RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 ZNF702PQ9H963 129 aa2.69□□□□□ -1.98
USP16-205ENST00000474835 TRAV23DV6A0A075B6W5 121 aa2.68□□□□□ -1.98
USP16-205ENST00000474835 CCL24O00175 119 aa2.68□□□□□ -1.98
USP16-205ENST00000474835 GRNP28799 593 aaKnown RBP2.68□□□□□ -1.98
USP16-205ENST00000474835 ECSCRQ19T08 205 aa2.68□□□□□ -1.98
USP16-205ENST00000474835 Q1RN00 199 aa2.68□□□□□ -1.98
USP16-205ENST00000474835 SRRM2Q9UQ35 2752 aaKnown RBP2.68□□□□□ -1.98
USP16-205ENST00000474835 ACACAQ13085 2346 aa2.68□□□□□ -1.98
USP16-205ENST00000474835 GCN1Q92616 2671 aaKnown RBP2.68□□□□□ -1.98
USP16-205ENST00000474835 LINC00959A0A1B0GUT2 108 aa2.68□□□□□ -1.98
USP16-205ENST00000474835 PRYO14603 147 aa2.68□□□□□ -1.98
USP16-205ENST00000474835 DNAL4O96015 105 aa2.68□□□□□ -1.98
USP16-205ENST00000474835 DSCR9P59020 149 aa2.68□□□□□ -1.98
USP16-205ENST00000474835 NREPQ16612 68 aa2.68□□□□□ -1.98
USP16-205ENST00000474835 Q8N3U1 123 aa2.68□□□□□ -1.98
USP16-205ENST00000474835 COL7A1Q02388 2944 aa2.68□□□□□ -1.98
USP16-205ENST00000474835 PTPN13Q12923 2485 aa2.68□□□□□ -1.98
USP16-205ENST00000474835 IGLV5-37A0A075B6J1 123 aa2.68□□□□□ -1.98
USP16-205ENST00000474835 Q75L30 129 aa2.68□□□□□ -1.98
USP16-205ENST00000474835 MAP6D1Q9H9H5 199 aa2.68□□□□□ -1.98
USP16-205ENST00000474835 A8MU10 97 aa2.67□□□□□ -1.98
USP16-205ENST00000474835 CRPP02741 224 aa2.67□□□□□ -1.98
USP16-205ENST00000474835 S100A4P26447 101 aaKnown RBP2.67□□□□□ -1.98
USP16-205ENST00000474835 LINC01356Q8N9X3 169 aa2.67□□□□□ -1.98
USP16-205ENST00000474835 KMT2BQ9UMN6 2715 aaPredicted RBP2.67□□□□□ -1.98
USP16-205ENST00000474835 DSCR10P59022 87 aa2.67□□□□□ -1.98
USP16-205ENST00000474835 SYCNQ0VAF6 134 aa2.67□□□□□ -1.98
USP16-205ENST00000474835 ODF3L2Q3SX64 289 aa2.67□□□□□ -1.98
USP16-205ENST00000474835 C1orf64Q8NEQ6 169 aa2.67□□□□□ -1.98
USP16-205ENST00000474835 UBE2E2Q96LR5 201 aa2.67□□□□□ -1.98
USP16-205ENST00000474835 KRTAP17-1Q9BYP8 105 aa2.67□□□□□ -1.98
USP16-205ENST00000474835 PLA2G2DQ9UNK4 145 aa2.67□□□□□ -1.98
USP16-205ENST00000474835 V9GYY9 64 aa2.67□□□□□ -1.98
USP16-205ENST00000474835 POLQO75417 2590 aa2.67□□□□□ -1.98
USP16-205ENST00000474835 TTC28Q96AY4 2481 aa2.67□□□□□ -1.98
USP16-205ENST00000474835 HOXD3P31249 432 aaPredicted RBP2.67□□□□□ -1.98
USP16-205ENST00000474835 SPINK13Q1W4C9 94 aa2.67□□□□□ -1.98
USP16-205ENST00000474835 KRTAP13-3Q3SY46 172 aa2.67□□□□□ -1.98
USP16-205ENST00000474835 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.67□□□□□ -1.98
USP16-205ENST00000474835 LCA10Q71F78 164 aa2.67□□□□□ -1.98
USP16-205ENST00000474835 KRTAP7-1Q8IUC3 87 aa2.67□□□□□ -1.98
USP16-205ENST00000474835 ZFHX2Q9C0A1 2572 aaPredicted RBP2.66□□□□□ -1.98
USP16-205ENST00000474835 SACSQ9NZJ4 4579 aa2.66□□□□□ -1.98
USP16-205ENST00000474835 TRBV6-8A0A0A6YYG3 113 aa2.66□□□□□ -1.98
USP16-205ENST00000474835 ARRDC1-AS1Q9H2J1 176 aa2.66□□□□□ -1.98
USP16-205ENST00000474835 EPG5Q9HCE0 2579 aa2.66□□□□□ -1.98
USP16-205ENST00000474835 SPG11Q96JI7 2443 aa2.66□□□□□ -1.98
USP16-205ENST00000474835 PKD1P98161 4303 aa2.66□□□□□ -1.98
USP16-205ENST00000474835 FBN3Q75N90 2809 aa2.66□□□□□ -1.98
USP16-205ENST00000474835 TRAV22A0A0B4J277 110 aa2.66□□□□□ -1.98
USP16-205ENST00000474835 PMAIP1Q13794 54 aa2.66□□□□□ -1.98
USP16-205ENST00000474835 Q8N9P0 234 aaPredicted RBP2.66□□□□□ -1.98
USP16-205ENST00000474835 CREBBPQ92793 2442 aa2.66□□□□□ -1.98
USP16-205ENST00000474835 BPY2O14599 106 aa2.65□□□□□ -1.98
USP16-205ENST00000474835 VPREB1P12018 145 aa2.65□□□□□ -1.98
USP16-205ENST00000474835 COX7BP24311 80 aa2.65□□□□□ -1.98
USP16-205ENST00000474835 C16orf90A8MZG2 172 aa2.65□□□□□ -1.99
USP16-205ENST00000474835 RPL36AP83881 106 aaKnown RBP2.65□□□□□ -1.99
USP16-205ENST00000474835 ANKRD17O75179 2603 aaKnown RBP2.65□□□□□ -1.99
USP16-205ENST00000474835 ZFYVE26Q68DK2 2539 aa2.64□□□□□ -1.99
USP16-205ENST00000474835 TNXBP22105 4242 aa2.64□□□□□ -1.99
USP16-205ENST00000474835 C10orf99Q6UWK7 81 aa2.64□□□□□ -1.99
USP16-205ENST00000474835 SMIM29Q86T20 159 aa2.64□□□□□ -1.99
USP16-205ENST00000474835 C4orf3Q8WVX3 66 aa2.64□□□□□ -1.99
USP16-205ENST00000474835 DNAH11Q96DT5 4516 aa2.64□□□□□ -1.99
USP16-205ENST00000474835 CHD8Q9HCK8 2581 aa2.64□□□□□ -1.99
USP16-205ENST00000474835 CSPG4Q6UVK1 2322 aa2.64□□□□□ -1.99
USP16-205ENST00000474835 ANKHD1Q8IWZ3 2542 aaKnown RBP2.64□□□□□ -1.99
USP16-205ENST00000474835 RBM3P98179 157 aaKnown RBP2.64□□□□□ -1.99
USP16-205ENST00000474835 KTN1-AS1Q86SY8 53 aa2.64□□□□□ -1.99
USP16-205ENST00000474835 VPS13BQ7Z7G8 4022 aa2.64□□□□□ -1.99
USP16-205ENST00000474835 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.63□□□□□ -1.99
USP16-205ENST00000474835 A0A1W2PNM2 257 aa2.63□□□□□ -1.99
USP16-205ENST00000474835 C10orf25Q5T742 122 aa2.63□□□□□ -1.99
USP16-205ENST00000474835 FAM74A4Q5TZK3 123 aa2.63□□□□□ -1.99
USP16-205ENST00000474835 LINC01006Q8NI28 216 aa2.63□□□□□ -1.99
USP16-205ENST00000474835 UBL5Q9BZL1 73 aa2.63□□□□□ -1.99
USP16-205ENST00000474835 SNURFQ9Y675 71 aa2.63□□□□□ -1.99
USP16-205ENST00000474835 A0A0U1RRA0 63 aa2.63□□□□□ -1.99
USP16-205ENST00000474835 SNRPD3P62318 126 aaKnown RBP2.63□□□□□ -1.99
USP16-205ENST00000474835 IGF2RP11717 2491 aa2.63□□□□□ -1.99
USP16-205ENST00000474835 Q6YL49 198 aa2.63□□□□□ -1.99
USP16-205ENST00000474835 DEFB109BQ30KR1 87 aa2.62□□□□□ -1.99
USP16-205ENST00000474835 KPRPQ5T749 579 aaPredicted RBP2.62□□□□□ -1.99
USP16-205ENST00000474835 Q8N377 158 aa2.62□□□□□ -1.99
USP16-205ENST00000474835 HSPG2P98160 4391 aa2.62□□□□□ -1.99
USP16-205ENST00000474835 TLN2Q9Y4G6 2542 aa2.62□□□□□ -1.99
USP16-205ENST00000474835 TLX1NBP0CAT3 122 aa2.62□□□□□ -1.99
USP16-205ENST00000474835 PRR3P79522 188 aaKnown RBP2.62□□□□□ -1.99
USP16-205ENST00000474835 IGKV3-7A0A075B6H7 116 aa2.62□□□□□ -1.99
USP16-205ENST00000474835 TRGV2A0A075B6R0 118 aa2.62□□□□□ -1.99
USP16-205ENST00000474835 KRTAP1-3Q8IUG1 177 aa2.62□□□□□ -1.99
USP16-205ENST00000474835 WFDC11Q8NEX6 87 aa2.62□□□□□ -1.99
USP16-205ENST00000474835 USP9YO00507 2555 aaPredicted RBP2.62□□□□□ -1.99
USP16-205ENST00000474835 MUC6Q6W4X9 2439 aa2.61□□□□□ -1.99
USP16-205ENST00000474835 MYO9AB2RTY4 2548 aa2.61□□□□□ -1.99
USP16-205ENST00000474835 NCOR2Q9Y618 2525 aa2.61□□□□□ -1.99
USP16-205ENST00000474835 TRGV4A0A0C4DH28 118 aa2.61□□□□□ -1.99
USP16-205ENST00000474835 F5H697 171 aa2.61□□□□□ -1.99
USP16-205ENST00000474835 HIGD2AQ9BW72 106 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms