RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 C2orf82Q6UX34 121 aa8.35□□□□□ -1.07
CCDC78-209ENST00000474647 TRBV30A0A0K0K1B3 111 aa8.34□□□□□ -1.07
CCDC78-209ENST00000474647 C11orf86A6NJI1 115 aa8.34□□□□□ -1.07
CCDC78-209ENST00000474647 NDUFC2-KCTD14E9PQ53 114 aa8.34□□□□□ -1.07
CCDC78-209ENST00000474647 TSTD3H0UI37 97 aa8.34□□□□□ -1.07
CCDC78-209ENST00000474647 C9orf129Q5T035 196 aaKnown RBP8.34□□□□□ -1.07
CCDC78-209ENST00000474647 PET117Q6UWS5 81 aa8.34□□□□□ -1.07
CCDC78-209ENST00000474647 LINC01561Q8N1V8 128 aa8.34□□□□□ -1.07
CCDC78-209ENST00000474647 LINC00469Q8N7U9 141 aa8.34□□□□□ -1.07
CCDC78-209ENST00000474647 CDKN2A-AS1Q9UH64 79 aa8.34□□□□□ -1.07
CCDC78-209ENST00000474647 ZNF22P17026 224 aaPredicted RBP8.33□□□□□ -1.08
CCDC78-209ENST00000474647 KIAA0087Q14695 138 aa8.33□□□□□ -1.08
CCDC78-209ENST00000474647 LINC01545Q5VT33 79 aa8.33□□□□□ -1.08
CCDC78-209ENST00000474647 PLNP26678 52 aa8.32□□□□□ -1.08
CCDC78-209ENST00000474647 DDTP30046 118 aa8.32□□□□□ -1.08
CCDC78-209ENST00000474647 H3BRM9 83 aa8.31□□□□□ -1.08
CCDC78-209ENST00000474647 ZNF861PO60384 105 aa8.31□□□□□ -1.08
CCDC78-209ENST00000474647 DPM2O94777 84 aa8.31□□□□□ -1.08
CCDC78-209ENST00000474647 IGKCP01834 107 aa8.31□□□□□ -1.08
CCDC78-209ENST00000474647 PMCHL2Q9BQD1 86 aa8.31□□□□□ -1.08
CCDC78-209ENST00000474647 C20orf202A1L168 122 aa8.3□□□□□ -1.08
CCDC78-209ENST00000474647 SMIM1B2RUZ4 78 aa8.3□□□□□ -1.08
CCDC78-209ENST00000474647 CTAG1AP78358 180 aa8.3□□□□□ -1.08
CCDC78-209ENST00000474647 TMEM170BQ5T4T1 132 aa8.3□□□□□ -1.08
CCDC78-209ENST00000474647 PRSS2P07478 247 aa8.29□□□□□ -1.08
CCDC78-209ENST00000474647 C14orf144Q96I85 54 aa8.29□□□□□ -1.08
CCDC78-209ENST00000474647 VAMP8Q9BV40 100 aa8.29□□□□□ -1.08
CCDC78-209ENST00000474647 TOMM7Q9P0U1 55 aa8.29□□□□□ -1.08
CCDC78-209ENST00000474647 SPINK8P0C7L1 97 aa8.28□□□□□ -1.08
CCDC78-209ENST00000474647 PAM16Q9Y3D7 125 aa8.28□□□□□ -1.08
CCDC78-209ENST00000474647 IGLV5-39A0A0G2JS06 123 aa8.27□□□□□ -1.09
CCDC78-209ENST00000474647 TMEM223A0PJW6 202 aa8.27□□□□□ -1.09
CCDC78-209ENST00000474647 CKS1BP61024 79 aa8.27□□□□□ -1.09
CCDC78-209ENST00000474647 XAGE1AQ9HD64 81 aa8.27□□□□□ -1.09
CCDC78-209ENST00000474647 C22orf24Q9Y442 160 aa8.27□□□□□ -1.09
CCDC78-209ENST00000474647 A0A087X002 238 aa8.26□□□□□ -1.09
CCDC78-209ENST00000474647 Q8IZM0 81 aa8.26□□□□□ -1.09
CCDC78-209ENST00000474647 ATOH7Q8N100 152 aa8.26□□□□□ -1.09
CCDC78-209ENST00000474647 TYMSOSQ8TAI1 123 aa8.26□□□□□ -1.09
CCDC78-209ENST00000474647 FAT4Q6V0I7 4981 aa8.25□□□□□ -1.09
CCDC78-209ENST00000474647 SPATA45Q537H7 98 aa8.25□□□□□ -1.09
CCDC78-209ENST00000474647 LBHQ53QV2 105 aaPredicted RBP8.25□□□□□ -1.09
CCDC78-209ENST00000474647 MIEN1Q9BRT3 115 aa8.25□□□□□ -1.09
CCDC78-209ENST00000474647 RPL28P46779 137 aaKnown RBP8.24□□□□□ -1.09
CCDC78-209ENST00000474647 HERVK_113P61574 105 aa8.24□□□□□ -1.09
CCDC78-209ENST00000474647 C6orf226Q5I0X4 101 aa8.24□□□□□ -1.09
CCDC78-209ENST00000474647 COX7B2Q8TF08 81 aa8.24□□□□□ -1.09
CCDC78-209ENST00000474647 CRYGAP11844 174 aa8.23□□□□□ -1.09
CCDC78-209ENST00000474647 MRPL55Q7Z7F7 128 aaKnown RBP8.23□□□□□ -1.09
CCDC78-209ENST00000474647 RETNLBQ9BQ08 111 aa8.23□□□□□ -1.09
CCDC78-209ENST00000474647 BCE1O60756 84 aa8.22□□□□□ -1.09
CCDC78-209ENST00000474647 CXCL5P42830 114 aa8.22□□□□□ -1.09
CCDC78-209ENST00000474647 LCE2AQ5TA79 106 aaPredicted RBP8.22□□□□□ -1.09
CCDC78-209ENST00000474647 E9PLD3 99 aa8.21□□□□□ -1.1
CCDC78-209ENST00000474647 LEPROTO15243 131 aa8.21□□□□□ -1.1
CCDC78-209ENST00000474647 ANAPC11Q9NYG5 84 aa8.21□□□□□ -1.1
CCDC78-209ENST00000474647 RPL37AP8A6NKH3 93 aa8.2□□□□□ -1.1
CCDC78-209ENST00000474647 PLEKHB2Q96CS7 222 aa8.2□□□□□ -1.1
CCDC78-209ENST00000474647 TSPEAR-AS2P59090 65 aa8.19□□□□□ -1.1
CCDC78-209ENST00000474647 UQCR10Q9UDW1 63 aa8.19□□□□□ -1.1
CCDC78-209ENST00000474647 TP73-AS1Q9UF72 201 aa8.19□□□□□ -1.1
CCDC78-209ENST00000474647 GAGE10A6NGK3 116 aa8.18□□□□□ -1.1
CCDC78-209ENST00000474647 J3QQQ9 107 aa8.18□□□□□ -1.1
CCDC78-209ENST00000474647 ANKRD39Q53RE8 183 aa8.18□□□□□ -1.1
CCDC78-209ENST00000474647 SFTA2Q6UW10 78 aa8.18□□□□□ -1.1
CCDC78-209ENST00000474647 ZNF625Q96I27 306 aaPredicted RBP8.18□□□□□ -1.1
CCDC78-209ENST00000474647 SNHG12Q9BXW3 62 aa8.18□□□□□ -1.1
CCDC78-209ENST00000474647 KRTAP9-6A0A140TA67 174 aa8.17□□□□□ -1.1
CCDC78-209ENST00000474647 UBE2AP49459 152 aa8.17□□□□□ -1.1
CCDC78-209ENST00000474647 LINC00167Q96N53 147 aa8.17□□□□□ -1.1
CCDC78-209ENST00000474647 CDIP1Q9H305 208 aa8.17□□□□□ -1.1
CCDC78-209ENST00000474647 IGKV2D-26A0A0A0MRZ7 120 aa8.16□□□□□ -1.1
CCDC78-209ENST00000474647 HSBP1L1C9JCN9 74 aa8.16□□□□□ -1.1
CCDC78-209ENST00000474647 M0R143 59 aa8.16□□□□□ -1.1
CCDC78-209ENST00000474647 LGALS3P17931 250 aaKnown RBP8.16□□□□□ -1.1
CCDC78-209ENST00000474647 NMUP48645 174 aa8.16□□□□□ -1.1
CCDC78-209ENST00000474647 KRTAP13-2Q52LG2 175 aa8.16□□□□□ -1.1
CCDC78-209ENST00000474647 LINC00304Q8N9R0 145 aa8.16□□□□□ -1.1
CCDC78-209ENST00000474647 MUC17Q685J3 4493 aa8.15□□□□□ -1.1
CCDC78-209ENST00000474647 NDUFA12Q9UI09 145 aa8.15□□□□□ -1.1
CCDC78-209ENST00000474647 MYMXA0A1B0GTQ4 84 aa8.14□□□□□ -1.11
CCDC78-209ENST00000474647 HERV-K104P63124 156 aa8.14□□□□□ -1.11
CCDC78-209ENST00000474647 NKAPP1Q8N9T2 125 aa8.14□□□□□ -1.11
CCDC78-209ENST00000474647 A0A1B0GV90 55 aa8.13□□□□□ -1.11
CCDC78-209ENST00000474647 TPRXLQ17RH7 258 aa8.12□□□□□ -1.11
CCDC78-209ENST00000474647 TTTY13Q9BZ97 58 aa8.12□□□□□ -1.11
CCDC78-209ENST00000474647 IGLV7-46A0A075B6I9 117 aa8.11□□□□□ -1.11
CCDC78-209ENST00000474647 IGKV2-28A0A075B6P5 120 aa8.11□□□□□ -1.11
CCDC78-209ENST00000474647 ZNF815PA8K554 130 aa8.11□□□□□ -1.11
CCDC78-209ENST00000474647 IGKV2D-28P01615 120 aa8.11□□□□□ -1.11
CCDC78-209ENST00000474647 FAM229BQ4G0N7 80 aa8.11□□□□□ -1.11
CCDC78-209ENST00000474647 KRTAP13-1Q8IUC0 172 aa8.11□□□□□ -1.11
CCDC78-209ENST00000474647 ERG28Q9UKR5 140 aa8.11□□□□□ -1.11
CCDC78-209ENST00000474647 COX17Q14061 63 aa8.1□□□□□ -1.11
CCDC78-209ENST00000474647 SLC25A34Q6PIV7 304 aa8.1□□□□□ -1.11
CCDC78-209ENST00000474647 PCP2Q8IVA1 136 aa8.1□□□□□ -1.11
CCDC78-209ENST00000474647 PRLHP81277 87 aa8.09□□□□□ -1.11
CCDC78-209ENST00000474647 MEIG1Q5JSS6 88 aa8.09□□□□□ -1.11
CCDC78-209ENST00000474647 IGLV5-37A0A075B6J1 123 aa8.08□□□□□ -1.12
CCDC78-209ENST00000474647 A0A0J9YXY3 114 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms