RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 C1orf43Q9BWL3 253 aa12.04□□□□□ -0.48
ATG4B-217ENST00000475693 IGLV5-39A0A0G2JS06 123 aa12.03□□□□□ -0.48
ATG4B-217ENST00000475693 COX7A2LO14548 114 aa12.03□□□□□ -0.48
ATG4B-217ENST00000475693 PPDPFQ9H3Y8 114 aa12.03□□□□□ -0.48
ATG4B-217ENST00000475693 NBDYA0A0U1RRE5 68 aa12.02□□□□□ -0.49
ATG4B-217ENST00000475693 MALP21145 153 aa12.02□□□□□ -0.49
ATG4B-217ENST00000475693 NDUFV3P56181 108 aaKnown RBP12.02□□□□□ -0.49
ATG4B-217ENST00000475693 ZNF625Q96I27 306 aaPredicted RBP12.02□□□□□ -0.49
ATG4B-217ENST00000475693 C3orf84H3BNL1 204 aa12.01□□□□□ -0.49
ATG4B-217ENST00000475693 LECT2O14960 151 aa12.01□□□□□ -0.49
ATG4B-217ENST00000475693 SACSQ9NZJ4 4579 aa12□□□□□ -0.49
ATG4B-217ENST00000475693 C6orf223Q8N319 242 aa12□□□□□ -0.49
ATG4B-217ENST00000475693 HIGD2BQ4VC39 106 aa11.99□□□□□ -0.49
ATG4B-217ENST00000475693 ALMS1Q8TCU4 4167 aa11.99□□□□□ -0.49
ATG4B-217ENST00000475693 TTC32Q5I0X7 151 aa11.99□□□□□ -0.49
ATG4B-217ENST00000475693 LINC00476Q8WZB0 136 aa11.98□□□□□ -0.49
ATG4B-217ENST00000475693 LINC00308Q8TCZ7 52 aa11.98□□□□□ -0.49
ATG4B-217ENST00000475693 COX7B2Q8TF08 81 aa11.98□□□□□ -0.49
ATG4B-217ENST00000475693 CLEC2BQ92478 149 aa11.98□□□□□ -0.49
ATG4B-217ENST00000475693 ACYP1P07311 99 aa11.96□□□□□ -0.49
ATG4B-217ENST00000475693 KIAA0087Q14695 138 aa11.96□□□□□ -0.49
ATG4B-217ENST00000475693 C15orf56Q8N910 161 aa11.96□□□□□ -0.49
ATG4B-217ENST00000475693 A0A0U1RRA0 63 aa11.95□□□□□ -0.5
ATG4B-217ENST00000475693 NPC2P61916 151 aa11.95□□□□□ -0.5
ATG4B-217ENST00000475693 C6orf226Q5I0X4 101 aa11.95□□□□□ -0.5
ATG4B-217ENST00000475693 KMT2CQ8NEZ4 4911 aaKnown RBP11.95□□□□□ -0.5
ATG4B-217ENST00000475693 HERV-K104P63124 156 aa11.94□□□□□ -0.5
ATG4B-217ENST00000475693 TRBV7-7A0A0K0K1E9 115 aa11.94□□□□□ -0.5
ATG4B-217ENST00000475693 C10orf25Q5T742 122 aa11.93□□□□□ -0.5
ATG4B-217ENST00000475693 SPAG11BQ08648 103 aa11.92□□□□□ -0.5
ATG4B-217ENST00000475693 TRACP01848 142 aa11.92□□□□□ -0.5
ATG4B-217ENST00000475693 SS18L2Q9UHA2 77 aa11.92□□□□□ -0.5
ATG4B-217ENST00000475693 C9orf116Q5BN46 136 aaPredicted RBP11.91□□□□□ -0.5
ATG4B-217ENST00000475693 DAND5Q8N907 189 aa11.91□□□□□ -0.5
ATG4B-217ENST00000475693 IMUPQ9GZP8 106 aa11.91□□□□□ -0.5
ATG4B-217ENST00000475693 DNAH6Q9C0G6 4158 aa11.91□□□□□ -0.5
ATG4B-217ENST00000475693 USP17L23D6RBM5 183 aa11.91□□□□□ -0.5
ATG4B-217ENST00000475693 UNQ6190/PRO20217Q6UXQ8 127 aa11.91□□□□□ -0.5
ATG4B-217ENST00000475693 Q6ZR54 194 aa11.91□□□□□ -0.5
ATG4B-217ENST00000475693 PSCAO43653 123 aa11.9□□□□□ -0.5
ATG4B-217ENST00000475693 Q8IZM0 81 aa11.9□□□□□ -0.51
ATG4B-217ENST00000475693 Q6ZRN7 208 aaPredicted RBP11.89□□□□□ -0.51
ATG4B-217ENST00000475693 LINC01561Q8N1V8 128 aa11.88□□□□□ -0.51
ATG4B-217ENST00000475693 RMI2Q96E14 147 aa11.88□□□□□ -0.51
ATG4B-217ENST00000475693 FRAS1Q86XX4 4008 aa11.88□□□□□ -0.51
ATG4B-217ENST00000475693 B5MCH6 92 aa11.87□□□□□ -0.51
ATG4B-217ENST00000475693 SOSTDC1Q6X4U4 206 aa11.87□□□□□ -0.51
ATG4B-217ENST00000475693 ZNF561-AS1K7EIQ3 104 aa11.87□□□□□ -0.51
ATG4B-217ENST00000475693 SLPIP03973 132 aa11.87□□□□□ -0.51
ATG4B-217ENST00000475693 PFN2P35080 140 aa11.86□□□□□ -0.51
ATG4B-217ENST00000475693 DNAH17Q9UFH2 4485 aa11.86□□□□□ -0.51
ATG4B-217ENST00000475693 FUSP35637 526 aaKnown RBP eCLIP11.85□□□□□ -0.51
ATG4B-217ENST00000475693 MEIG1Q5JSS6 88 aa11.85□□□□□ -0.51
ATG4B-217ENST00000475693 SDIM1Q6ZPB5 146 aa11.85□□□□□ -0.51
ATG4B-217ENST00000475693 TRAV13-2A0A0B4J235 113 aa11.84□□□□□ -0.51
ATG4B-217ENST00000475693 Q6ZRU5 148 aa11.84□□□□□ -0.51
ATG4B-217ENST00000475693 CCDC179H3BU77 68 aa11.83□□□□□ -0.52
ATG4B-217ENST00000475693 LINC00643Q86TS7 51 aa11.83□□□□□ -0.52
ATG4B-217ENST00000475693 CAMK2N2Q96S95 79 aa11.83□□□□□ -0.52
ATG4B-217ENST00000475693 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.82□□□□□ -0.52
ATG4B-217ENST00000475693 GVQW2A0A096LPI5 108 aaPredicted RBP11.82□□□□□ -0.52
ATG4B-217ENST00000475693 RPL28P46779 137 aaKnown RBP11.82□□□□□ -0.52
ATG4B-217ENST00000475693 C6orf48Q9UBA6 75 aa11.82□□□□□ -0.52
ATG4B-217ENST00000475693 HECTD4Q9Y4D8 3996 aa11.82□□□□□ -0.52
ATG4B-217ENST00000475693 LRCOL1A6NCL2 159 aa11.82□□□□□ -0.52
ATG4B-217ENST00000475693 INAFM2P0DMQ5 153 aa11.81□□□□□ -0.52
ATG4B-217ENST00000475693 RYR2Q92736 4967 aa11.81□□□□□ -0.52
ATG4B-217ENST00000475693 LINC00158P58513 81 aa11.8□□□□□ -0.52
ATG4B-217ENST00000475693 BAALC-AS2P0C853 105 aa11.8□□□□□ -0.52
ATG4B-217ENST00000475693 C1orf134Q5TEV5 83 aa11.8□□□□□ -0.52
ATG4B-217ENST00000475693 FAT2Q9NYQ8 4349 aa11.79□□□□□ -0.52
ATG4B-217ENST00000475693 MIR7-3HGQ8N6C7 128 aa11.78□□□□□ -0.52
ATG4B-217ENST00000475693 C22orf24Q9Y442 160 aa11.78□□□□□ -0.52
ATG4B-217ENST00000475693 SYCNQ0VAF6 134 aa11.77□□□□□ -0.53
ATG4B-217ENST00000475693 DNAH11Q96DT5 4516 aa11.77□□□□□ -0.53
ATG4B-217ENST00000475693 CXCL5P42830 114 aa11.76□□□□□ -0.53
ATG4B-217ENST00000475693 LCE6AA0A183 80 aa11.75□□□□□ -0.53
ATG4B-217ENST00000475693 C2orf48Q96LS8 159 aa11.75□□□□□ -0.53
ATG4B-217ENST00000475693 FAM218AQ96MZ4 157 aa11.75□□□□□ -0.53
ATG4B-217ENST00000475693 RTL8CO15255 209 aa11.74□□□□□ -0.53
ATG4B-217ENST00000475693 TNP2Q05952 138 aa11.74□□□□□ -0.53
ATG4B-217ENST00000475693 SMIM20Q8N5G0 67 aa11.74□□□□□ -0.53
ATG4B-217ENST00000475693 H0YGX0 51 aa11.74□□□□□ -0.53
ATG4B-217ENST00000475693 SMCR5Q8TEV8 140 aa11.74□□□□□ -0.53
ATG4B-217ENST00000475693 A0A087WTM6 91 aa11.73□□□□□ -0.53
ATG4B-217ENST00000475693 TMEM126AQ9H061 195 aa11.73□□□□□ -0.53
ATG4B-217ENST00000475693 RYR3Q15413 4870 aa11.72□□□□□ -0.53
ATG4B-217ENST00000475693 LINC00337Q8N6G1 96 aa11.72□□□□□ -0.53
ATG4B-217ENST00000475693 SND1-IT1Q9HBX3 110 aa11.72□□□□□ -0.53
ATG4B-217ENST00000475693 XAGE1AQ9HD64 81 aa11.72□□□□□ -0.53
ATG4B-217ENST00000475693 IGKV2-28A0A075B6P5 120 aa11.72□□□□□ -0.53
ATG4B-217ENST00000475693 IGKV2D-28P01615 120 aa11.72□□□□□ -0.53
ATG4B-217ENST00000475693 FAM236AA0A1B0GUQ0 79 aa11.71□□□□□ -0.53
ATG4B-217ENST00000475693 FAM236BA0A1B0GV22 79 aa11.71□□□□□ -0.53
ATG4B-217ENST00000475693 Q6ZRP5 223 aa11.7□□□□□ -0.54
ATG4B-217ENST00000475693 Q8N814 137 aa11.7□□□□□ -0.54
ATG4B-217ENST00000475693 Q8NDZ9 215 aa11.7□□□□□ -0.54
ATG4B-217ENST00000475693 DNAH5Q8TE73 4624 aa11.69□□□□□ -0.54
ATG4B-217ENST00000475693 PKD1P98161 4303 aa11.68□□□□□ -0.54
ATG4B-217ENST00000475693 DNAL4O96015 105 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms