RNA–Protein interactions for RNA: ENST00000474254.5

CPA4-205, Transcript of carboxypeptidase A4, humanhuman

TSL 1 (best)

Gene CPA4, Length 1,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-205ENST00000474254 RPL24P83731 157 aaKnown RBP9.68□□□□□ -0.86
CPA4-205ENST00000474254 Q8NDZ9 215 aa9.68□□□□□ -0.86
CPA4-205ENST00000474254 LEPROTL1O95214 131 aa9.66□□□□□ -0.86
CPA4-205ENST00000474254 UBE2AP49459 152 aa9.66□□□□□ -0.86
CPA4-205ENST00000474254 LINC00158P58513 81 aa9.66□□□□□ -0.86
CPA4-205ENST00000474254 COLCA2A8K830 154 aa9.65□□□□□ -0.86
CPA4-205ENST00000474254 H0Y8G0 127 aa9.65□□□□□ -0.86
CPA4-205ENST00000474254 A0A087X002 238 aa9.64□□□□□ -0.87
CPA4-205ENST00000474254 TMEM126AQ9H061 195 aa9.64□□□□□ -0.87
CPA4-205ENST00000474254 A0A0U1RRA0 63 aa9.63□□□□□ -0.87
CPA4-205ENST00000474254 TMEM238C9JI98 176 aa9.63□□□□□ -0.87
CPA4-205ENST00000474254 HERV-K104P63124 156 aa9.63□□□□□ -0.87
CPA4-205ENST00000474254 SMIM13P0DJ93 91 aa9.62□□□□□ -0.87
CPA4-205ENST00000474254 NDUFA12Q9UI09 145 aa9.62□□□□□ -0.87
CPA4-205ENST00000474254 HSPB8Q9UJY1 196 aa9.62□□□□□ -0.87
CPA4-205ENST00000474254 M0R378 163 aa9.61□□□□□ -0.87
CPA4-205ENST00000474254 CRYGAP11844 174 aa9.61□□□□□ -0.87
CPA4-205ENST00000474254 PLNP26678 52 aa9.61□□□□□ -0.87
CPA4-205ENST00000474254 PRLHP81277 87 aa9.61□□□□□ -0.87
CPA4-205ENST00000474254 MEIG1Q5JSS6 88 aa9.61□□□□□ -0.87
CPA4-205ENST00000474254 A0A0U1RQV1 116 aa9.6□□□□□ -0.87
CPA4-205ENST00000474254 TSPEAR-AS2P59090 65 aa9.6□□□□□ -0.87
CPA4-205ENST00000474254 FAM19A1Q7Z5A9 133 aa9.6□□□□□ -0.87
CPA4-205ENST00000474254 MYMXA0A1B0GTQ4 84 aa9.59□□□□□ -0.87
CPA4-205ENST00000474254 ATP6V1G1O75348 118 aa9.59□□□□□ -0.87
CPA4-205ENST00000474254 FABP4P15090 132 aa9.59□□□□□ -0.87
CPA4-205ENST00000474254 MIR7-3HGQ8N6C7 128 aa9.59□□□□□ -0.87
CPA4-205ENST00000474254 LINC00587B1AMM8 73 aa9.58□□□□□ -0.88
CPA4-205ENST00000474254 LEPROTO15243 131 aa9.58□□□□□ -0.88
CPA4-205ENST00000474254 DPM2O94777 84 aa9.58□□□□□ -0.88
CPA4-205ENST00000474254 FAM229BQ4G0N7 80 aa9.58□□□□□ -0.88
CPA4-205ENST00000474254 PLEKHB2Q96CS7 222 aa9.58□□□□□ -0.88
CPA4-205ENST00000474254 BOD1L2Q8IYS8 172 aa9.57□□□□□ -0.88
CPA4-205ENST00000474254 TYMSOSQ8TAI1 123 aa9.57□□□□□ -0.88
CPA4-205ENST00000474254 ANAPC11Q9NYG5 84 aa9.57□□□□□ -0.88
CPA4-205ENST00000474254 J3QQQ9 107 aa9.56□□□□□ -0.88
CPA4-205ENST00000474254 TSPAN13O95857 204 aa9.56□□□□□ -0.88
CPA4-205ENST00000474254 IGKCP01834 107 aa9.56□□□□□ -0.88
CPA4-205ENST00000474254 KRTAP13-2Q52LG2 175 aa9.56□□□□□ -0.88
CPA4-205ENST00000474254 PMCHL2Q9BQD1 86 aa9.56□□□□□ -0.88
CPA4-205ENST00000474254 MAP1LC3CQ9BXW4 147 aa9.56□□□□□ -0.88
CPA4-205ENST00000474254 MUC2Q02817 5179 aa9.55□□□□□ -0.88
CPA4-205ENST00000474254 HERVK_113P61574 105 aa9.55□□□□□ -0.88
CPA4-205ENST00000474254 IGKV2D-26A0A0A0MRZ7 120 aa9.54□□□□□ -0.88
CPA4-205ENST00000474254 PRYO14603 147 aa9.54□□□□□ -0.88
CPA4-205ENST00000474254 NCR3O14931 201 aa9.54□□□□□ -0.88
CPA4-205ENST00000474254 HIST1H2BKO60814 126 aa9.53□□□□□ -0.88
CPA4-205ENST00000474254 HIST1H2BJP06899 126 aa9.53□□□□□ -0.88
CPA4-205ENST00000474254 HIST1H2BOP23527 126 aa9.53□□□□□ -0.88
CPA4-205ENST00000474254 HIST1H2BBP33778 126 aa9.53□□□□□ -0.88
CPA4-205ENST00000474254 NMUP48645 174 aa9.53□□□□□ -0.88
CPA4-205ENST00000474254 HIST1H2BDP58876 126 aa9.53□□□□□ -0.88
CPA4-205ENST00000474254 HIST1H2BCP62807 126 aa9.53□□□□□ -0.88
CPA4-205ENST00000474254 HIST2H2BEQ16778 126 aa9.53□□□□□ -0.88
CPA4-205ENST00000474254 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.53□□□□□ -0.88
CPA4-205ENST00000474254 HIST1H2BHQ93079 126 aa9.53□□□□□ -0.88
CPA4-205ENST00000474254 HIST1H2BNQ99877 126 aa9.53□□□□□ -0.88
CPA4-205ENST00000474254 HIST1H2BMQ99879 126 aa9.53□□□□□ -0.88
CPA4-205ENST00000474254 LOC107984156A0A0G2JMH3 177 aa9.52□□□□□ -0.89
CPA4-205ENST00000474254 ARL17AQ8IVW1 177 aa9.52□□□□□ -0.89
CPA4-205ENST00000474254 HIGD2AQ9BW72 106 aa9.52□□□□□ -0.89
CPA4-205ENST00000474254 LGALS3P17931 250 aaKnown RBP9.51□□□□□ -0.89
CPA4-205ENST00000474254 SPRR1AP35321 89 aa9.51□□□□□ -0.89
CPA4-205ENST00000474254 DAND5Q8N907 189 aa9.51□□□□□ -0.89
CPA4-205ENST00000474254 KCNQ1DNQ9H478 68 aa9.51□□□□□ -0.89
CPA4-205ENST00000474254 LINC00337Q8N6G1 96 aa9.5□□□□□ -0.89
CPA4-205ENST00000474254 TRBV10-3A0A0K0K1G6 114 aa9.49□□□□□ -0.89
CPA4-205ENST00000474254 E9PLD3 99 aa9.48□□□□□ -0.89
CPA4-205ENST00000474254 KRTAP4-16G5E9R7 235 aaPredicted RBP9.48□□□□□ -0.89
CPA4-205ENST00000474254 SYS1-DBNDD2H3BUS1 97 aa9.48□□□□□ -0.89
CPA4-205ENST00000474254 TRBV10-2A0A0K0K1G8 114 aa9.47□□□□□ -0.89
CPA4-205ENST00000474254 LINC00304Q8N9R0 145 aa9.47□□□□□ -0.89
CPA4-205ENST00000474254 SPRR4Q96PI1 79 aa9.47□□□□□ -0.89
CPA4-205ENST00000474254 ETDCA0A1B0GVM5 59 aa9.46□□□□□ -0.9
CPA4-205ENST00000474254 MIEN1Q9BRT3 115 aa9.46□□□□□ -0.9
CPA4-205ENST00000474254 S100A12P80511 92 aa9.45□□□□□ -0.9
CPA4-205ENST00000474254 SPANXB1Q9NS25 103 aaPredicted RBP9.45□□□□□ -0.9
CPA4-205ENST00000474254 ZNF706Q9Y5V0 76 aaPredicted RBP9.45□□□□□ -0.9
CPA4-205ENST00000474254 A0A0J9YXY3 114 aa9.44□□□□□ -0.9
CPA4-205ENST00000474254 NDUFC2O95298 119 aa9.44□□□□□ -0.9
CPA4-205ENST00000474254 LINC01545Q5VT33 79 aa9.44□□□□□ -0.9
CPA4-205ENST00000474254 C3orf22Q8N5N4 141 aa9.44□□□□□ -0.9
CPA4-205ENST00000474254 DDTP30046 118 aa9.43□□□□□ -0.9
CPA4-205ENST00000474254 COA6Q5JTJ3 125 aaKnown RBP9.42□□□□□ -0.9
CPA4-205ENST00000474254 PET117Q6UWS5 81 aa9.42□□□□□ -0.9
CPA4-205ENST00000474254 SOSTDC1Q6X4U4 206 aa9.42□□□□□ -0.9
CPA4-205ENST00000474254 SMCR5Q8TEV8 140 aa9.42□□□□□ -0.9
CPA4-205ENST00000474254 FAT4Q6V0I7 4981 aa9.42□□□□□ -0.9
CPA4-205ENST00000474254 B5MCH6 92 aa9.41□□□□□ -0.9
CPA4-205ENST00000474254 EIF4EBP3O60516 100 aaPredicted RBP9.41□□□□□ -0.9
CPA4-205ENST00000474254 CTAG1AP78358 180 aa9.41□□□□□ -0.9
CPA4-205ENST00000474254 ADAMTSL4-AS1Q5T5F5 129 aa9.41□□□□□ -0.9
CPA4-205ENST00000474254 IGLV6-57P01721 117 aa9.4□□□□□ -0.9
CPA4-205ENST00000474254 RETNLBQ9BQ08 111 aa9.4□□□□□ -0.9
CPA4-205ENST00000474254 MUC17Q685J3 4493 aa9.4□□□□□ -0.9
CPA4-205ENST00000474254 C3orf79P0CE67 100 aa9.39□□□□□ -0.91
CPA4-205ENST00000474254 NPC2P61916 151 aa9.39□□□□□ -0.91
CPA4-205ENST00000474254 LITAFQ99732 161 aa9.39□□□□□ -0.91
CPA4-205ENST00000474254 KRTAP9-2Q9BYQ4 174 aa9.39□□□□□ -0.91
CPA4-205ENST00000474254 S100A7L2Q5SY68 101 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms