RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 RPL37AP8A6NKH3 93 aa5.69□□□□□ -1.5
PDPN-204ENST00000475043 TMEM170BQ5T4T1 132 aa5.69□□□□□ -1.5
PDPN-204ENST00000475043 NKAPP1Q8N9T2 125 aa5.69□□□□□ -1.5
PDPN-204ENST00000475043 TP73-AS1Q9UF72 201 aa5.69□□□□□ -1.5
PDPN-204ENST00000475043 IGLV5-39A0A0G2JS06 123 aa5.68□□□□□ -1.5
PDPN-204ENST00000475043 C11orf86A6NJI1 115 aa5.68□□□□□ -1.5
PDPN-204ENST00000475043 ZNF861PO60384 105 aa5.68□□□□□ -1.5
PDPN-204ENST00000475043 ZNF625Q96I27 306 aaPredicted RBP5.68□□□□□ -1.5
PDPN-204ENST00000475043 LINC00167Q96N53 147 aa5.68□□□□□ -1.5
PDPN-204ENST00000475043 TNXBP22105 4242 aa5.67□□□□□ -1.5
PDPN-204ENST00000475043 IGLV1-50A0A075B6I6 118 aa5.67□□□□□ -1.5
PDPN-204ENST00000475043 CBLN2Q8IUK8 224 aa5.67□□□□□ -1.5
PDPN-204ENST00000475043 CHCHD1Q96BP2 118 aaKnown RBP5.67□□□□□ -1.5
PDPN-204ENST00000475043 YPEL4Q96NS1 127 aa5.67□□□□□ -1.5
PDPN-204ENST00000475043 ERG28Q9UKR5 140 aa5.67□□□□□ -1.5
PDPN-204ENST00000475043 CHTOPQ9Y3Y2 248 aaKnown RBP5.67□□□□□ -1.5
PDPN-204ENST00000475043 BCE1O60756 84 aa5.66□□□□□ -1.5
PDPN-204ENST00000475043 KRTAP1-4P0C5Y4 121 aa5.66□□□□□ -1.5
PDPN-204ENST00000475043 RPL28P46779 137 aaKnown RBP5.66□□□□□ -1.5
PDPN-204ENST00000475043 IFI27L1Q96BM0 104 aa5.66□□□□□ -1.5
PDPN-204ENST00000475043 IGLV5-37A0A075B6J1 123 aa5.65□□□□□ -1.5
PDPN-204ENST00000475043 IGKV2-28A0A075B6P5 120 aa5.65□□□□□ -1.5
PDPN-204ENST00000475043 HSBP1O75506 76 aa5.65□□□□□ -1.5
PDPN-204ENST00000475043 SCO1O75880 301 aa5.65□□□□□ -1.5
PDPN-204ENST00000475043 IGKV2D-28P01615 120 aa5.65□□□□□ -1.5
PDPN-204ENST00000475043 COX17Q14061 63 aa5.65□□□□□ -1.5
PDPN-204ENST00000475043 SND1-IT1Q9HBX3 110 aa5.65□□□□□ -1.5
PDPN-204ENST00000475043 H0Y8G0 127 aa5.64□□□□□ -1.51
PDPN-204ENST00000475043 RPL13AP40429 203 aaKnown RBP5.64□□□□□ -1.51
PDPN-204ENST00000475043 UBE2AP49459 152 aa5.64□□□□□ -1.51
PDPN-204ENST00000475043 SFTA2Q6UW10 78 aa5.64□□□□□ -1.51
PDPN-204ENST00000475043 FAM19A2Q8N3H0 131 aa5.64□□□□□ -1.51
PDPN-204ENST00000475043 CDIP1Q9H305 208 aa5.64□□□□□ -1.51
PDPN-204ENST00000475043 UBR4Q5T4S7 5183 aa5.64□□□□□ -1.51
PDPN-204ENST00000475043 TRAV12-1A0A0B4J245 112 aa5.63□□□□□ -1.51
PDPN-204ENST00000475043 A0A0U1RRA0 63 aa5.63□□□□□ -1.51
PDPN-204ENST00000475043 TRGC2P03986 189 aa5.63□□□□□ -1.51
PDPN-204ENST00000475043 LINC00158P58513 81 aa5.63□□□□□ -1.51
PDPN-204ENST00000475043 RPL24P83731 157 aaKnown RBP5.63□□□□□ -1.51
PDPN-204ENST00000475043 TMEM223A0PJW6 202 aa5.62□□□□□ -1.51
PDPN-204ENST00000475043 VPREB1P12018 145 aa5.62□□□□□ -1.51
PDPN-204ENST00000475043 KRTAP5-3Q6L8H2 238 aa5.62□□□□□ -1.51
PDPN-204ENST00000475043 SLC7A5P1Q8MH63 180 aa5.62□□□□□ -1.51
PDPN-204ENST00000475043 ATP6V1G1O75348 118 aa5.61□□□□□ -1.51
PDPN-204ENST00000475043 CTAG1AP78358 180 aa5.61□□□□□ -1.51
PDPN-204ENST00000475043 TMEM238C9JI98 176 aa5.6□□□□□ -1.51
PDPN-204ENST00000475043 SERF1AO75920 110 aa5.6□□□□□ -1.51
PDPN-204ENST00000475043 LEPROTL1O95214 131 aa5.6□□□□□ -1.51
PDPN-204ENST00000475043 MEIG1Q5JSS6 88 aa5.6□□□□□ -1.51
PDPN-204ENST00000475043 FAM19A1Q7Z5A9 133 aa5.6□□□□□ -1.51
PDPN-204ENST00000475043 TMEM126AQ9H061 195 aa5.6□□□□□ -1.51
PDPN-204ENST00000475043 A0A087X002 238 aa5.59□□□□□ -1.51
PDPN-204ENST00000475043 CRYGAP11844 174 aa5.59□□□□□ -1.51
PDPN-204ENST00000475043 FABP4P15090 132 aa5.59□□□□□ -1.51
PDPN-204ENST00000475043 PRLHP81277 87 aa5.59□□□□□ -1.51
PDPN-204ENST00000475043 Q8NDZ9 215 aa5.59□□□□□ -1.51
PDPN-204ENST00000475043 ANAPC11Q9NYG5 84 aa5.59□□□□□ -1.51
PDPN-204ENST00000475043 TSPAN13O95857 204 aa5.58□□□□□ -1.52
PDPN-204ENST00000475043 SMIM13P0DJ93 91 aa5.58□□□□□ -1.52
PDPN-204ENST00000475043 HERV-K104P63124 156 aa5.58□□□□□ -1.52
PDPN-204ENST00000475043 KRTAP13-1Q8IUC0 172 aa5.58□□□□□ -1.52
PDPN-204ENST00000475043 TYMSOSQ8TAI1 123 aa5.58□□□□□ -1.52
PDPN-204ENST00000475043 M0R378 163 aa5.57□□□□□ -1.52
PDPN-204ENST00000475043 PRR4Q16378 134 aa5.57□□□□□ -1.52
PDPN-204ENST00000475043 BOD1L2Q8IYS8 172 aa5.57□□□□□ -1.52
PDPN-204ENST00000475043 MIR7-3HGQ8N6C7 128 aa5.57□□□□□ -1.52
PDPN-204ENST00000475043 NDUFA12Q9UI09 145 aa5.57□□□□□ -1.52
PDPN-204ENST00000475043 HSPB8Q9UJY1 196 aa5.57□□□□□ -1.52
PDPN-204ENST00000475043 MYMXA0A1B0GTQ4 84 aa5.56□□□□□ -1.52
PDPN-204ENST00000475043 COLCA2A8K830 154 aa5.56□□□□□ -1.52
PDPN-204ENST00000475043 LINC00587B1AMM8 73 aa5.56□□□□□ -1.52
PDPN-204ENST00000475043 PLNP26678 52 aa5.56□□□□□ -1.52
PDPN-204ENST00000475043 NCR3O14931 201 aa5.55□□□□□ -1.52
PDPN-204ENST00000475043 DPM2O94777 84 aa5.55□□□□□ -1.52
PDPN-204ENST00000475043 PMCHL2Q9BQD1 86 aa5.55□□□□□ -1.52
PDPN-204ENST00000475043 HIGD2AQ9BW72 106 aa5.55□□□□□ -1.52
PDPN-204ENST00000475043 MAP1LC3CQ9BXW4 147 aa5.55□□□□□ -1.52
PDPN-204ENST00000475043 LRP2P98164 4655 aa5.55□□□□□ -1.52
PDPN-204ENST00000475043 IGKV2D-26A0A0A0MRZ7 120 aa5.54□□□□□ -1.52
PDPN-204ENST00000475043 LEPROTO15243 131 aa5.54□□□□□ -1.52
PDPN-204ENST00000475043 IGKCP01834 107 aa5.54□□□□□ -1.52
PDPN-204ENST00000475043 TSPEAR-AS2P59090 65 aa5.54□□□□□ -1.52
PDPN-204ENST00000475043 HERVK_113P61574 105 aa5.54□□□□□ -1.52
PDPN-204ENST00000475043 FAM229BQ4G0N7 80 aa5.54□□□□□ -1.52
PDPN-204ENST00000475043 KRTAP13-2Q52LG2 175 aa5.54□□□□□ -1.52
PDPN-204ENST00000475043 PLEKHB2Q96CS7 222 aa5.54□□□□□ -1.52
PDPN-204ENST00000475043 J3QQQ9 107 aa5.53□□□□□ -1.52
PDPN-204ENST00000475043 LGALS3P17931 250 aaKnown RBP5.53□□□□□ -1.52
PDPN-204ENST00000475043 DAND5Q8N907 189 aa5.53□□□□□ -1.52
PDPN-204ENST00000475043 PRYO14603 147 aa5.52□□□□□ -1.53
PDPN-204ENST00000475043 LPAP08519 4548 aa5.51□□□□□ -1.53
PDPN-204ENST00000475043 SCGB1D1O95968 90 aa5.51□□□□□ -1.53
PDPN-204ENST00000475043 NMUP48645 174 aa5.51□□□□□ -1.53
PDPN-204ENST00000475043 S100A12P80511 92 aa5.51□□□□□ -1.53
PDPN-204ENST00000475043 LINC00304Q8N9R0 145 aa5.51□□□□□ -1.53
PDPN-204ENST00000475043 MIEN1Q9BRT3 115 aa5.51□□□□□ -1.53
PDPN-204ENST00000475043 TRBV10-3A0A0K0K1G6 114 aa5.5□□□□□ -1.53
PDPN-204ENST00000475043 ETDCA0A1B0GVM5 59 aa5.5□□□□□ -1.53
PDPN-204ENST00000475043 KCNQ1DNQ9H478 68 aa5.5□□□□□ -1.53
PDPN-204ENST00000475043 HIST1H2BKO60814 126 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms