RNA–Protein interactions for RNA: ENST00000475491.1

KCNIP3-206, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best)

Gene KCNIP3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-206ENST00000475491 CDC42SE2Q9NRR3 84 aa7.93□□□□□ -1.14
KCNIP3-206ENST00000475491 TRBV6-8A0A0A6YYG3 113 aa7.92□□□□□ -1.14
KCNIP3-206ENST00000475491 K7EIL1 84 aa7.92□□□□□ -1.14
KCNIP3-206ENST00000475491 LINC00269Q8N2A0 174 aa7.92□□□□□ -1.14
KCNIP3-206ENST00000475491 MPLKIPQ8TAP9 179 aa7.92□□□□□ -1.14
KCNIP3-206ENST00000475491 TRBV6-4A0A1B0GX49 114 aa7.91□□□□□ -1.14
KCNIP3-206ENST00000475491 TRBV10-1A0A0K0K1A3 114 aa7.91□□□□□ -1.14
KCNIP3-206ENST00000475491 KLK12Q9UKR0 248 aa7.91□□□□□ -1.14
KCNIP3-206ENST00000475491 C2orf48Q96LS8 159 aa7.91□□□□□ -1.14
KCNIP3-206ENST00000475491 LINC00158P58513 81 aa7.9□□□□□ -1.14
KCNIP3-206ENST00000475491 COPS9Q8WXC6 57 aa7.9□□□□□ -1.14
KCNIP3-206ENST00000475491 Q9HAA7 133 aa7.9□□□□□ -1.14
KCNIP3-206ENST00000475491 SMIM1B2RUZ4 78 aa7.89□□□□□ -1.15
KCNIP3-206ENST00000475491 MIFP14174 115 aa7.89□□□□□ -1.15
KCNIP3-206ENST00000475491 C11orf45Q8TAV5 145 aa7.89□□□□□ -1.15
KCNIP3-206ENST00000475491 C14orf132Q9NPU4 83 aa7.89□□□□□ -1.15
KCNIP3-206ENST00000475491 KPRPQ5T749 579 aaPredicted RBP7.88□□□□□ -1.15
KCNIP3-206ENST00000475491 LYSTQ99698 3801 aa7.88□□□□□ -1.15
KCNIP3-206ENST00000475491 ZNF561-AS1K7EIQ3 104 aa7.88□□□□□ -1.15
KCNIP3-206ENST00000475491 MEGF8Q7Z7M0 2845 aa7.88□□□□□ -1.15
KCNIP3-206ENST00000475491 DEFB131BA0A096LNP1 70 aa7.88□□□□□ -1.15
KCNIP3-206ENST00000475491 SMIM26A0A096LP01 95 aa7.88□□□□□ -1.15
KCNIP3-206ENST00000475491 C6orf226Q5I0X4 101 aa7.88□□□□□ -1.15
KCNIP3-206ENST00000475491 LINC01561Q8N1V8 128 aa7.88□□□□□ -1.15
KCNIP3-206ENST00000475491 WFDC10BQ8IUB3 73 aa7.87□□□□□ -1.15
KCNIP3-206ENST00000475491 SERP1Q9Y6X1 66 aa7.87□□□□□ -1.15
KCNIP3-206ENST00000475491 LYRM9A8MSI8 78 aa7.87□□□□□ -1.15
KCNIP3-206ENST00000475491 TIMM17BO60830 172 aa7.86□□□□□ -1.15
KCNIP3-206ENST00000475491 C9orf116Q5BN46 136 aaPredicted RBP7.85□□□□□ -1.15
KCNIP3-206ENST00000475491 MIR7-3HGQ8N6C7 128 aa7.85□□□□□ -1.15
KCNIP3-206ENST00000475491 LITAFQ99732 161 aa7.85□□□□□ -1.15
KCNIP3-206ENST00000475491 NDUFC2-KCTD14E9PQ53 114 aa7.85□□□□□ -1.15
KCNIP3-206ENST00000475491 SNURFQ9Y675 71 aa7.85□□□□□ -1.15
KCNIP3-206ENST00000475491 COX7A2LO14548 114 aa7.84□□□□□ -1.15
KCNIP3-206ENST00000475491 LECT2O14960 151 aa7.84□□□□□ -1.15
KCNIP3-206ENST00000475491 PRR3P79522 188 aaKnown RBP7.84□□□□□ -1.15
KCNIP3-206ENST00000475491 MIAQ16674 131 aa7.84□□□□□ -1.15
KCNIP3-206ENST00000475491 SOSTDC1Q6X4U4 206 aa7.84□□□□□ -1.15
KCNIP3-206ENST00000475491 EGFEM1PQ0D2K5 195 aa7.83□□□□□ -1.16
KCNIP3-206ENST00000475491 COX7B2Q8TF08 81 aa7.83□□□□□ -1.16
KCNIP3-206ENST00000475491 LINC00959A0A1B0GUT2 108 aa7.82□□□□□ -1.16
KCNIP3-206ENST00000475491 LINC00308Q8TCZ7 52 aa7.82□□□□□ -1.16
KCNIP3-206ENST00000475491 HIGD2BQ4VC39 106 aa7.81□□□□□ -1.16
KCNIP3-206ENST00000475491 SS18Q15532 418 aa7.81□□□□□ -1.16
KCNIP3-206ENST00000475491 ESRGQ1W209 222 aa7.81□□□□□ -1.16
KCNIP3-206ENST00000475491 C6orf223Q8N319 242 aa7.81□□□□□ -1.16
KCNIP3-206ENST00000475491 NDUFA1O15239 70 aa7.81□□□□□ -1.16
KCNIP3-206ENST00000475491 REG3AQ06141 175 aa7.81□□□□□ -1.16
KCNIP3-206ENST00000475491 LYPD5Q6UWN5 251 aa7.8□□□□□ -1.16
KCNIP3-206ENST00000475491 ENHOQ6UWT2 76 aa7.8□□□□□ -1.16
KCNIP3-206ENST00000475491 LINC00474Q9P2X8 69 aa7.8□□□□□ -1.16
KCNIP3-206ENST00000475491 HUWE1Q7Z6Z7 4374 aaKnown RBP7.8□□□□□ -1.16
KCNIP3-206ENST00000475491 Q6JHZ5 121 aa7.8□□□□□ -1.16
KCNIP3-206ENST00000475491 LINC00846Q9NV44 126 aa7.8□□□□□ -1.16
KCNIP3-206ENST00000475491 PMAIP1Q13794 54 aa7.79□□□□□ -1.16
KCNIP3-206ENST00000475491 LINC00612Q8N6U2 182 aa7.79□□□□□ -1.16
KCNIP3-206ENST00000475491 F8WEM9 126 aa7.79□□□□□ -1.16
KCNIP3-206ENST00000475491 CHCHD10Q8WYQ3 142 aaPredicted RBP7.79□□□□□ -1.16
KCNIP3-206ENST00000475491 IGHV3OR16-9A0A0B4J2B5 98 aa7.79□□□□□ -1.16
KCNIP3-206ENST00000475491 FBN3Q75N90 2809 aa7.78□□□□□ -1.16
KCNIP3-206ENST00000475491 CRPP02741 224 aa7.78□□□□□ -1.16
KCNIP3-206ENST00000475491 SND1-IT1Q9HBX3 110 aa7.78□□□□□ -1.16
KCNIP3-206ENST00000475491 PRKDCP78527 4128 aaKnown RBP7.78□□□□□ -1.16
KCNIP3-206ENST00000475491 IGKV2D-24A0A075B6R9 120 aa7.77□□□□□ -1.16
KCNIP3-206ENST00000475491 IGLV5-39A0A0G2JS06 123 aa7.77□□□□□ -1.16
KCNIP3-206ENST00000475491 NCR3O14931 201 aa7.77□□□□□ -1.17
KCNIP3-206ENST00000475491 HAMPP81172 84 aa7.77□□□□□ -1.17
KCNIP3-206ENST00000475491 UPK3BQ9BT76 320 aa7.77□□□□□ -1.17
KCNIP3-206ENST00000475491 UBL5Q9BZL1 73 aa7.76□□□□□ -1.17
KCNIP3-206ENST00000475491 IGLV5-45A0A087WSX0 123 aa7.76□□□□□ -1.17
KCNIP3-206ENST00000475491 MRPL55Q7Z7F7 128 aaKnown RBP7.76□□□□□ -1.17
KCNIP3-206ENST00000475491 FAM19A1Q7Z5A9 133 aa7.76□□□□□ -1.17
KCNIP3-206ENST00000475491 TRBV7-6A0A0J9YX20 115 aa7.75□□□□□ -1.17
KCNIP3-206ENST00000475491 RMI2Q96E14 147 aa7.75□□□□□ -1.17
KCNIP3-206ENST00000475491 LINC01600Q96MT4 127 aa7.74□□□□□ -1.17
KCNIP3-206ENST00000475491 M0R2N4 97 aa7.74□□□□□ -1.17
KCNIP3-206ENST00000475491 CCL18P55774 89 aa7.74□□□□□ -1.17
KCNIP3-206ENST00000475491 XAGE1AQ9HD64 81 aa7.74□□□□□ -1.17
KCNIP3-206ENST00000475491 LINC00337Q8N6G1 96 aa7.73□□□□□ -1.17
KCNIP3-206ENST00000475491 A0A087WZ39 114 aa7.73□□□□□ -1.17
KCNIP3-206ENST00000475491 H3BS24 57 aa7.73□□□□□ -1.17
KCNIP3-206ENST00000475491 SLPIP03973 132 aa7.73□□□□□ -1.17
KCNIP3-206ENST00000475491 RPL28P46779 137 aaKnown RBP7.73□□□□□ -1.17
KCNIP3-206ENST00000475491 C10orf25Q5T742 122 aa7.73□□□□□ -1.17
KCNIP3-206ENST00000475491 UNQ6190/PRO20217Q6UXQ8 127 aa7.73□□□□□ -1.17
KCNIP3-206ENST00000475491 FUSP35637 526 aaKnown RBP eCLIP7.72□□□□□ -1.17
KCNIP3-206ENST00000475491 LELP1Q5T871 98 aa7.72□□□□□ -1.17
KCNIP3-206ENST00000475491 CCKP06307 115 aa7.71□□□□□ -1.17
KCNIP3-206ENST00000475491 CASC10Q5T4H9 136 aa7.71□□□□□ -1.17
KCNIP3-206ENST00000475491 UBE2DNLQ8IWF7 75 aa7.7□□□□□ -1.18
KCNIP3-206ENST00000475491 FAM218AQ96MZ4 157 aa7.7□□□□□ -1.18
KCNIP3-206ENST00000475491 SPAG11BQ08648 103 aa7.7□□□□□ -1.18
KCNIP3-206ENST00000475491 FP248Q71RG6 208 aaPredicted RBP7.7□□□□□ -1.18
KCNIP3-206ENST00000475491 LINC00588Q9Y4M8 146 aa7.69□□□□□ -1.18
KCNIP3-206ENST00000475491 DNAH9Q9NYC9 4486 aa7.69□□□□□ -1.18
KCNIP3-206ENST00000475491 IGKV2-28A0A075B6P5 120 aa7.68□□□□□ -1.18
KCNIP3-206ENST00000475491 LRCOL1A6NCL2 159 aa7.68□□□□□ -1.18
KCNIP3-206ENST00000475491 IGKV2D-28P01615 120 aa7.68□□□□□ -1.18
KCNIP3-206ENST00000475491 TM2D3Q9BRN9 247 aa7.68□□□□□ -1.18
KCNIP3-206ENST00000475491 DNAH3Q8TD57 4116 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 209.3 ms