa6.41□□□□□ -1.38
PTPRN-213ENST00000476930 NPC2P61916 151 aa6.41□□□□□ -1.38
PTPRN-213ENST00000476930 ADAMTSL4-AS1Q5T5F5 129 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms