RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 A0A0G2JND7 137 aa-0.59□□□□□ -2.5
LTN1-204ENST00000475344 C20orf202A1L168 122 aa-0.59□□□□□ -2.5
LTN1-204ENST00000475344 LYSTQ99698 3801 aa-0.59□□□□□ -2.5
LTN1-204ENST00000475344 C6orf201Q7Z4U5 140 aa-0.6□□□□□ -2.51
LTN1-204ENST00000475344 DEFB107AQ8IZN7 70 aa-0.6□□□□□ -2.51
LTN1-204ENST00000475344 CACFD1Q9UGQ2 172 aa-0.6□□□□□ -2.51
LTN1-204ENST00000475344 AKAP13Q12802 2813 aa-0.6□□□□□ -2.51
LTN1-204ENST00000475344 PKD1P98161 4303 aa-0.6□□□□□ -2.51
LTN1-204ENST00000475344 DNHD1Q96M86 4753 aa-0.61□□□□□ -2.51
LTN1-204ENST00000475344 VAMP8Q9BV40 100 aa-0.61□□□□□ -2.51
LTN1-204ENST00000475344 FAM135AQ9P2D6 1515 aa-0.61□□□□□ -2.51
LTN1-204ENST00000475344 TARBP1Q13395 1621 aaKnown RBP-0.61□□□□□ -2.51
LTN1-204ENST00000475344 DSPP15924 2871 aaKnown RBP-0.62□□□□□ -2.51
LTN1-204ENST00000475344 ZFYVE16Q7Z3T8 1539 aa-0.62□□□□□ -2.51
LTN1-204ENST00000475344 GNGT2O14610 69 aa-0.62□□□□□ -2.51
LTN1-204ENST00000475344 H1FX-AS1Q4G0G2 97 aa-0.62□□□□□ -2.51
LTN1-204ENST00000475344 NKTRP30414 1462 aaKnown RBP-0.62□□□□□ -2.51
LTN1-204ENST00000475344 SHPRHQ149N8 1683 aa-0.62□□□□□ -2.51
LTN1-204ENST00000475344 AKAP9Q99996 3911 aa-0.63□□□□□ -2.51
LTN1-204ENST00000475344 SLIT1O75093 1534 aa-0.63□□□□□ -2.51
LTN1-204ENST00000475344 MON2Q7Z3U7 1717 aa-0.63□□□□□ -2.51
LTN1-204ENST00000475344 TRBV25-1A0A075B6N4 114 aa-0.63□□□□□ -2.51
LTN1-204ENST00000475344 H3BQF6 201 aa-0.63□□□□□ -2.51
LTN1-204ENST00000475344 ZZEF1O43149 2961 aa-0.63□□□□□ -2.51
LTN1-204ENST00000475344 COL14A1Q05707 1796 aaKnown RBP-0.63□□□□□ -2.51
LTN1-204ENST00000475344 HTTP42858 3142 aa-0.63□□□□□ -2.51
LTN1-204ENST00000475344 COL12A1Q99715 3063 aa-0.63□□□□□ -2.51
LTN1-204ENST00000475344 KIF20BQ96Q89 1820 aa-0.64□□□□□ -2.51
LTN1-204ENST00000475344 DNAH6Q9C0G6 4158 aa-0.64□□□□□ -2.51
LTN1-204ENST00000475344 MLH3Q9UHC1 1453 aa-0.64□□□□□ -2.51
LTN1-204ENST00000475344 H0Y9P7 68 aa-0.64□□□□□ -2.51
LTN1-204ENST00000475344 PSMG4Q5JS54 123 aa-0.64□□□□□ -2.51
LTN1-204ENST00000475344 TNRC18O15417 2968 aaPredicted RBP-0.64□□□□□ -2.51
LTN1-204ENST00000475344 KIAA1551Q9HCM1 1747 aa-0.64□□□□□ -2.51
LTN1-204ENST00000475344 MYH4Q9Y623 1939 aa-0.65□□□□□ -2.51
LTN1-204ENST00000475344 H7BZZ5 65 aa-0.65□□□□□ -2.51
LTN1-204ENST00000475344 I3L3M4 83 aa-0.65□□□□□ -2.51
LTN1-204ENST00000475344 NDUFC1O43677 76 aa-0.65□□□□□ -2.51
LTN1-204ENST00000475344 MT-ATP8P03928 68 aa-0.65□□□□□ -2.51
LTN1-204ENST00000475344 GNGT1P63211 74 aa-0.65□□□□□ -2.51
LTN1-204ENST00000475344 PMCHL1Q16048 86 aa-0.65□□□□□ -2.51
LTN1-204ENST00000475344 TRGV9Q99603 122 aa-0.65□□□□□ -2.51
LTN1-204ENST00000475344 SPG11Q96JI7 2443 aa-0.65□□□□□ -2.51
LTN1-204ENST00000475344 PDE4DIPQ5VU43 2346 aa-0.65□□□□□ -2.51
LTN1-204ENST00000475344 EDC4Q6P2E9 1401 aaKnown RBP-0.65□□□□□ -2.51
LTN1-204ENST00000475344 EPG5Q9HCE0 2579 aa-0.65□□□□□ -2.51
LTN1-204ENST00000475344 CCDC141Q6ZP82 1450 aa-0.66□□□□□ -2.51
LTN1-204ENST00000475344 CELSR3Q9NYQ7 3312 aa-0.66□□□□□ -2.52
LTN1-204ENST00000475344 KRTAP6-2Q3LI66 62 aa-0.66□□□□□ -2.52
LTN1-204ENST00000475344 PRDM15P57071 1507 aaPredicted RBP-0.66□□□□□ -2.52
LTN1-204ENST00000475344 NCOA3Q9Y6Q9 1424 aa-0.66□□□□□ -2.52
LTN1-204ENST00000475344 LRRC37AA6NMS7 1700 aa-0.67□□□□□ -2.52
LTN1-204ENST00000475344 TACC2O95359 2948 aa-0.67□□□□□ -2.52
LTN1-204ENST00000475344 SPTBN4Q9H254 2564 aa-0.67□□□□□ -2.52
LTN1-204ENST00000475344 TMEM218A2RU14 115 aa-0.67□□□□□ -2.52
LTN1-204ENST00000475344 ARMS2P0C7Q2 107 aa-0.67□□□□□ -2.52
LTN1-204ENST00000475344 DEFB135Q30KP9 77 aa-0.67□□□□□ -2.52
LTN1-204ENST00000475344 C14orf144Q96I85 54 aa-0.67□□□□□ -2.52
LTN1-204ENST00000475344 PMCHL2Q9BQD1 86 aa-0.67□□□□□ -2.52
LTN1-204ENST00000475344 NBEAL2Q6ZNJ1 2754 aa-0.68□□□□□ -2.52
LTN1-204ENST00000475344 C5P01031 1676 aa-0.68□□□□□ -2.52
LTN1-204ENST00000475344 S100PP25815 95 aa-0.68□□□□□ -2.52
LTN1-204ENST00000475344 S100A10P60903 97 aa-0.68□□□□□ -2.52
LTN1-204ENST00000475344 HECTD1Q9ULT8 2610 aa-0.68□□□□□ -2.52
LTN1-204ENST00000475344 ANKRD36BQ8N2N9 1353 aa-0.69□□□□□ -2.52
LTN1-204ENST00000475344 DNAH9Q9NYC9 4486 aa-0.69□□□□□ -2.52
LTN1-204ENST00000475344 UQCRHP07919 91 aa-0.69□□□□□ -2.52
LTN1-204ENST00000475344 KRTAP20-1Q3LI63 56 aa-0.69□□□□□ -2.52
LTN1-204ENST00000475344 LELP1Q5T871 98 aa-0.69□□□□□ -2.52
LTN1-204ENST00000475344 NRXN1Q9ULB1 1477 aa-0.69□□□□□ -2.52
LTN1-204ENST00000475344 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.69□□□□□ -2.52
LTN1-204ENST00000475344 WDR87Q6ZQQ6 2873 aa-0.69□□□□□ -2.52
LTN1-204ENST00000475344 COL6A5A8TX70 2615 aa-0.69□□□□□ -2.52
LTN1-204ENST00000475344 MUC17Q685J3 4493 aa-0.7□□□□□ -2.52
LTN1-204ENST00000475344 RGPD2P0DJD1 1756 aa-0.7□□□□□ -2.52
LTN1-204ENST00000475344 TRAV30A0A087WSZ9 112 aa-0.7□□□□□ -2.52
LTN1-204ENST00000475344 ATP6V1G2-DDX39BF2Z307 99 aa-0.7□□□□□ -2.52
LTN1-204ENST00000475344 MRPL34Q9BQ48 92 aaKnown RBP-0.7□□□□□ -2.52
LTN1-204ENST00000475344 AP4S1Q9Y587 144 aa-0.7□□□□□ -2.52
LTN1-204ENST00000475344 MPC2O95563 127 aa-0.71□□□□□ -2.52
LTN1-204ENST00000475344 SPRR2AP35326 72 aa-0.71□□□□□ -2.52
LTN1-204ENST00000475344 SERP2Q8N6R1 65 aa-0.71□□□□□ -2.52
LTN1-204ENST00000475344 ITPR3Q14573 2671 aa-0.71□□□□□ -2.52
LTN1-204ENST00000475344 CUX1P39880 1505 aa-0.71□□□□□ -2.52
LTN1-204ENST00000475344 USP9XQ93008 2570 aaPredicted RBP-0.71□□□□□ -2.52
LTN1-204ENST00000475344 CRYBG1Q9Y4K1 1723 aa-0.72□□□□□ -2.52
LTN1-204ENST00000475344 BCORQ6W2J9 1755 aa-0.72□□□□□ -2.52
LTN1-204ENST00000475344 ATOX1O00244 68 aa-0.72□□□□□ -2.52
LTN1-204ENST00000475344 SPRR2EP22531 72 aa-0.72□□□□□ -2.52
LTN1-204ENST00000475344 C9orf62Q8N4C0 152 aa-0.72□□□□□ -2.52
LTN1-204ENST00000475344 DNAH2Q9P225 4427 aa-0.72□□□□□ -2.53
LTN1-204ENST00000475344 VPS13DQ5THJ4 4388 aa-0.73□□□□□ -2.53
LTN1-204ENST00000475344 RAPGEF2Q9Y4G8 1499 aa-0.73□□□□□ -2.53
LTN1-204ENST00000475344 UBR3Q6ZT12 1888 aa-0.73□□□□□ -2.53
LTN1-204ENST00000475344 DMXL1Q9Y485 3027 aa-0.73□□□□□ -2.53
LTN1-204ENST00000475344 TRBV7-7A0A0K0K1E9 115 aa-0.73□□□□□ -2.53
LTN1-204ENST00000475344 PSENENQ9NZ42 101 aa-0.73□□□□□ -2.53
LTN1-204ENST00000475344 USP9YO00507 2555 aaPredicted RBP-0.73□□□□□ -2.53
LTN1-204ENST00000475344 SAMD9Q5K651 1589 aa-0.74□□□□□ -2.53
LTN1-204ENST00000475344 DNAH3Q8TD57 4116 aa-0.74□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 352.6 ms