RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 LOC100131303A0A0U1RQF7 123 aa5.82□□□□□ -1.48
VAPB-205ENST00000476395 C19orf73Q9NVV2 129 aa5.82□□□□□ -1.48
VAPB-205ENST00000476395 ANK2Q01484 3957 aa5.82□□□□□ -1.48
VAPB-205ENST00000476395 INSP01308 110 aa5.82□□□□□ -1.48
VAPB-205ENST00000476395 ESM1Q9NQ30 184 aa5.82□□□□□ -1.48
VAPB-205ENST00000476395 CSNK1G2-AS1Q8NCQ2 148 aa5.81□□□□□ -1.48
VAPB-205ENST00000476395 CCKP06307 115 aa5.81□□□□□ -1.48
VAPB-205ENST00000476395 WFDC10AQ9H1F0 79 aa5.81□□□□□ -1.48
VAPB-205ENST00000476395 FAM229BQ4G0N7 80 aa5.81□□□□□ -1.48
VAPB-205ENST00000476395 HIVEP2P31629 2446 aa5.81□□□□□ -1.48
VAPB-205ENST00000476395 F8WEM9 126 aa5.8□□□□□ -1.48
VAPB-205ENST00000476395 KTN1-AS1Q86SY8 53 aa5.8□□□□□ -1.48
VAPB-205ENST00000476395 K7EQD1 137 aa5.8□□□□□ -1.48
VAPB-205ENST00000476395 MAST4O15021 2626 aa5.8□□□□□ -1.48
VAPB-205ENST00000476395 SCXQ7RTU7 201 aa5.8□□□□□ -1.48
VAPB-205ENST00000476395 TRBV7-6A0A0J9YX20 115 aa5.79□□□□□ -1.48
VAPB-205ENST00000476395 UBE2L6O14933 153 aa5.79□□□□□ -1.48
VAPB-205ENST00000476395 ORMDL1Q9P0S3 153 aa5.79□□□□□ -1.48
VAPB-205ENST00000476395 TRGV1A0A0A0MS02 117 aa5.79□□□□□ -1.48
VAPB-205ENST00000476395 EPM2AB3EWF7 344 aa5.79□□□□□ -1.48
VAPB-205ENST00000476395 SMR3AQ99954 134 aa5.79□□□□□ -1.48
VAPB-205ENST00000476395 F8P00451 2351 aa5.79□□□□□ -1.48
VAPB-205ENST00000476395 MDFIQ99750 246 aa5.78□□□□□ -1.48
VAPB-205ENST00000476395 TRRAPQ9Y4A5 3859 aa5.78□□□□□ -1.48
VAPB-205ENST00000476395 IGLV4-60A0A075B6I1 120 aa5.78□□□□□ -1.48
VAPB-205ENST00000476395 COX7B2Q8TF08 81 aa5.78□□□□□ -1.48
VAPB-205ENST00000476395 LINC00528Q8N1L1 170 aa5.78□□□□□ -1.48
VAPB-205ENST00000476395 TMEM256-PLSCR3K7ERE1 68 aa5.77□□□□□ -1.49
VAPB-205ENST00000476395 C6orf223Q8N319 242 aa5.77□□□□□ -1.49
VAPB-205ENST00000476395 TRBV10-1A0A0K0K1A3 114 aa5.77□□□□□ -1.49
VAPB-205ENST00000476395 KRTAP1-1Q07627 177 aa5.77□□□□□ -1.49
VAPB-205ENST00000476395 HAMPP81172 84 aa5.77□□□□□ -1.49
VAPB-205ENST00000476395 TM2D3Q9BRN9 247 aa5.77□□□□□ -1.49
VAPB-205ENST00000476395 NOP10Q9NPE3 64 aaKnown RBP5.77□□□□□ -1.49
VAPB-205ENST00000476395 NANOS2P60321 138 aaKnown RBP5.76□□□□□ -1.49
VAPB-205ENST00000476395 ATRQ13535 2644 aa5.76□□□□□ -1.49
VAPB-205ENST00000476395 IGHV3OR16-9A0A0B4J2B5 98 aa5.76□□□□□ -1.49
VAPB-205ENST00000476395 DNAJC9-AS1A6NH13 148 aa5.76□□□□□ -1.49
VAPB-205ENST00000476395 NSD1Q96L73 2696 aaPredicted RBP5.76□□□□□ -1.49
VAPB-205ENST00000476395 DYNLRB2Q8TF09 96 aa5.76□□□□□ -1.49
VAPB-205ENST00000476395 H0YGX0 51 aa5.75□□□□□ -1.49
VAPB-205ENST00000476395 Q8NDZ9 215 aa5.75□□□□□ -1.49
VAPB-205ENST00000476395 OVOL2Q9BRP0 275 aa5.75□□□□□ -1.49
VAPB-205ENST00000476395 CMYA5Q8N3K9 4069 aa5.75□□□□□ -1.49
VAPB-205ENST00000476395 ZNF73O43830 326 aaPredicted RBP5.75□□□□□ -1.49
VAPB-205ENST00000476395 CLPSL2Q6UWE3 100 aa5.74□□□□□ -1.49
VAPB-205ENST00000476395 TENM1Q9UKZ4 2725 aa5.74□□□□□ -1.49
VAPB-205ENST00000476395 NDUFS5O43920 106 aa5.74□□□□□ -1.49
VAPB-205ENST00000476395 Q8N814 137 aa5.74□□□□□ -1.49
VAPB-205ENST00000476395 UBL5Q9BZL1 73 aa5.74□□□□□ -1.49
VAPB-205ENST00000476395 LINC01547P58512 204 aaPredicted RBP5.73□□□□□ -1.49
VAPB-205ENST00000476395 TRBV6-4A0A1B0GX49 114 aa5.73□□□□□ -1.49
VAPB-205ENST00000476395 M0R378 163 aa5.73□□□□□ -1.49
VAPB-205ENST00000476395 Q8N9L7 120 aa5.73□□□□□ -1.49
VAPB-205ENST00000476395 C9orf116Q5BN46 136 aaPredicted RBP5.73□□□□□ -1.49
VAPB-205ENST00000476395 TRAV7A0A075B6U4 112 aa5.72□□□□□ -1.49
VAPB-205ENST00000476395 LRCOL1A6NCL2 159 aa5.72□□□□□ -1.49
VAPB-205ENST00000476395 KLKP1Q107X0 134 aa5.72□□□□□ -1.49
VAPB-205ENST00000476395 A0A087WZ39 114 aa5.72□□□□□ -1.49
VAPB-205ENST00000476395 IGLV1-51P01701 117 aa5.72□□□□□ -1.49
VAPB-205ENST00000476395 Q8N3U1 123 aa5.72□□□□□ -1.49
VAPB-205ENST00000476395 KRTAP10-3P60369 221 aa5.71□□□□□ -1.49
VAPB-205ENST00000476395 Q6ZVQ6 151 aa5.71□□□□□ -1.49
VAPB-205ENST00000476395 LINC00612Q8N6U2 182 aa5.71□□□□□ -1.49
VAPB-205ENST00000476395 DNAH1Q9P2D7 4330 aa5.71□□□□□ -1.5
VAPB-205ENST00000476395 TRBV6-8A0A0A6YYG3 113 aa5.71□□□□□ -1.5
VAPB-205ENST00000476395 LY6G6DO95868 133 aa5.71□□□□□ -1.5
VAPB-205ENST00000476395 C6orf99Q4VX62 202 aa5.71□□□□□ -1.5
VAPB-205ENST00000476395 LINC01006Q8NI28 216 aa5.71□□□□□ -1.5
VAPB-205ENST00000476395 CYSRT1A8MQ03 144 aa5.7□□□□□ -1.5
VAPB-205ENST00000476395 Q6ZQT0 140 aa5.7□□□□□ -1.5
VAPB-205ENST00000476395 C16orf74Q96GX8 76 aa5.7□□□□□ -1.5
VAPB-205ENST00000476395 JMJD7-PLA2G4BH0Y9G9 81 aa5.69□□□□□ -1.5
VAPB-205ENST00000476395 FUSP35637 526 aaKnown RBP eCLIP5.69□□□□□ -1.5
VAPB-205ENST00000476395 ATP5EP2Q5VTU8 51 aa5.69□□□□□ -1.5
VAPB-205ENST00000476395 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.69□□□□□ -1.5
VAPB-205ENST00000476395 A8MUN3 132 aa5.69□□□□□ -1.5
VAPB-205ENST00000476395 IBA57-AS1B1ANH7 110 aa5.69□□□□□ -1.5
VAPB-205ENST00000476395 LINC00959A0A1B0GUT2 108 aa5.68□□□□□ -1.5
VAPB-205ENST00000476395 LINC00167Q96N53 147 aa5.68□□□□□ -1.5
VAPB-205ENST00000476395 TRBV7-4A0A0J9YYF1 115 aa5.68□□□□□ -1.5
VAPB-205ENST00000476395 KRTAP3-3Q9BYR6 98 aa5.68□□□□□ -1.5
VAPB-205ENST00000476395 KRTAP3-2Q9BYR7 98 aa5.68□□□□□ -1.5
VAPB-205ENST00000476395 ATP5EP56381 51 aaPredicted RBP5.68□□□□□ -1.5
VAPB-205ENST00000476395 KIAA0087Q14695 138 aa5.68□□□□□ -1.5
VAPB-205ENST00000476395 MIFP14174 115 aa5.67□□□□□ -1.5
VAPB-205ENST00000476395 X6R8D5 127 aa5.67□□□□□ -1.5
VAPB-205ENST00000476395 A0A096LPF7 62 aa5.66□□□□□ -1.5
VAPB-205ENST00000476395 LCA10Q71F78 164 aa5.66□□□□□ -1.5
VAPB-205ENST00000476395 TRGV2A0A075B6R0 118 aa5.66□□□□□ -1.5
VAPB-205ENST00000476395 TRBV10-3A0A0K0K1G6 114 aa5.66□□□□□ -1.5
VAPB-205ENST00000476395 UBE2BP63146 152 aa5.66□□□□□ -1.5
VAPB-205ENST00000476395 SPTSSBQ8NFR3 76 aa5.66□□□□□ -1.5
VAPB-205ENST00000476395 DNAH3Q8TD57 4116 aa5.66□□□□□ -1.5
VAPB-205ENST00000476395 PRB2P02812 416 aaPredicted RBP5.66□□□□□ -1.5
VAPB-205ENST00000476395 STAB1Q9NY15 2570 aa5.65□□□□□ -1.5
VAPB-205ENST00000476395 IGLV10-54A0A075B6I4 117 aa5.65□□□□□ -1.5
VAPB-205ENST00000476395 PKD1L1Q8TDX9 2849 aa5.65□□□□□ -1.5
VAPB-205ENST00000476395 A8MU10 97 aa5.65□□□□□ -1.51
VAPB-205ENST00000476395 NREPQ16612 68 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms