RNA–Protein interactions for RNA: ENST00000476074.5

PCDH15-222, Transcript of protocadherin related 15, human

TSL 3

Gene PCDH15, Length 754 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-222	ENST00000476074	TMEM86B	Q8N661	226 aa		3.6	□□□□□ -1.83
PCDH15-222	ENST00000476074	MUC7	Q8TAX7	377 aa		3.6	□□□□□ -1.83
PCDH15-222	ENST00000476074	SMG1	Q96Q15	3661 aa	Known RBP	3.59	□□□□□ -1.83
PCDH15-222	ENST00000476074		A0A096LNT2	108 aa		3.59	□□□□□ -1.83
PCDH15-222	ENST00000476074	COX17	Q14061	63 aa		3.59	□□□□□ -1.83
PCDH15-222	ENST00000476074		Q8IZM0	81 aa		3.59	□□□□□ -1.83
PCDH15-222	ENST00000476074	KALRN	O60229	2985 aa		3.59	□□□□□ -1.84
PCDH15-222	ENST00000476074	SPTAN1	Q13813	2472 aa	Known RBP	3.59	□□□□□ -1.84
PCDH15-222	ENST00000476074	USP9X	Q93008	2570 aa	Predicted RBP	3.58	□□□□□ -1.84
PCDH15-222	ENST00000476074	FLNC	Q14315	2725 aa		3.58	□□□□□ -1.84
PCDH15-222	ENST00000476074	PTPN13	Q12923	2485 aa		3.58	□□□□□ -1.84
PCDH15-222	ENST00000476074	TRBV7-4	A0A0J9YYF1	115 aa		3.58	□□□□□ -1.84
PCDH15-222	ENST00000476074	MSMB	P08118	114 aa		3.58	□□□□□ -1.84
PCDH15-222	ENST00000476074	HTN1	P15515	57 aa		3.58	□□□□□ -1.84
PCDH15-222	ENST00000476074	LINC00575	Q6W349	94 aa		3.58	□□□□□ -1.84
PCDH15-222	ENST00000476074	C1orf158	Q8N1D5	194 aa		3.58	□□□□□ -1.84
PCDH15-222	ENST00000476074	SPATA3	Q8NHX4	192 aa		3.58	□□□□□ -1.84
PCDH15-222	ENST00000476074	NACA	E9PAV3	2078 aa		3.58	□□□□□ -1.84
PCDH15-222	ENST00000476074	TRGV1	A0A0A0MS02	117 aa		3.57	□□□□□ -1.84
PCDH15-222	ENST00000476074	TRBV7-6	A0A0J9YX20	115 aa		3.57	□□□□□ -1.84
PCDH15-222	ENST00000476074	UBR5	O95071	2799 aa	Predicted RBP	3.57	□□□□□ -1.84
PCDH15-222	ENST00000476074	ABCA4	P78363	2273 aa		3.57	□□□□□ -1.84
PCDH15-222	ENST00000476074	RBM3	P98179	157 aa	Known RBP	3.57	□□□□□ -1.84
PCDH15-222	ENST00000476074	WFDC9	Q8NEX5	89 aa		3.57	□□□□□ -1.84
PCDH15-222	ENST00000476074	USP9Y	O00507	2555 aa	Predicted RBP	3.57	□□□□□ -1.84
PCDH15-222	ENST00000476074	ANKHD1	Q8IWZ3	2542 aa	Known RBP	3.56	□□□□□ -1.84
PCDH15-222	ENST00000476074	TENM4	Q6N022	2769 aa		3.56	□□□□□ -1.84
PCDH15-222	ENST00000476074	TRBV6-8	A0A0A6YYG3	113 aa		3.56	□□□□□ -1.84
PCDH15-222	ENST00000476074	LOC100131303	A0A0U1RQF7	123 aa		3.56	□□□□□ -1.84
PCDH15-222	ENST00000476074	LINC00959	A0A1B0GUT2	108 aa		3.56	□□□□□ -1.84
PCDH15-222	ENST00000476074		F8WEM9	126 aa		3.56	□□□□□ -1.84
PCDH15-222	ENST00000476074	PRM2	P04554	102 aa		3.56	□□□□□ -1.84
PCDH15-222	ENST00000476074	MIF	P14174	115 aa		3.56	□□□□□ -1.84
PCDH15-222	ENST00000476074		Q6ZTI0	123 aa		3.56	□□□□□ -1.84
PCDH15-222	ENST00000476074	C16orf74	Q96GX8	76 aa		3.56	□□□□□ -1.84
PCDH15-222	ENST00000476074	ZNF702P	Q9H963	129 aa		3.56	□□□□□ -1.84
PCDH15-222	ENST00000476074	TOMM7	Q9P0U1	55 aa		3.56	□□□□□ -1.84
PCDH15-222	ENST00000476074	DOPEY1	Q5JWR5	2465 aa		3.56	□□□□□ -1.84
PCDH15-222	ENST00000476074	ROS1	P08922	2347 aa		3.56	□□□□□ -1.84
PCDH15-222	ENST00000476074	RELN	P78509	3460 aa		3.56	□□□□□ -1.84
PCDH15-222	ENST00000476074	WNK2	Q9Y3S1	2297 aa		3.55	□□□□□ -1.84
PCDH15-222	ENST00000476074	TRAV10	A0A0B4J240	114 aa		3.55	□□□□□ -1.84
PCDH15-222	ENST00000476074		B4DSR2	109 aa		3.55	□□□□□ -1.84
PCDH15-222	ENST00000476074	CMC4	P56277	68 aa	Predicted RBP	3.55	□□□□□ -1.84
PCDH15-222	ENST00000476074	DEFB114	Q30KQ6	69 aa		3.55	□□□□□ -1.84
PCDH15-222	ENST00000476074	HIGD2B	Q4VC39	106 aa		3.55	□□□□□ -1.84
PCDH15-222	ENST00000476074	C6orf226	Q5I0X4	101 aa		3.55	□□□□□ -1.84
PCDH15-222	ENST00000476074	REG3G	Q6UW15	175 aa		3.55	□□□□□ -1.84
PCDH15-222	ENST00000476074	C10orf99	Q6UWK7	81 aa		3.55	□□□□□ -1.84
PCDH15-222	ENST00000476074	C4orf3	Q8WVX3	66 aa		3.55	□□□□□ -1.84
PCDH15-222	ENST00000476074	RMI2	Q96E14	147 aa		3.55	□□□□□ -1.84
PCDH15-222	ENST00000476074	LAMTOR3	Q9UHA4	124 aa		3.55	□□□□□ -1.84
PCDH15-222	ENST00000476074	LRRK2	Q5S007	2527 aa		3.55	□□□□□ -1.84
PCDH15-222	ENST00000476074	SPEN	Q96T58	3664 aa	Known RBP	3.55	□□□□□ -1.84
PCDH15-222	ENST00000476074	IGLV4-60	A0A075B6I1	120 aa		3.54	□□□□□ -1.84
PCDH15-222	ENST00000476074		A0A0U1RQV1	116 aa		3.54	□□□□□ -1.84
PCDH15-222	ENST00000476074	PLAC8L1	A1L4L8	177 aa		3.54	□□□□□ -1.84
PCDH15-222	ENST00000476074	KIAA0087	Q14695	138 aa		3.54	□□□□□ -1.84
PCDH15-222	ENST00000476074	NREP	Q16612	68 aa		3.54	□□□□□ -1.84
PCDH15-222	ENST00000476074	DEFB112	Q30KQ8	113 aa		3.54	□□□□□ -1.84
PCDH15-222	ENST00000476074	TMEM254	Q8TBM7	123 aa		3.54	□□□□□ -1.84
PCDH15-222	ENST00000476074	DYNLRB2	Q8TF09	96 aa		3.54	□□□□□ -1.84
PCDH15-222	ENST00000476074	IGLV6-57	P01721	117 aa		3.53	□□□□□ -1.84
PCDH15-222	ENST00000476074	C6orf99	Q4VX62	202 aa		3.53	□□□□□ -1.84
PCDH15-222	ENST00000476074	C1orf195	Q5TG92	126 aa		3.53	□□□□□ -1.84
PCDH15-222	ENST00000476074	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	3.53	□□□□□ -1.84
PCDH15-222	ENST00000476074	SNURF	Q9Y675	71 aa		3.53	□□□□□ -1.84
PCDH15-222	ENST00000476074		V9GYY9	64 aa		3.53	□□□□□ -1.84
PCDH15-222	ENST00000476074	MED13L	Q71F56	2210 aa		3.53	□□□□□ -1.84
PCDH15-222	ENST00000476074	AKAP6	Q13023	2319 aa		3.53	□□□□□ -1.84
PCDH15-222	ENST00000476074	UTP20	O75691	2785 aa	Known RBP	3.52	□□□□□ -1.85
PCDH15-222	ENST00000476074	LCE6A	A0A183	80 aa		3.52	□□□□□ -1.85
PCDH15-222	ENST00000476074	C19orf84	I3L1E1	186 aa		3.52	□□□□□ -1.85
PCDH15-222	ENST00000476074	HAMP	P81172	84 aa		3.52	□□□□□ -1.85
PCDH15-222	ENST00000476074	ESRG	Q1W209	222 aa		3.52	□□□□□ -1.85
PCDH15-222	ENST00000476074	LINC00612	Q8N6U2	182 aa		3.52	□□□□□ -1.85
PCDH15-222	ENST00000476074	CCL19	Q99731	98 aa		3.52	□□□□□ -1.85
PCDH15-222	ENST00000476074	TM2D3	Q9BRN9	247 aa		3.52	□□□□□ -1.85
PCDH15-222	ENST00000476074	DHRS4-AS1	Q9P1J3	65 aa		3.52	□□□□□ -1.85
PCDH15-222	ENST00000476074	TRGV2	A0A075B6R0	118 aa		3.51	□□□□□ -1.85
PCDH15-222	ENST00000476074	GVQW2	A0A096LPI5	108 aa	Predicted RBP	3.51	□□□□□ -1.85
PCDH15-222	ENST00000476074	TRGV4	A0A0C4DH28	118 aa		3.51	□□□□□ -1.85
PCDH15-222	ENST00000476074		A0A1B0GW54	56 aa		3.51	□□□□□ -1.85
PCDH15-222	ENST00000476074		M0R2N4	97 aa		3.51	□□□□□ -1.85
PCDH15-222	ENST00000476074	BPY2	O14599	106 aa		3.51	□□□□□ -1.85
PCDH15-222	ENST00000476074	GIG44	P09565	113 aa	Predicted RBP	3.51	□□□□□ -1.85
PCDH15-222	ENST00000476074	COX7B	P24311	80 aa		3.51	□□□□□ -1.85
PCDH15-222	ENST00000476074	PRR15	Q8IV56	129 aa		3.51	□□□□□ -1.85
PCDH15-222	ENST00000476074	WFDC11	Q8NEX6	87 aa		3.51	□□□□□ -1.85
PCDH15-222	ENST00000476074	NOP10	Q9NPE3	64 aa	Known RBP	3.51	□□□□□ -1.85
PCDH15-222	ENST00000476074	LINC00474	Q9P2X8	69 aa		3.51	□□□□□ -1.85
PCDH15-222	ENST00000476074	CELA1	Q9UNI1	258 aa		3.51	□□□□□ -1.85
PCDH15-222	ENST00000476074	FLNB	O75369	2602 aa	Known RBP	3.51	□□□□□ -1.85
PCDH15-222	ENST00000476074	HECTD1	Q9ULT8	2610 aa		3.51	□□□□□ -1.85
PCDH15-222	ENST00000476074	NAV2	Q8IVL1	2488 aa		3.5	□□□□□ -1.85
PCDH15-222	ENST00000476074	ANKRD17	O75179	2603 aa	Known RBP	3.5	□□□□□ -1.85
PCDH15-222	ENST00000476074	SPG11	Q96JI7	2443 aa		3.5	□□□□□ -1.85
PCDH15-222	ENST00000476074	ABCA2	Q9BZC7	2435 aa		3.5	□□□□□ -1.85
PCDH15-222	ENST00000476074	CYSRT1	A8MQ03	144 aa		3.5	□□□□□ -1.85
PCDH15-222	ENST00000476074	FUS	P35637	526 aa	Known RBP eCLIP	3.5	□□□□□ -1.85

Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms